Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20fujikuroi_20[genbank_20GCA_5F001023035.1_202015-06-09] 187 sequences; 43,110,459 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq162 196 6e-45 seq179 104 3e-17 seq187 87.8 2e-12 >seq162 Length=1634208 Score = 196 bits (216), Expect = 6e-45 Identities = 1134/1783 (64%), Gaps = 55/1783 (3%) Strand=Plus/Minus Query 75211 CCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGT 75270 ||||||| ||||| ||||||| || | | || ||| || || || || || || Sbjct 858325 CCCACAGCACATGATCATGCGTGTGTCTGTTGGTATCTGGGGTGATGATATCGAGCGAGT 858266 Query 75271 CTTGGAGACATACGACAAGATGTCCCAAGGTATGTTCATTCACGCAA----CACCAACCC 75326 ||||||||||||| || |||||| | | | |||| |||||||| | || || | Sbjct 858265 CTTGGAGACATACAACCTGATGTC---AAGCAAGTTC-TTCACGCATGCTTCCCCCACGC 858210 Query 75327 TCTTCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGG 75386 |||||||||| || || || || || |||| ||||||| | | | | |||| Sbjct 858209 TCTTCAATGCCGGCACCCCTCAGCCCCAATTGTCATCTTGCTTCTTGGTTGATATGAAGG 858150 Query 75387 AGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGG 75446 | ||| || | || ||||| | ||||| | | ||||| ||||| ||| || Sbjct 858149 ACGACAGTATTGAGGGAATCTACGATACTCTCAAGACCTGTGCCATGATCTCCAAGATGG 858090 Query 75447 CTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTAT-TCGGGGG 75505 |||| |||||||| || | | || | | | || | | ||| || ||| || Sbjct 858089 CTGGTGGTATTGGTCTGAATGTGCACCGTATCCGTGCTACTGG--CTCATACATCGCCGG 858032 Query 75506 -ACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCG 75564 || || ||| ||| | ||| | |||| |||||||| || || ||| ||| || || Sbjct 858031 TACCAACGGTACATCGAACGGTGTCGTTCCTATGCTTCGTGTCTTCAACAACACTGCTCG 857972 Query 75565 CTATGTAAATCAAGCGGGGCGTC--GCAAGG-GGTCCATC-GCGGTCTACTTGGAACCAT 75620 ||||| | || | | ||| | || | ||| | | || ||||| | || || | Sbjct 857971 GTATGTCGACCAGG-GTGGCAACAAGCGACCCGGTGCTTTTGCCATCTACCTCGAGCCTT 857913 Query 75621 GGCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTC 75680 |||| | ||| || | ||||||||||| | || ||||| ||| | || |||| || Sbjct 857912 GGCACTCTGATGTCTTCGAGTTCCTTGATCTCCGTAAGAACCACGGTAAGGAGGAGG-TC 857854 Query 75681 GGTGTA-GAGATCTCTTTTCAT-CCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGA 75738 ||| | || || ||| | | |||| ||||| || || ||||| |||||||| ||||| Sbjct 857853 CGTGCCCGTGACCT-TTTCCTTGCCCTTTGGATCCCTGATCTTTTTATGAAGCGTGTTGA 857795 Query 75739 GGAGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGT 75798 || ||| | ||| | ||| | || || || || || || ||| ||||| Sbjct 857794 AAAGAACGGTGACTGGACACTTATGTGCCCCAACGAGTGCCCTGGCCTCGCCGACTGCTA 857735 Query 75799 GGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGC---CAATGC 75855 || |||||||| || || || ||| |||||| || ||| ||| | | ||| | Sbjct 857734 CGGAGAGGAGTTCGAGGCTCTGTACGAAAAGTACGAGAAGGCGGGCAAGGGTCGCAAGAC 857675 Query 75856 GACTGTACCAGCCGCCGATG-TTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAA 75914 || | || | | || | ||||| | || ||||| | | ||||| ||||| |||| Sbjct 857674 GAT----CAAGGCTCAGAAGCTTTGGTACGCCATTCTTGAGGCCCAGACTGAGACCGGAA 857619 Query 75915 CACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAA 75974 |||| ||||| ||||| ||||| || ||| ||||||||||||||||| | || | Sbjct 857618 ACCCATTCATGCTCTACAAAGATGCCTGCAACCGCAAGAGTAACCAAAAGAACCTCGGTA 857559 Query 75975 CAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGG 76034 | ||| ||||| ||||||||||| |||||| | |||||| | || ||| | Sbjct 857558 CCATCCGAAGCTCCAATCTTTGCACTGAAATTATCGAGTACTGTGCCCCTGACGAGGTCG 857499 Query 76035 CTGTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCA---ATGAAGAGACTCGCA 76091 | || ||||| | || || | | || || | ||| | || ||| || || Sbjct 857498 CCGTCTGCAACCTTGCCTCTCTATCTCTGCCCTCCTTCATCAACTACGATGAGGCTTGC- 857440 Query 76092 CTTTTGATTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAG 76151 | || | | || || || | ||| || |||||| || || ||| Sbjct 857439 --TACGACTTCAAGAAGCTGCACAAGGTCAGTCAGGTTGTTATTCGCAACCTGAACAAGA 857382 Query 76152 TCATTGACAGAAATTTTTATCCCGTTGAGACTGCGCGAAAGTCTAATATGCGACACAGAC 76211 |||| || || || || || || || || || ||| ||||| ||| ||| Sbjct 857381 TCATCGATGTGAACCACTACCCTGTCCAGGAGGCTCGCAACAGTAACATGCGCCACCGAC 857322 Query 76212 CTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATT-TTGTGCCGCTACGCATTT 76270 | |||||| | |||||||| ||||| || |||| || || | || ||| | || Sbjct 857321 CCATTGGTCTTGGTGTTCAGGGTCTTGCCGATGCTTTCCTTGCTCTG-CGCATGCCCTTC 857263 Query 76271 GATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCC 76330 || || || || ||| | ||| | || ||||| ||||| |||||||| | Sbjct 857262 GAGTCCCCCGAGGCTCGTGAGCTCAATAAGCAGATTTTTGAGACCATTTATCACGCTGCG 857203 Query 76331 CTGGAGGCGAGTTGTG-AATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTC 76389 ||| || ||| | ||||| | | | ||| |||| || || ||||||| Sbjct 857202 CTGACTGC-CTCCGTGCAGCTGGCTAAGGAAGAGGGTCCCTACTCCACCTTCAAGGGTTC 857144 Query 76390 TCCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAAGCT--CAAC 76447 ||||| || | || | || ||||| || |||| |||| || || || || | | Sbjct 857143 CCCCGCCTCTGAGGGTATTCTCCAGTTCGACATGT-GGAACGTCAAGCC-CTCTGACCTC 857086 Query 76448 TACGACTGGGA---TGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTT 76504 | |||||||| | ||| ||||| ||||| | || | || |||||||| Sbjct 857085 TGGGACTGGGAGACTCTTCGAGAGGAA---GTCAAGACACACGGCATCCGCAACAGTCTA 857029 Query 76505 TTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTT 76564 | | || || ||||| || ||| ||| | || || |||| || || || ||||| Sbjct 857028 CTCCTTGCTCCTATGCCTACTGCCAGTACCTCCCAGATTCTGGGCAACAACGAGTGCTTC 856969 Query 76565 GAACCATACACAACAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCATTGTC 76624 || || ||||| | || ||||||| | | ||||| |||||||| ||||| Sbjct 856968 GAGCCCTACACCTCCAATATCTACCAACGCCGTGTTCTCGCTGGTGAGTTCCAGGTTGTC 856909 Query 76625 AACAAGCACCTCGTCAATGACCTCAAGAAGATTGGTCTCTGGTCCAAGGATATGAAGGAT 76684 ||| || |||| ||||| | || ||||| |||||| | | ||||||| | Sbjct 856908 AACCCCTGGCTGCTCAAGGACCTTGTCGACATGGGTCTGTGGTCCGATGCTATGAAGAAC 856849 Query 76685 CTCATGGTGAAAGCGGGTGGTTCCATTCAAAATATCTCAGATATCCCAGATGATATCAAG 76744 | ||| | | | ||| |||||||| || || | | ||||| | ||| ||||| Sbjct 856848 CGCATCATTGCTGAGAATGGATCCATTCAGAACATTCCCAACATCCCTGCCGATGTCAAG 856789 Query 76745 AATCTCTACCGCACAGTGTGGGAAATCAAGATGAAAGATGTCATTGACATGGCCGCAGAT 76804 ||| || || || ||||| ||| | | ||| | | ||||| || ||| Sbjct 856788 GCTCTGTATAAGACTGTTTGGGAGATCTCTCAGCGCCAGGTCGTCCAGATGGCTGCTGAT 856729 Query 76805 CGTGGTCGCTTCATTGATCAAAGTCAAAGT--ATGAATCTATTCATGGAAAGTCCAACGA 76862 || ||| ||||||||||| |||| ||| |||| | |||| | || |||| Sbjct 856728 CGAGGTGCCTTCATTGATC--AGTCCCAGTCACTGAACATCCACATGAAGGACCCCACGA 856671 Query 76863 TGTCCAAGCTCTCTTCTATGCA-TATGTACGCGTGGAAACAGGGGCTCAAAACCGGAATG 76921 || |||| || | ||||| | || | || ||||| | || ||||| || || ||| Sbjct 856670 TGGGCAAGATCACCAGCATGCACTTTGCAGGC-TGGAAGCTTGGCCTCAAGACTGGCATG 856612 Query 76922 TACTATCTCCGATCAAAGGCGAAAGCCCGACCAATTCAGTTCA 76964 ||||| || || || |||| || || |||||||||| Sbjct 856611 TACTACCTTCGTACACAGGCTGCTGCTGCTCCTATTCAGTTCA 856569 >seq179 Length=1646338 Score = 104 bits (114), Expect = 3e-17 Identities = 299/457 (65%), Gaps = 16/457 (4%) Strand=Plus/Minus Query 65068 TCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCA 65127 ||||| ||| | ||||| |||| || || || ||||||||||||||| || | Sbjct 1575984 TCCTTTGCCCAACGCCTCGTTGCTTTCGCTGCCGTTGAGGGTATCTTCTTCAGTGGTGCC 1575925 Query 65128 TTCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAAT 65187 ||| | | |||| ||| | |||||||| ||||||||||| || || |||||| || Sbjct 1575924 TTCGCCTCCATTTTCTGGCTCAAGAAGCGTGGTCTCATGCCTGGTCTGACCTTCTCTAAC 1575865 Query 65188 GAACTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGCCGTGGAGCTCTTCAAGACT 65247 || || || || || || |||||||| ||| || |||||| || ||| || | || Sbjct 1575864 GAGCTCATCTCTCGTGACGAGGGTCTTCACACTGACTTTGCC-TG--CCTCCTCCACTCT 1575808 Query 65248 TTGCGTAATAGAC---CCACTACCGAAACTATCCACGCCATCGTGAAAGAGGCGGTTGAG 65304 | || | | ||| | | | || || | ||| | | || || || Sbjct 1575807 CACCTAAAGGGCCGTGCCAGCAAGCAGATGATTCAAGATATCATCACTGATGCCGTCACC 1575748 Query 65305 ATTGAGAAAGGGTTCATCTTGGACGCACTCCCATGTAATCTCATCGGTATGAACTCTGAG 65364 ||||| | | |||| || || || || || ||| || |||| ||||||||||| Sbjct 1575747 ATTGAACAGGAGTTCCTCACTGAGGCTCTTCCCTGTGCCCTTCTCGGCATGAACTCTGAC 1575688 Query 65365 AAGATGTCCGAGTACATTGAGTATGTGTCGGATCGTCTCCTCAAACAAGTTGGGGTGCCA 65424 ||| |||||||||||| || | ||||||||||| |||| || Sbjct 1575687 CTCATGAAGCAGTACATTGAGTTCGTCGCTGATCGTCTCCTTGTCGCTCTTGG-----CA 1575633 Query 65425 CCCA-----TTTGGAACGCGAAGAATCCATTTGACTTTATGGAAAACATTAGCCTTGATG 65479 | | | | || || | || || || ||||| ||||||||||| ||||| | Sbjct 1575632 ACGAGAAGGTCTACAAGGCCACCAACCCCTTCGACTTCATGGAAAACATCTCCCTTGGCG 1575573 Query 65480 GGAAGACCAACTTCTTTGAGAAGCGAGTTGGGGACTA 65516 | |||||||||||||| |||||||| |||| ||||| Sbjct 1575572 GCAAGACCAACTTCTTCGAGAAGCGTGTTGCCGACTA 1575536 >seq187 Length=976330 Score = 87.8 bits (96), Expect = 2e-12 Identities = 123/173 (71%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 27858 GCGCTCAAGGACAAGTTGTGCGATGCGATCCCCTTTCTTTACCTCAAAGTCTTTGTCTCC 27917 |||||| || |||||||| || ||||| || || | ||| ||||||||||| || Sbjct 386876 GCGCTCCAGAACAAGTTGAGCAATGCGGTCGCCCTCCTTCACCTCAAAGTCGGATTCGTT 386935 Query 27918 GTGATTGAAGAGAACGACTTTGACTTCACCTGTATAGTCGGGATCAATAACACCCGCACC 27977 || |||||||| | ||| ||||| | ||| || |||| ||| || ||||| || || Sbjct 386936 ATGGTTGAAGAGCAGGACCTTGACCTGACCGCGGTAATCGGCATCGATGACACCAGCGCC 386995 Query 27978 AACTTGAATACCATGCTTCACAGCGAGACCGGATCGTGGTGCAACACGACCAT 28030 | ||| |||||| ||||||||| ||||| || |||| || |||| Sbjct 386996 TGTGTCAATGAAATGCTTGGAAGCGAGACCCGATCGAGGGGCAATGCGTCCAT 387048 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596568205518560