Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20fujikuroi_20[genbank_20GCA_5F001023035.1_202015-06-09] 187 sequences; 43,110,459 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq85 347 2e-90 seq12 86.0 8e-12 >seq85 Length=1202620 Score = 347 bits (384), Expect = 2e-90 Identities = 995/1529 (65%), Gaps = 27/1529 (2%) Strand=Plus/Minus Query 6569 TCATCTTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTTCGAT 6628 ||||| || || || ||||| || ||||| | | ||| || || || || || || Sbjct 1183093 TCATCCTCCTCCTTGTACTTCTCAGCATCGTTAAGCATGCGCTCGATCTCCTCCTTGGAC 1183034 Query 6629 AATCTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTATCTTCA 6688 | | ||||| ||||| ||||| |||||| | ||| || || | | |||| || | Sbjct 1183033 AGGCGGCCCTTGTCATTGGTAATGACAATCTTGTTGGACTTGCCAGTGCCCTTCTCGACG 1182974 Query 6689 GCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTA 6748 || || |||| ||||| || ||||||| |||||| | || | |||||| || | Sbjct 1182973 GCGGAGACGTTCATGATACCGTTGGCATCAAGATCGAAGGTGACCTCAATTTGGGGAACA 1182914 Query 6749 CCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGTC 6808 || | || || | || ||||| || | || || | || | | |||| ||| | Sbjct 1182913 CCACGGGGGGCAGGAGGGATACCAGTGAGCTCGAACTTGCCCATGAGGTTGTTGTCCTTG 1182854 Query 6809 GCCTTCTTACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTGTGCC 6868 | | ||| ||||| || ||||| | || || |||| || || ||| Sbjct 1182853 GTGCGTTGACGCTCACCCTCGTAGACCTGGATAAGAACACCAGGCTGGTTGTCTGAGAAG 1182794 Query 6869 GTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGTC 6928 || ||||||| | ||||| | || || || || || | || |||| | |||| Sbjct 1182793 GTGGAGAAGACCTCGGACTTCTTGGTAGGGATGGTGGTGTTGCGGGGGATAAGCTTGGTC 1182734 Query 6929 ATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGG 6988 || |||||||| || |||| || ||||| ||||| | || || ||| | |||| Sbjct 1182733 ATCATACCACCAGCGGTCTCGATACCGAGAGAGAGAGGGGCGACATC---GAGAAGCAGG 1182677 Query 6989 -TCTTGAACAGATTCGTTCCCTT-----------CACCCGTTAAGATGGCGGCTTGGACC 7036 ||| | || || |||| |||| | | || ||||| ||||| Sbjct 1182676 ATCTCG------TTGGTGGCCTTGCTGGAGGTGTCACCTGAGAGAATCGCGGCCTGGACG 1182623 Query 7037 GTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTA 7096 | || ||||| || || |||||||||||||| || | || || | || || ||||| Sbjct 1182622 GCAGCACCGTAGGCAACAGCCTCATCGGGGTTGATGGACTTGTTGGGCTCCTTTCCGTTG 1182563 Query 7097 AAATAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACG 7156 || ||||| | | | | || | ||||| || || ||||||||||| | || Sbjct 1182562 AAGTAATCGGTGATGAGCTTCTGGACACGGGGGATACGAGTAGATCCACCGACGAGGACA 1182503 Query 7157 ATTTCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCC 7216 || || | || || || |||||||| | ||| ||| ||||| || | Sbjct 1182502 ATCTCGTGGACGAGGGACTTGTCGATCTTGGCGTCGGTAAGGACACGGTCGACGGGCTGG 1182443 Query 7217 ATACATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTA 7276 ||| ||||| | ||| || || ||||| ||||| |||||||| ||||| || Sbjct 1182442 ATAGTGGATCGGAAAAGATCCTGGCAGAGCTCCTCGAAACGAGCACGGGTGATGGAGGTG 1182383 Query 7277 TAGAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGAT 7336 ||||| |||| || ||| | | || ||||| || || | || || || | ||||| Sbjct 1182382 TAGAAGTCAATACCCTCGAAGAGAGAGTCAATCTCGATCGAGGTCTGAGCAGAGGAAGAA 1182323 Query 7337 AACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCG 7396 | |||||||| || ||||| || || ||||| | ||| || ||||| || ||| | Sbjct 1182322 AGTGTTCGCTTGGCACGCTCGCAAGCAGTTCGGAGACGTCGCAGGGCGCGGACGTTGGTG 1182263 Query 7397 GAAATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAA 7456 | ||| ||||| || || | || || || | |||||| | || | Sbjct 1182262 CTCAAATCCTTCTTGTGCTTTCTCTTGAATTCATTTACGAAGTGGTTGACCAGACGGTTG 1182203 Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 ||||| || |||||||||||||| || || || || || | ||||| || |||||||| Sbjct 1182202 TCGAAGTCCTCACCACCCAAGTGAGTGTCACCGGCAGTAGACTTGACCTCGAAGATACCC 1182143 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 | |||||| | | | || ||||| || ||||||||||| || || || || || ||| Sbjct 1182142 TCCTCAATGGTAAGGAGAGACACATCGAAGGTACCACCACCAAGATCGAAGATCAGGACG 1182083 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 || ||| | || ||||| || |||||||| || || || || || || || || Sbjct 1182082 TTGCGCTCGCCCTCAACCTTCTTGTCAAGACCGTAGGCAATGGCGGCAGCAGTAGGCTCG 1182023 Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696 || ||||| || ||| ||| || || || || | ||||| || || ||||| || Sbjct 1182022 TTGATAATTCGGAGAACGTTGAGACCGGCGATGAGACCAGCATCCTTGGTGGCTTGACGC 1181963 Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGA 7756 || |||||||| |||||||| ||||| || || || |||| |||| ||| ||||| Sbjct 1181962 TGAGAATCGTTGAAGTAGGCAGGGACAGTAACAACGGCGTTGTTGACAGTCTCGCCGAGG 1181903 Query 7757 TACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCA 7816 || || || ||| | || ||| ||||| || | ||| | || ||||| || | | Sbjct 1181902 TAAGACTCAGCGGTCTCACGCATCTTGGTGAGGATCATAGCAGAGATCTCCTCGGGGGTG 1181843 Query 7817 AACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGG 7876 || || || || || || || || || || || |||| ||| || | | | Sbjct 1181842 AAAGTCTTGGTCTCGCCCTTGAACTCGACCTCGATGTTGGGCTTA---CCACCCTTGTCG 1181786 Query 7877 ATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTT 7936 | | ||| | | | | ||||||||| | || |||| |||| | ||||| | Sbjct 1181785 ACGATCTTGAAGGGGAAGTGCTTCATATCGGCCTGAACCTCAGGGTCGGCGAACTTGCGA 1181726 Query 7937 CCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTC 7996 ||||| | ||||| || || || || ||||| | ||||||||| || ||||||||| Sbjct 1181725 CCGATCAATCGCTTGGCGTCGAAGACAGTGTTCTGGGGGTTCATAGCGACTTGGTTCTTG 1181666 Query 7997 GCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTT 8056 || || || || || ||||| || | || || || ||||| | || ||||| ||| Sbjct 1181665 GCGGCATCACCAATCAGACGCTC---GGTGTCGGTGAAACCGACGAATGAGGGGGTAGTT 1181609 Query 8057 CGATTCCCTTGGTCGTTCGCAATAATTTC 8085 || || || |||||||| || || || || Sbjct 1181608 CGGTTACCCTGGTCGTTGGCGATGATATC 1181580 >seq12 Length=2424651 Score = 86.0 bits (94), Expect = 8e-12 Identities = 166/243 (68%), Gaps = 3/243 (1%) Strand=Plus/Plus Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515 ||||||||| |||||||| | || || || || ||||| || ||| || ||||| || Sbjct 925478 ATCGAAATCCTCACCACCGAGATGGGTGTCACCAGCGGTAGCCAGGACCTCGAAGATGCC 925537 Query 7516 TCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTAC 7575 | ||||| | | || ||||| || ||||||||||| || || | | || | Sbjct 925538 GTCATCAATAGAGAGAAGGGAGACATCGAAGGTACCACCACCGAGATCGTAGACGATGA- 925596 Query 7576 GTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTC 7635 || || | || | | | |||| || |||||||| |||||||| || || || || || Sbjct 925597 -TTTGTCGC-TCACCATCGGTCTTGTCAAGACCGTAGGCGATAGCGGCGGCGGTGGGCTC 925654 Query 7636 ATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCG 7695 || | || || ||| ||| || || ||||| | | ||||| || || || ||||| Sbjct 925655 GTTGACGATTCGGAGAACGTTGAGACCGGCAATGATACCGGCATCCTTGGTGGCCTGTCG 925714 Query 7696 TTG 7698 || Sbjct 925715 CTG 925717 Score = 86.0 bits (94), Expect = 8e-12 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 7704 CGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATT 7763 |||| |||||||| ||||| || ||||| |||| ||||| ||||||||||| || | Sbjct 925773 CGTTGAAGTAGGCGGGGACGGTAACGACGGCGTGGGTGACCTTCTTACCGAGGTAGCCCT 925832 Query 7764 CCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGTT 7823 | |||| || ||||| ||| ||||||||| | || ||||| |||| | ||||| | Sbjct 925833 CAGCGACCTCCTTCATCTTGCCAAGAACCATAGCAGAGATCTCCTCAGGAGTGAACTGCT 925892 Query 7824 TC 7825 || Sbjct 925893 TC 925894 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635131315377080