Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20fujikuroi_20[genbank_20GCA_5F001023035.1_202015-06-09] 187 sequences; 43,110,459 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq179 102 9e-17 >seq179 Length=1646338 Score = 102 bits (112), Expect = 9e-17 Identities = 269/411 (65%), Gaps = 0/411 (0%) Strand=Plus/Plus Query 18961 CATGCAAAATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAA 19020 || ||||| ||| || || |||||||| | | || | || ||||| || || | | Sbjct 1575821 CAGGCAAAGTCAGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTAGAGAAGGTCAGA 1575880 Query 19021 CCAGGCATCAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAAT 19080 |||||||| || || | || || | |||||| || || || || | ||| ||||| Sbjct 1575881 CCAGGCATGAGACCACGCTTCTTGAGCCAGAAAATGGAGGCGAAGGCACCACTGAAGAAG 1575940 Query 19081 ATACCTTCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCATTATTATGA 19140 ||||| || || || || |||||||| || | || || | || || |||| || Sbjct 1575941 ATACCCTCAACGGCAGCGAAAGCAACGAGGCGTTGGGCAAAGGAAGAGTCCTTATCTTGG 1576000 Query 19141 ATCCATTTCAGTGCCCAATCAGCCTTCTTTTTTACACATGGCATTGTCTCTATAGAATTA 19200 |||||| | ||||| |||||||||||| | || || || ||||| || | || Sbjct 1576001 ATCCATCGGATGGCCCAGTCAGCCTTCTTTCGGATGCAGGGAATGGTCTCAATGGCGTTG 1576060 Query 19201 AATAGATACATACGCTCATCTGTATCTTTAACATATGCATCTATCAATAAACTGTACATT 19260 || || || | |||| | | || || | ||| | || || | | ||| | Sbjct 1576061 AAAAGGTAGGTTCGCTGGGCGGGCTCCTTGATATAGGTGTCGATGAGGAGGGAGTAGGTC 1576120 Query 19261 TCTGAATGAATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCTGTTATC 19320 || || ||||| || || || ||||| || ||||| ||||| | || || | ||| Sbjct 1576121 TCGGAGTGAATGTTCTCCATCATGATCTGGAAGCCGTAGAAACAACGAGCCTCGGGGATC 1576180 Query 19321 TGTACTTCACTACAAAATCTTTCGACCAAATTTTCATTAACTATTCCATCA 19371 || || || | || |||| ||||| | || || || || || |||||| Sbjct 1576181 TGGACCTCGCCACTGAATCGCTCGACGAGGTTCTCGTTGACAATACCATCA 1576231 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562107486070680