Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20fujikuroi_20[genbank_20GCA_5F001023035.1_202015-06-09] 187 sequences; 43,110,459 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq27 105 5e-18 >seq27 Length=3261259 Score = 105 bits (116), Expect = 5e-18 Identities = 153/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| |||||||| || || || ||||| || || ||||| || || | || || || Sbjct 1153463 ACGGAGCACCAAGTGGAGAGTAGATTCCTTCTGGATGTTGTAGTCGGAAAGAGTTCGGCC 1153522 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || ||||| ||||||||| | || | || || |||||||| ||||||||||| || Sbjct 1153523 ATCCTCAAGTTGCTTGCCAGCAAAGATGAGTCGCTGTTGATCCGGAGGAATACCCTCCTT 1153582 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 ||| || | || || ||| | || | || || || || ||||| ||||| || Sbjct 1153583 GTCCTGGATCTTGCTCTTCACATTATCAATGGTATCGGATGACTCGACTTCCAGAGTAAT 1153642 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || ||||| | ||| || || || || ||||| Sbjct 1153643 GGTCTTTCCAGTAAGGGTCTTGACGAAGATTTGCAT 1153678 Score = 95.1 bits (104), Expect = 9e-15 Identities = 150/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631 || || || | |||||| ||||| || || |||||||||||||| | | ||||| Sbjct 1153974 CGGAGAACAAGATGAAGAGTGGACTCCTTCTGAATGTTATAATCAGAGAGAGTGCGGCCG 1154033 Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691 || || || || ||||| || | ||||| | |||||| || || || |||||||| ||| Sbjct 1154034 TCCTCAAGCTGCTTGCCGGCGAAAATCAAGCGTTGCTGGTCGGGGGGGATACCCTCCTTG 1154093 Query 29692 TCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATA 29751 || || | || || ||| | || | || || ||| || || || || || || Sbjct 1154094 TCCTGGATCTTCGACTTAACATTGTCGATGGTATCGGAAGACTCAACCTCGAGGGTGATG 1154153 Query 29752 GTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || ||||| || | ||| || || || |||||||| Sbjct 1154154 GTCTTGCCGGTCAGGGTCTTGACGAAGATCTGCAT 1154188 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385218322061367