Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20fujikuroi_20[genbank_20GCA_5F001023035.1_202015-06-09]
187 sequences; 43,110,459 total letters
Query= NC_023639.1
Length=1168989
Score E
Sequences producing significant alignments: (Bits) Value
seq85 178 1e-38
>seq85
Length=1202620
Score = 178 bits (196), Expect = 1e-38
Identities = 707/1102 (64%), Gaps = 17/1102 (2%)
Strand=Plus/Minus
Query 281380 ATTAGTAATAGTAATATTCTTGGATTTGTTTGTTGATTTATCAGCGGCAGTCACATTAAG 281439
||| ||||| ||| || ||||| ||| || || || |||| | || || |
Sbjct 1183019 ATTGGTAATGACAATCTTGTTGGACTTGCCAGTGCCCTTCTCGACGGCGGAGACGTTCAT 1182960
Query 281440 AATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGG 281499
||||| |||||||| | ||| || ||||| |||||||| || || || | | |||||
Sbjct 1182959 GATACCGTTGGCATCAAGATCGAAGGTGACCTCAATTTGGGGAACACCACGGGGGGCAGG 1182900
Query 281500 TGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTC 281559
||||| || | | || | |||| || || || || ||| || || ||
Sbjct 1182899 AGGGATACCAGTGAGCTCGAACTTGCCCATGAGGTTGTTGTCCTTGGTGCGTTGACGCTC 1182840
Query 281560 ACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTCT 281619
||||||| | | |||||| ||| ||| || || ||||| | || | || ||
Sbjct 1182839 ACCCTCGTAGACCTGGATAAGAACACCAGGCTGGTTGTCTGAGAAGGTGGAGAAGACCTC 1182780
Query 281620 GGATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCAGC 281679
||| || || ||| || || ||||| | |||| |||||||| |||||||||||
Sbjct 1182779 GGACTTCTTGGTAGGGATGGTGGTGTTGCGGGGGATAAGCTTGGTCATCATACCACCAGC 1182720
Query 281680 TGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATAT--TTTGAAGTTTT 281737
|| || | ||| ||||| ||||| | |||||| | || | || | || | | ||
Sbjct 1182719 GGTCTCGATACCGAGAGAGAGAGGGGCGACATCGAGAAGCAGGATCTCGTTGGTGGCCTT 1182660
Query 281738 TCATCA-GTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTC 281796
| | || | ||| ||||| || || || | |||||||| || |||||||| ||
Sbjct 1182659 GCTGGAGGTGTCACCTGAGAGAATCGCGGCCTGGACGGCAGCACCGTAGGCAACAGCCTC 1182600
Query 281797 ATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAGTTGTCT 281856
||| || || | | | || | | || || ||||| ||| | | || | |||
Sbjct 1182599 ATCGGGGTTGATGGACTTGTTGGGCTCCTTTCCGTTGAAGTAATCGGTGATGAGCT-TCT 1182541
Query 281857 -TACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGATTTAT 281915
|| || ||||||| ||||| || || | ||||| || || || | || || |
Sbjct 1182540 GGACACGGGGGATACGAGTAGATCCACCGACGAGGACAATCTCGTGGACGAGGGACTTGT 1182481
Query 281916 CCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCAGCTCTAAACAAGTCTG 281975
| | || | || | || || ||||| | | | | || || | ||
Sbjct 1182480 CGATCTTGGCGTCGGTAAGGACACGGTCGACGGGCTGGATAGTGGATCGGAAAAGATCCT 1182421
Query 281976 AACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACAT-TATAA-TCAATTCCTTCGAA 282033
|| || || ||||| ||| | || || || | || || ||||| || |||||
Sbjct 1182420 GGCAGAGCTCCTCGAAACGAGCACGGGT--GATGGAGGTGTAGAAGTCAATACCCTCGAA 1182363
Query 282034 CAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTC 282093
| ||| |||| || |||| || |||| || ||||| |||| || || ||||| ||
Sbjct 1182362 GAGAGAGTCAATCTCGATCGAGGTCTGAGCAGAGGAAGAAAGTGTTCGCTTGGCACGCTC 1182303
Query 282094 ACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGA--TTGAT--TCAAATCTGTTTTAT 282149
|| || || | || | ||| | ||| || || ||| | ||||||| | || |
Sbjct 1182302 GCAAGCAGTTCGGAGACGTCGCAGGGC----GCGGACGTTGGTGCTCAAATCCTTCTTGT 1182247
Query 282150 ATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAATCTTCACCTC 282209
||||||||||| || | || | | || ||||| || || || || ||||| |
Sbjct 1182246 GCTTTCTCTTGAATTCATTTACGAAGTGGTTGACCAGACGGTTGTCGAAGTCCTCACCAC 1182187
Query 282210 CCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAA 282269
|||| | ||| | || | |||| | || | ||| | || || |||| | | |
Sbjct 1182186 CCAAGTGAGTGTCACCGGCAGTAGACTTGACCTCGAAGATACCCTCCTCAATGGTAAGGA 1182127
Query 282270 GAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTT 282329
||| ||||| ||| |||||||| | ||| || || || || || || ||
Sbjct 1182126 GAGACACATCGAAGGTACCACCACCAAGATCGAAGATCAGGACGTTGCGCTCGCCCTCAA 1182067
Query 282330 GGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAA 282389
|| || |||||||| || |||| || |||||||| || || || ||||||| | ||
Sbjct 1182066 CCTTCTTGTCAAGACCGTAGGCAATGGCGGCAGCAGTAGGCTCGTTGATAATTCGGAGAA 1182007
Query 282390 CATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAAT 282449
| || ||||| || || || ||||| || |||||||| | || |||||||| || |
Sbjct 1182006 CGTTGAGACCGGCGATGAGACCAGCATCCTTGGTGGCTTGACGCTGAGAATCGTTGAAGT 1181947
Query 282450 ATGCAGGAACAGTAATAACGGC 282471
| ||||| ||||||| ||||||
Sbjct 1181946 AGGCAGGGACAGTAACAACGGC 1181925
Score = 95.1 bits (104), Expect = 9e-14
Identities = 94/122 (77%), Gaps = 0/122 (0%)
Strand=Plus/Plus
Query 432288 GGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAGCGTGTCGATATGTCTGCACGT 432347
||||| || |||||| || | || || |||||||| ||||||||||| | || ||||||
Sbjct 1044428 GGTAAGGAGGGTCGTCTTCGTGGTAACTTGATGGGCAAGCGTGTCGACTTTTCGGCACGT 1044487
Query 432348 ACAGTTATTACTTCTGATCCTAATATTGCTCTCAATGAAGTTGGTGTTCCTCTCATTATT 432407
|| || |||||| |||| | || || |||| | || |||||||| |||| || ||||
Sbjct 1044488 ACTGTCATTACTGGTGATGCCAACCTTTCTCTACACGAGGTTGGTGTCCCTCGCAGTATT 1044547
Query 432408 GC 432409
||
Sbjct 1044548 GC 1044549
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3740621219090262
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |