Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20fujikuroi_20[genbank_20GCA_5F001023035.1_202015-06-09] 187 sequences; 43,110,459 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq27 125 8e-24 >seq27 Length=3261259 Score = 125 bits (138), Expect = 8e-24 Identities = 274/407 (67%), Gaps = 9/407 (2%) Strand=Plus/Minus Query 138183 ACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGT 138242 ||| | ||||| || || |||||||| || || || || ||||||||||| ||||| || Sbjct 2678310 ACAGCGATAGGGCCAACACCAGGACCGCCGCCGCCGTGGGGAATACAGAAGGTCTTGTGG 2678251 Query 138243 AAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACCTACCTGTGCA 138302 | || ||||| || ||||| |||||| ||||| || | ||||| | ||| || Sbjct 2678250 AGGTTGAGATGGCAGACATCAGCACCAATGTCACCGGGGCTGCAGAGACCAATCTGAGCG 2678191 Query 138303 TTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACGATCTTACATATC 138362 || | || ||||| || | || || |||| |||| || || || | | ||| | Sbjct 2678190 TTCATGTTGGCACCGTCCATGTAGACAAGACCGCCATGCTCGTGGACAAGATCACAGACT 2678131 Query 138363 TGTCTGATGTTTGTTTCAAATACACCATGAGTCGATGGATATGTAATCATAATACATGAG 138422 || |||| | | || || ||||| ||| || ||||| |||| ||| ||| | Sbjct 2678130 TGCTTGATCTCAGGCTCGAAGACACCGAAAGTAGAGGGATAAGTAACCATGATAGCAGCA 2678071 Query 138423 AGTTCAAATGTATTCATGATTGCTTTCTT---CTCTAGATCTTTGATGTCTATGTTGCCA 138479 || ||| | | | || || ||| || ||||| | ||| || | ||| ||| Sbjct 2678070 AGCTCATCAGCGTGCTTG---GCACACTTGGCCTTGAGATCCTCGATATCCAGGTTACCA 2678014 Query 138480 -TCAT--CATCACACTTGACACCTACAACTTTCATTCCTGCCATGACTGCACTAGCAGGA 138536 || | | |||||||||||| ||||| ||||| || |||||| | ||| |||||| Sbjct 2678013 GTCTTGCCGTCACACTTGACAGTAACAACCTTCATGCCAGCCATGGCAGCAGAAGCAGGG 2677954 Query 138537 TTAGTTCCATGTGCTGACTCTGGTATCAGACATACATTTCTTTTATC 138583 || || || || || || |||| || || || || |||| ||||| Sbjct 2677953 TTGGTACCGTGAGCAGAAACTGGGATAAGGCAGACCTTTCGCTTATC 2677907 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578997046591240