Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20fujikuroi_20[genbank_20GCA_5F001023035.1_202015-06-09] 187 sequences; 43,110,459 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq162 351 2e-91 seq179 192 1e-43 >seq162 Length=1634208 Score = 351 bits (388), Expect = 2e-91 Identities = 1232/1890 (65%), Gaps = 104/1890 (6%) Strand=Plus/Plus Query 212553 ACCGTAAACTGTACTGGATCAGCAGCAGCCTTGGTGCGTAGATAGTACATGCCGGTCTTT 212612 || || ||||| | ||| |||||||||||| || || || ||||||||||| ||||| Sbjct 856565 ACAGTGAACTGAATAGGAGCAGCAGCAGCCTGTGTACGAAGGTAGTACATGCCAGTCTTG 856624 Query 212613 AGGCC---CTTGCCCCAGCCGTGCAT-GTGCATTGCTG-TGAGTTTCTTCAGCTTAATAT 212667 ||||| ||| |||||| |||| |||||| |||| ||| |||| | || Sbjct 856625 AGGCCAAGCTT---CCAGCC-TGCAAAGTGCAT-GCTGGTGA---TCTTGCCC---ATCG 856673 Query 212668 TCTGGTCATCCTCGTGGCCCAGATGTAGGTTCAGGGACTGACTCTGGTCTATGAATGGGG 212727 | |||| | | |||| | |||||| ||||| ||| || ||||| | Sbjct 856674 TGGGGTCCTTCATGTGG---------ATGTTCAGTGACTGGGACTGATCAATGAAGGCAC 856724 Query 212728 CCCTGTCAGCGGCCATGTCTATGATATCTCTCTGGGAGAGCTCCCACACGGTCTTGAAGA 212787 | | ||||| ||||| | | || | | ||| |||| |||||| || ||||| | | Sbjct 856725 CTCGATCAGCAGCCATCTGGACGACCTGGCGCTGAGAGATCTCCCAAACAGTCTTATACA 856784 Query 212788 TTTCTTTGAGGTCCTCTGGGAAGCCGGGGATGTTCTGCACAGACCCCCTGTGTATGGTCA 212847 | |||| || | |||| | ||| |||||||| | || || || ||| Sbjct 856785 GAGCCTTGACATCGGCAGGGATGTTGGGAATGTTCTGAATGGATCC-------ATTCTCA 856837 Query 212848 GC--TGCAGGCG------CATGTCCTCGTTCCAGAGGCCCCTGGTCTCCAGGCACTTGAC 212899 || || | ||| ||| | ||| ||| || ||| || | ||| ||||| Sbjct 856838 GCAATG-ATGCGGTTCTTCATAGCATCGGACCACAGACCCATGTCGACAAGGTCCTTGAG 856896 Query 212900 CAGGTGAGGGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGA 212959 ||| |||||||| | |||||| ||||| | ||| || | | ||||| | || || Sbjct 856897 CAGCCAGGGGTTGACAACCTGGAACTCACCAGCGAGAACACGGCGTTGGTAGATATTGGA 856956 Query 212960 AGTGTAGGGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCAT 213019 ||||||||||||| || ||||||||| ||||||||||| | || ||||| || ||||| Sbjct 856957 GGTGTAGGGCTCGAAGCACTCGTTGTTGCCCAGAATCTGGGAGGTACTGGCAGTAGGCAT 857016 Query 213020 GGGAGCCACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAGGCGC---CGAAGC-T 213075 ||||| | || |||||||| | | ||||| | | ||| | ||||| | Sbjct 857017 AGGAGCAAGGAGTAGACTGTTGCGGATGCCGTGT--GTCT-TGACTTCCTCTCGAAGAGT 857073 Query 213076 CTGCCCAGTCCCATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCA 213135 || |||||||||| | |||| | ||| |||||||||||||| ||||| | Sbjct 857074 CT-CCCAGTCCCAGAGGTCAGAGGG---------CTTGACGTTCCACATGTCGAACTGGA 857123 Query 213136 AGATGCCTTTGCTCA----CGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTG 213191 || || |||| ||||| |||| | | | ||||||||| || | ||||| Sbjct 857124 GAATACC----CTCAGAGGCGGGGGAACCCTTGAAGGTGGAGTAGGGACCCTCTTCCTTA 857179 Query 213192 GCCAGCTCGCA-GGACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTT 213250 ||||||| ||| ||| || ||| ||||||| || ||||| ||||| |||| | | || Sbjct 857180 GCCAGCT-GCACGGAGGCAGTCAGCGCAGCGTGATAAATGGTCTCAAAAATCTGCTTATT 857238 Query 213251 GAGCTTCTTGGCCTCTGGGGACGTGAAGGGCATCATCATGCGTTGGAACACATCAGCCAG 213310 ||||| ||||| |||||| ||||||||| || |||| |||| || || Sbjct 857239 GAGCTCACGAGCCTCGGGGGACTCGAAGGGCATGCGCAGAGCAAGGAAAGCATCGGCAAG 857298 Query 213311 CCCCTGGACCCCGATGCCGATGGGTCTGTGTCTCAGGTTAGACTTG-GAGCACTCCTCCA 213369 ||||| || || | || ||||||| ||| | || |||| ||| |||| ||||| | Sbjct 857299 ACCCTGAACACCAAGACCAATGGGTCGGTGGCGCATGTTACTGTTGCGAGC-CTCCTGGA 857357 Query 213370 AGGGGTAAAAGTTGCAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACAT 213429 ||||| ||| |||||||||||||| |||||||| | | || | |||| | Sbjct 857358 CAGGGTAGTGGTTCACATCGATGATCTTGTTCAGGTTGCGAATAACAACCTGACTGACCT 857417 Query 213430 GGGCCAGGTACTCGTGATTGAACACGTAGC------CCCCGTCCTGCACAAACTCAGGCA 213483 | ||| | | ||||| |||||| | ||| | | || |||| Sbjct 857418 TGTGCAGCTTC------TTGAAGTCGTAGCAAGCCTCATCGTAGTTGATGAAGGAGGGCA 857471 Query 213484 GGGCGATGCTGGCCAGGTTGCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCT 213543 | | | ||| |||||||| ||||| ||||| | || | | |||||| || || | Sbjct 857472 GAGATAGAGAGGCAAGGTTGCAGACGGCGACCTCGTCAGGGGCACAGTACTCGATAATTT 857531 Query 213544 CGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACT-TTGCGTTG 213602 | ||||| || ||| || ||||||||| || ||||||| ||||| ||| ||||| | Sbjct 857532 CAGTGCAAAGATTGGAGCTTCGGATGGTACCGAGGTTCTTTTGGTT--ACTCTTGCGGTT 857589 Query 213603 GCA-GAATCCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTG 213661 ||| | ||| |||||||||||| | ||| |||||||| ||||| | | || || Sbjct 857590 GCAGGCATCTTTGTAGAGCATGAATGGGTTTCCGGTCTCAGTCTGGGCCTCAAGAATGGC 857649 Query 213662 GCTCCAGAGGTACCTGGCCTTGACCACCCGCCTGACAGCTCCGGGCGTAGCCTCGTACTG 213721 | ||| || | | ||||||| | | | ||| | | || | |||||||| Sbjct 857650 GTACCAAAGCTTCTGAGCCTTGATCGTCTTGC-GACCCTTGCCCGCCT--TCTCGTACTT 857706 Query 213722 TTCGTAGAGCTCGTTGAATTCGTGGCCCCAGACCCTGTCCAGTCCCGGACAGGATGCGGG 213781 |||||| || | | ||| || | || || | | || || || || ||| Sbjct 857707 TTCGTACAGAGCCTCGAACTCCTCTCCGTAGCAGTCGGCGAGGCCAGGGCACTCGTTGGG 857766 Query 213782 ACACATGAGGCTCCAGTCCCCGTCATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCA 213841 ||||| || ||||||| |||| | | || | || ||| || || || |||| ||| Sbjct 857767 GCACATAAGTGTCCAGTCACCGTTCTTTTCAACACGCTTCATAAAAAGATCAGGGATCCA 857826 Query 213842 CAGCGCGGTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATC 213901 || || ||| ||||| | || | ||| ||| || ||| || || ||||| Sbjct 857827 AAGGGCAAGGAAAAGGTCACGGGCACGGACCTCCTCCTTACCGTGGTTCTTACGGAGATC 857886 Query 213902 TAGAAAGTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCG---G 213958 || || || |||| || | |||||| ||||| | |||||||||||| || || | | Sbjct 857887 AAGGAACTCGAAGACATCAGAGTGCCAAGGCTCGAGGTAGATGGCAAAAGCACCGGGTCG 857946 Query 213959 CCTCTTGCCGCCCTGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTAC 214018 | | ||||| |||||||| || || || ||||||||| || || | || || Sbjct 857947 CTTGTTGCCACCCTGGTCGACATACCGAGCAGTGTTGTTGAAGACACGAAGCATAGGAAC 858006 Query 214019 CAGCCCGTTGGACTGT-CCGTTGGTTCCCGCTATATACGAGCCGGAGGCCC--TCAGGTT 214075 | ||||| || ||| |||||||| || || || || ||||| | || | | | | Sbjct 858007 GACACCGTTCGA-TGTACCGTTGGTACCGGCGATGTATGAGCCAGTAGCACGGATACGGT 858065 Query 214076 GCTCATGGAGAGCCCTATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGT 214135 || ||| ||| || || ||||| || ||||||||||||||| ||| | | | ||| Sbjct 858066 GCACATTCAGA--CCAATACCACCAGCCATCTTGGAGATCATGGCACAGGTCTTGAGAGT 858123 Query 214136 CTCCATGATGCCGGCCATGCTGTCATCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTG 214195 || ||| || | || ||||| || | | | | ||||||||| || | || Sbjct 858124 ATCGTAGATTCCCTCAATACTGTCGTCCTTCATATCAACCAAGAAGCAAGATGACAATTG 858183 Query 214196 GGGCCTGGACGAGCCAGAGTTGAAAAGCGTGGGGCTGGCATGGATCATAAACTTGTTAGA 214255 |||| | | ||| | ||||| ||||||||| ||||| | | |||||| | || Sbjct 858184 GGGCTGAGGGGTGCCGGCATTGAAGAGCGTGGGGGAAGCATGCGTGAAGAACTTGCTTGA 858243 Query 214256 GAGGAGCCTGTAGGTCTCCAGGACTGAGGGGATGTCGTGCTTGTGGATCTGTAGAG-CGC 214314 | || |||| ||||||| |||| ||| || | ||| | || | | Sbjct 858244 CATCAGGTTGTATGTCTCCAAGACTCGCTCGATATCATCACCCCAGATACCAACAGACAC 858303 Query 214315 ACCTCATCAGCATGTGCTGGGGCCTCTCTATGGGTCCTTTGGGGC--CCTTGAGCAGGTA 214372 | | ||| | ||||||||| || | ||| | ||| | | |||||| ||||| Sbjct 858304 A-CGCATGATCATGTGCTGTGGGCGCTCGA--CAATCTTACCGTCAATCTTGAGGAGGTA 858360 Query 214373 GGAGCGCTCCAGAGTCTTGAACCCAAAGTA 214402 || ||||||| ||||||||| |||||||| Sbjct 858361 TGATCGCTCCAAAGTCTTGAAGCCAAAGTA 858390 >seq179 Length=1646338 Score = 192 bits (212), Expect = 1e-43 Identities = 488/733 (67%), Gaps = 21/733 (3%) Strand=Plus/Plus Query 47840 TGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTCC 47899 |||||||| | || | ||||| |||||||| ||||| || | | |||||||| ||| Sbjct 1575533 TGGTAGTCGGCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCAAGGGAGATGTTTTCC 1575592 Query 47900 ATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAGGCCCATCTGTTCCA-GCAG 47958 |||||| ||||||||||| | || || ||| | || ||| | || | || Sbjct 1575593 ATGAAGTCGAAGGGGTTGGTGGCCTTGTAGACCT-TCTCGTTGCCAAGAGCGACAAGGAG 1575651 Query 47959 GTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGGA 48018 |||| |||||| |||| ||||| | ||||||| ||||||||| | |||| Sbjct 1575652 ACGATCAGCGACGAACTCAATGTACTGCTTCATGAGGTCAGAGTTCATGCCGAGAAGGG- 1575710 Query 48019 CACGGGCAA-AGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCT 48077 ||| || || ||||| ||||| ||||||| || || ||||| || | || | Sbjct 1575711 CACAGGGAAGAGCCTCAGTGAGGAACTCCTGTTCAATGGTGACGGCATCAGTGATGATAT 1575770 Query 48078 GCTTAACGCGGGACTCTGAGGGTTTGTTGCGCA-GGTGCTTG------GCATAGAGCATG 48130 ||| | | |||| ||| || ||| || ||| | | ||| | | Sbjct 1575771 -CTTGAATCA----TCTGC----TTGCTG-GCACGGCCCTTTAGGTGAGAGTGGAGGAGG 1575820 Query 48131 CAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGA 48190 ||||||||||| |||| | || ||||| || ||||||| |||| |||||| ||| Sbjct 1575821 CAGGCAAAGTCAGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTAGAGAAGGTCAGA 1575880 Query 48191 CCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAG 48250 |||||||||| || | || |||||||||||||| | ||||| | ||| ||||||| Sbjct 1575881 CCAGGCATGAGACCACGCTTCTTGAGCCAGAAAATGGAGGCGAAGGCACCACTGAAGAAG 1575940 Query 48251 ATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAG 48310 || ||||| || || ||||| || ||| | | | || |||| || ||| ||| | Sbjct 1575941 ATACCCTCAACGGCAGCGAAAGCAACGAGGCGTTGGGCAAAGGAAGAGTCCTTATCTTGG 1576000 Query 48311 ATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGG 48370 ||||| | |||||||| |||||||| |||||| || || ||||| ||||| | Sbjct 1576001 ATCCATCGGATGGCCCAGTCAGCCTTCTTTCGGATGCAGGGAATGGTCTCAATGGCGTTG 1576060 Query 48371 AAGAGCTTCTTGCACTCACCTGCGTCCGCAACATAGGTAGTGAGCAGCTTTGCGTACATC 48430 || || | | | || | | ||| | |||||| || || | ||| || Sbjct 1576061 AAAAGGTAGGTTCGCTGGGCGGGCTCCTTGATATAGGTGTCGATGAGGAGGGAGTAGGTC 1576120 Query 48431 TCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACC 48490 || ||||| | ||||| || ||||||||| |||||||| | ||||| | | Sbjct 1576121 TCGGAGTGAATGTTCTCCATCATGATCTGGAAGCCGTAGAAACAACGAGCCTCGGGGATC 1576180 Query 48491 TGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAGCA 48550 || || || ||||| ||| | || ||||| ||||| || ||||| || ||||| Sbjct 1576181 TGGACCTCGCCACTGAATCGCTCGACGAGGTTCTCGTTGACAATACCATCAGAGGCAGCG 1576240 Query 48551 AAGAAGGCAAGGA 48563 ||||| ||||||| Sbjct 1576241 AAGAAAGCAAGGA 1576253 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931530622542080