Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20fujikuroi_20[genbank_20GCA_5F001023035.1_202015-06-09] 187 sequences; 43,110,459 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq179 192 6e-44 seq145 118 1e-21 seq27 113 5e-20 seq80 111 2e-19 >seq179 Length=1646338 Score = 192 bits (212), Expect = 6e-44 Identities = 377/552 (68%), Gaps = 9/552 (2%) Strand=Plus/Plus Query 132894 GCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAA 132953 ||| |||||||| || | |||||||| | || ||||| ||||| ||| |||| Sbjct 1575820 GCAGGCAAAGTCAGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTAGAGAAGGTCAG 1575879 Query 132954 GCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAA 133013 || |||||||| || || || |||||||| || |||| |||||| || ||||| Sbjct 1575880 ACCAGGCATGAGACCACGCTTCTTGAGCCAGAAAATGGAGGCGAAGGCACCACTGAAGAA 1575939 Query 133014 GACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTG-CTGG 133072 || ||||| ||||| |||||||| || ||||| | | | || | | || || || | Sbjct 1575940 GATACCCTCAACGGCAGCGAAAGCAACGAGGCGTTGGGCAAAGGAAGAGTCCTTATCTTG 1575999 Query 133073 CGATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCGATGGCGT 133132 |||||| || | ||||| || ||||| | | || ||| || || || || ||||||| Sbjct 1576000 -GATCCATCGGATGGCCCAGTCAGCCTTCTTTCGGATGCAGGGAATGGTCTCAATGGCGT 1576058 Query 133133 TCAACAAACGGAGTTTCTCTTCCGAGGAACGC--ACGTAGGTGTCGATGAGGGTCGAATA 133190 | || || | || ||| || || | | ||||||||||||||| || || Sbjct 1576059 TGAA--AAGGTAGGTTCGCTGGGCGGGCTCCTTGATATAGGTGTCGATGAGGAGGGAGTA 1576116 Query 133191 CATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCGAC 133250 | || ||||| | ||||||||| ||| || |||||||| || || || |||||| Sbjct 1576117 GGTCTCGGAGTGAATGTTCTCCATCATGATCTGGAAGCCGTAGAAACAACGAGCCTCGGG 1576176 Query 133251 CACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGCTGGC 133310 | ||| || || | ||| |||||||| || || |||||||| || || || ||| Sbjct 1576177 GATCTGGACCTCGCCACTGAATCGCTCGACGAGGTTCTCGTTGACAATACCATCAGAGGC 1576236 Query 133311 GGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAAGCG---CTC 133367 ||||| || || || | ||| || ||| |||| | | | ||| ||| | Sbjct 1576237 AGCGAAGAAAGCAAGGATGTGAGAGACGAAGAACTGCTCATCGGCAGTCAGGCGGTTGTT 1576296 Query 133368 CCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGC 133427 ||||||| | ||||| || ||||| | |||||| | ||||| || || ||||| || Sbjct 1576297 CCAGTCGTGGAGATCCTTAGAGAGGTCAATCTCCTCAGCAGTCCAGAAGGAAGCCTCAGC 1576356 Query 133428 TTTTTTGTACAT 133439 || |||||||| Sbjct 1576357 CTTCTTGTACAT 1576368 >seq145 Length=1022755 Score = 118 bits (130), Expect = 1e-21 Identities = 159/219 (73%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 || ||||| || ||||| || || |||||||| || || |||||| | || || ||| | Sbjct 404275 AAGATGCAGATTTTCGTCAAGACCCTCACGGGGAAGACGATCACCCTTGAGGTGGAGTCT 404334 Query 38301 ACCGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGA 38359 |||||| | | | |||| | || || |||| ||||| ||||| || ||| | || Sbjct 404335 TCCGACACCATCGACAACG-TCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCTGA 404393 Query 38360 CCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419 ||| ||||| || || | || ||||| ||||| || || | |||||||| | |||||| Sbjct 404394 CCAGCAGCGCCTGATCTTTGCTGGCAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTA 404453 Query 38420 CAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 ||||||||| ||||| | || || || |||| || || Sbjct 404454 CAACATCCAGAAGGAGTCCACCCTCCACCTGGTCCTCCG 404492 >seq27 Length=3261259 Score = 113 bits (124), Expect = 5e-20 Identities = 151/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 38249 AATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAG 38308 |||| |||| || || ||||| ||||| |||||||| |||| |||||| | |||| | Sbjct 1153901 AATAGTCGTCAAGACCCTCACTGGCAAGACCATCACTCTCGAGGTCGAGTCGTCCGATAC 1153842 Query 38309 CGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCG 38368 | | | | |||| || |||| ||||| ||||| || || | ||||| ||||| Sbjct 1153841 CATCGACAATGTTAAGTCGAAGATCCAGGACAAGGAGGGTATCCCTCCTGACCAGCAGCG 1153782 Query 38369 GCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCA 38428 || |||| || || || || ||||| |||| || ||||| ||||||||||||||| Sbjct 1153781 TCTGATTTTTGCTGGAAAGCAACTGGAAGACGGCCGAACCCTTGCCGACTACAACATCCA 1153722 Query 38429 AAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 |||||| | || || ||| | || || || Sbjct 1153721 GAAGGAATCTACCCTTCATCTCGTCCTCCG 1153692 Score = 109 bits (120), Expect = 5e-19 Identities = 157/218 (72%), Gaps = 4/218 (2%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || || || || || || ||||| || | || |||||| | || Sbjct 1153678 ATGCAAATCTTCGTCAAGACCCTTACTGGAAAGACCATTACTCTGGAAGTCGAGTCATCC 1153619 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 || | | | | || | | |||| || |||| ||||| ||||| ||||| | || | Sbjct 1153618 GATACCATTGATAATG--TGAAGAGCAAGATCCAGGACAAGGAGGGTATTCCTCCGGATC 1153561 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 ||||||| ||||| | || ||||| || || || || | || || || |||||||| Sbjct 1153560 AACAGCGACTCATCTTTGCTGGCAAGCAACTTGAGGATGGCCGAACTCTTTCCGACTACA 1153501 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||||||| |||||| | || || || |||||||| ||| Sbjct 1153500 ACATCCAGAAGGAATCTACTCTCCACTTGGTGCTCCGT 1153463 Score = 82.4 bits (90), Expect = 8e-11 Identities = 136/193 (70%), Gaps = 4/193 (2%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || || || || || |||||||| | || || ||| | | Sbjct 1153450 ATGCAGATTTTCGTGAAGACTCTGACTGGAAAGACCATCACTCTTGAGGTTGAGTCTAGT 1153391 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 |||| | | |||| | |||| || || | || || ||||| || ||| | || | Sbjct 1153390 GACACTATCGACAACG--TGAAGAGCAAGATTCAGGATAAGGAGGGTATCCCCCCTGATC 1153333 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | ||||| || || | ||| || || ||| |||| || | |||||| | | |||||||| Sbjct 1153332 AGCAGCGTCTTATCTTCGCTGGTAAGCAGTTGGAAGATGGTCGCACCTTGAGCGACTACA 1153273 Query 38422 ACATCCAAAAGGA 38434 ||||||| ||||| Sbjct 1153272 ACATCCAGAAGGA 1153260 >seq80 Length=892031 Score = 111 bits (122), Expect = 2e-19 Identities = 133/181 (73%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312 ||||| || || || |||||||| ||||||||| |||| |||||| || | |||| | | Sbjct 766089 TTCGTGAAGACCCTGACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTCGGACACCATC 766030 Query 38313 CAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTC 38372 | | | || || |||| ||||| ||||| |||||| | ||||||||||| || Sbjct 766029 GACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAACAGCGACTG 765970 Query 38373 ATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAG 38432 || | ||| || || || || || || | || || ||| ||||||||||||||| ||| Sbjct 765969 ATCTTCGCTGGTAAGCAACTCGAGGATGGCCGAACTCTCTCCGACTACAACATCCAGAAG 765910 Query 38433 G 38433 | Sbjct 765909 G 765909 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500171630846080