Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20fujikuroi_20[genbank_20GCA_5F001023035.1_202015-06-09] 187 sequences; 43,110,459 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq27 131 2e-25 >seq27 Length=3261259 Score = 131 bits (144), Expect = 2e-25 Identities = 325/485 (67%), Gaps = 15/485 (3%) Strand=Plus/Plus Query 159304 CAACCTAACGCAGGATCACAGGGTGAGTATGCAGGACTGTTAGCA--ATCCAAGCATACC 159361 || || ||| | || | ||||| |||| ||| || || | || ||| | || |||| Sbjct 2677832 CAGCCCAACTCTGGTGCTCAGGGCGAGTTTGCTGGTCT--TCGCTGTATCAAGGCTTACC 2677889 Query 159362 ATCAAGGATCAGGA-GATGATAAAAGAAATGTATGTTTGATACCAGAGTCAGCACATGGA 159420 | | ||| || || | ||||| |||| || || | || |||| || || || || Sbjct 2677890 A-CGAGGCTCGTGATGGAGATAAGCGAAAGGTCTGCCTTATCCCAGTTTCTGCTCACGGT 2677948 Query 159421 ACTAATCCTGCATCAGCAGTGATGGCAGGGATGAAAGTTGTAGGTGTCAAGTGTGATG-- 159478 || || ||||| || || | ||||| || ||||| ||||| |||||||||||| | Sbjct 2677949 ACCAACCCTGCTTCTGCTGCCATGGCTGGCATGAAGGTTGTTACTGTCAAGTGTGACGGC 2678008 Query 159479 ATGA-TGGCAACATAGACATCAAAGATCTAGAG---AAGAAAGCAATCATGAATACATTT 159534 | || ||| ||| | || ||| | ||||| || ||| || || | | | | Sbjct 2678009 AAGACTGGTAACCTGGATATCGAGGATCTCAAGGCCAAGTGTGC---CAAGCACGCTGAT 2678065 Query 159535 GAACTGTCATGTATTATGATTACATATCCATCTACACATGGTGTATTTGAAACAAACATC 159594 || || | ||| ||| |||| ||||| ||||| ||||| || || | | ||| Sbjct 2678066 GAGCTTGCTGCTATCATGGTTACTTATCCCTCTACTTTCGGTGTCTTCGAGCCTGAGATC 2678125 Query 159595 AGACAGATATGTAAGATTGTTCATGAGAATGGTGGTCAGGTATATCTTGATGGTGCAAAT 159654 | || | ||| | |||| || ||| |||| |||| || || | || ||||| || Sbjct 2678126 AAGCAAGTCTGTGATCTTGTCCACGAGCATGGCGGTCTTGTCTACATGGACGGTGCCAAC 2678185 Query 159655 CTAAATGCACAGGTAGGTCTAGCAAAACCATGTGACTATGGTGCAGATGTATGTCATCTA 159714 | || || ||| | ||||| | || ||||| |||||| ||||| || ||||| Sbjct 2678186 ATGAACGCTCAGATTGGTCTCTGCAGCCCCGGTGACATTGGTGCTGATGTCTGCCATCTC 2678245 Query 159715 AACTTACATAAGACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATT 159774 ||| | || ||||| ||||||||||| || || || || |||||||| || || ||||| Sbjct 2678246 AACCTCCACAAGACCTTCTGTATTCCCCACGGCGGCGGCGGTCCTGGTGTTGGCCCTATC 2678305 Query 159775 GGTGT 159779 | ||| Sbjct 2678306 GCTGT 2678310 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588049825430320