Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20fujikuroi_20[genbank_20GCA_5F001023035.1_202015-06-09] 187 sequences; 43,110,459 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq27 105 6e-18 seq145 86.0 6e-12 >seq27 Length=3261259 Score = 105 bits (116), Expect = 6e-18 Identities = 141/196 (72%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 131928 TTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGG 131987 ||||||| || || |||||||||||||||| ||| || |||||| | ||| ||||| | Sbjct 1153255 TTGACTCCTTCTGGATGTTGTAGTCGCTCAAGGTGCGACCATCTTCCAACTGCTTACCAG 1153314 Query 131988 AATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCA 132047 |||| |||||||| ||||| || || || || || ||||| ||| || |||| Sbjct 1153315 CGAAGATAAGACGCTGCTGATCAGGGGGGATACCCTCCTTATCCTGAATCTTGCTCTTCA 1153374 Query 132048 ACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 132107 | || | ||| || | | ||| || || | || | || || ||||||||||| | Sbjct 1153375 CGTTGTCGATAGTGTCACTAGACTCAACCTCAAGAGTGATGGTCTTTCCAGTCAGAGTCT 1153434 Query 132108 TTATGAAAATCTGCAT 132123 | | |||||||||||| Sbjct 1153435 TCACGAAAATCTGCAT 1153450 >seq145 Length=1022755 Score = 86.0 bits (94), Expect = 6e-12 Identities = 152/222 (68%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 131902 ACGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGT 131961 ||| | ||| | |||| || | | | ||||| || || |||||||||||||||| ||| Sbjct 404499 ACGGAGGCGGAGGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGT 404440 Query 131962 ACGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCC 132021 || ||| |||||||| || || | | |||| || ||||| || || || || ||||| Sbjct 404439 GCGGCCATCCTCGAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCAGGGGGGATGCC 404380 Query 132022 TTCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGAC 132081 || || || || || || | | || | || |||| | |||||| || | Sbjct 404379 CTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCAAG 404320 Query 132082 CGTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || | ||| || || || || || || | |||||||||||| Sbjct 404319 GGTGATCGTCTTCCCCGTGAGGGTCTTGACGAAAATCTGCAT 404278 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476610085921320