Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20fujikuroi_20[genbank_20GCA_5F001023035.1_202015-06-09] 187 sequences; 43,110,459 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq162 242 4e-59 seq179 141 1e-28 >seq162 Length=1634208 Score = 242 bits (268), Expect = 4e-59 Identities = 1141/1786 (64%), Gaps = 47/1786 (3%) Strand=Plus/Minus Query 104221 CCCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGT 104280 ||||||| ||||| ||||||| ||| | | ||||| || || || || || || Sbjct 858325 CCCACAGCACATGATCATGCGTGTGTCTGTTGGTATCTGGGGTGATGATATCGAGCGAGT 858266 Query 104281 CTTGGAGACATACGACAAGATGTCCCAAGGTATGTTCATTCACGCAA----CACCAACCC 104336 ||||||||||||| || |||||| | | | |||| |||||||| | || || | Sbjct 858265 CTTGGAGACATACAACCTGATGTC---AAGCAAGTTC-TTCACGCATGCTTCCCCCACGC 858210 Query 104337 TCTTCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGG 104396 |||||||||| || || || |||||| |||| ||||||| | | | | |||| Sbjct 858209 TCTTCAATGCCGGCACCCCTCAGCCCCAATTGTCATCTTGCTTCTTGGTTGATATGAAGG 858150 Query 104397 AGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGG 104456 | ||| || | || ||||| | ||||| | | ||||| ||||| ||| || Sbjct 858149 ACGACAGTATTGAGGGAATCTACGATACTCTCAAGACCTGTGCCATGATCTCCAAGATGG 858090 Query 104457 CTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTAT-TCGGGGG 104515 |||| |||||||| || | | || | | | || | | ||| || ||| || Sbjct 858089 CTGGTGGTATTGGTCTGAATGTGCACCGTATCCGTGCTACTGG--CTCATACATCGCCGG 858032 Query 104516 -ACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCG 104574 || || ||| ||| | ||| | |||| |||||||| || || ||| ||| || || Sbjct 858031 TACCAACGGTACATCGAACGGTGTCGTTCCTATGCTTCGTGTCTTCAACAACACTGCTCG 857972 Query 104575 CTATGTAAATCAAGCTGGGCGT---CGAAAGGGATCTATCGCAGTCTATCTTGAGCCATG 104631 ||||| | || | ||| ||| || || | || |||| || ||||| || Sbjct 857971 GTATGTCGACCAGGGTGGCAACAAGCGACCCGGTGCTTTTGCCATCTACCTCGAGCCTTG 857912 Query 104632 GCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCG 104691 |||| | ||| || | ||||||||||| | ||| ||||| ||| | ||||||| || Sbjct 857911 GCACTCTGATGTCTTCGAGTTCCTTGATCTCCGTAAGAACCACGGTAAGGAGGAGGTCCG 857852 Query 104692 GTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGA 104751 ||| || || ||| || || ||||| || ||||| || |||||| | ||||| | Sbjct 857851 TGCCCGTGACCTTTTCCTTGCCCTTTGGATCCCTGATCTTTTTATGAAGCGTGTTGAAAA 857792 Query 104752 GAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGG 104811 || || | ||| | || | || || || || ||||| ||| |||| | || Sbjct 857791 GAACGGTGACTGGACACTTATGTGCCCCAACGAGTGCCCTGGCCTCGCCGACTGCTACGG 857732 Query 104812 TGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGC--GACG 104869 |||||||| || || || ||| ||||||||| |||| || | | | | || |||| Sbjct 857731 AGAGGAGTTCGAGGCTCTGTACGAAAAGTACGA-GAAGGCGGGCAAGGGTC-GCAAGACG 857674 Query 104870 GTGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACC 104928 | | || | || | | ||| | || ||||| || | || || ||||| || | || Sbjct 857673 AT-CAAGGCTCAGAAGCTTTGGTACGCCATTCTTGAGGCCCAGACTGAGACCGGAAACCC 857615 Query 104929 ATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGAT 104988 || |||||| |||||||| ||||| |||| |||||||| |||||||| | ||| || Sbjct 857614 ATTCATGCTCTACAAAGATGCCTGCAACCGCAAGAGTAACCAAAAGAACCTCGGTACCAT 857555 Query 104989 CAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGT 105048 | || |||||||| || || ||||| | || | | | || ||| || || Sbjct 857554 CCGAAGCTCCAATCTTTGCACTGAAATTATCGAGTACTGTGCCCCTGACGAGGTCGCCGT 857495 Query 105049 GTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTT-- 105106 || ||||| || || | |||| ||| | | || || | || || Sbjct 857494 CTGCAACCTTGCCTCTCTATCTCTGCCCTCCTTCAT-----CAACTACGATGAGGCTTGC 857440 Query 105107 ---GATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTT 105163 || | | || || ||| | || | | ||| | ||||| |||| | Sbjct 857439 TACGACTTCAAGAAGCTGCACAAGGTCAGTCAGGTTGTTATTCGCAACCTGAACAAGATC 857380 Query 105164 ATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCA 105223 || ||| || ||||| || || ||||| || ||| ||| | ||||| || Sbjct 857379 ATCGATGTGAACCACTACCCTGTCCAGGAGGCTCGCAACAGTAACATGCGCCACCGACCC 857320 Query 105224 ATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATT-CTTTGTCGCCACGCATTTGA 105282 |||||||| |||||||||||||| || |||| ||| || || || ||| | || || Sbjct 857319 ATTGGTCTTGGTGTTCAGGGTCTTGCCGATGCTTTCCTTGCTCTG-CGCATGCCCTTCGA 857261 Query 105283 TTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCT 105342 ||| ||| || || ||||| || || ||||||||||| |||||||| || || Sbjct 857260 GTCCCCCGAGGCTCGTGAGCTCAATAAGCAGATTTTTGAGACCATTTATCACGCTGCGCT 857201 Query 105343 TGAGGC--GAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCT 105400 || || | || |||| ||| || ||||| || ||||| ||||||| Sbjct 857200 GACTGCCTCCGTGC--AGCTGGCTAAGGAAGAGGGTCCCTACTCCACCTTCAAGGGTTCC 857143 Query 105401 CCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTTCACTAC 105460 || || || | || | || || || || |||||| | | || || | || Sbjct 857142 CCCGCCTCTGAGGGTATTCTCCAGTTCGACATGTGGAACGTCAAGCCCTCTGACCTCTGG 857083 Query 105461 GACTGGGAAGCTC-TCAAG-GAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCA 105518 |||||||| ||| || || | | | ||||| | || | || |||||||| ||| Sbjct 857082 GACTGGGAGACTCTTCGAGAGGAAG--TCAAGACACACGGCATCCGCAACAGTCTACTCC 857025 Query 105519 TGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAAC 105578 | ||||| ||||| || ||| ||| | || || |||| || || || ||||| || | Sbjct 857024 TTGCTCCTATGCCTACTGCCAGTACCTCCCAGATTCTGGGCAACAACGAGTGCTTCGAGC 856965 Query 105579 CCTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAACA 105638 ||||||| | || ||||| | | | ||||| || ||||| | |||||||| Sbjct 856964 CCTACACCTCCAATATCTACCAACGCCGTGTTCTCGCTGGTGAGTTCCAGGTTGTCAACC 856905 Query 105639 AGCATCTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTCA 105698 || | | ||||| || || ||||| |||||| | | ||||||| | | || Sbjct 856904 CCTGGCTGCTCAAGGACCTTGTCGACATGGGTCTGTGGTCCGATGCTATGAAGAACCGCA 856845 Query 105699 TGGTGAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAAATGAAATTAAGAAGT 105758 | | | | ||| |||||||| || ||| | || || || | ||| Sbjct 856844 TCATTGCTGAGAATGGATCCATTCAGAACATTCCCAACATCCCTGCCGATGTCAAGGCTC 856785 Query 105759 TGTACCGCACAGTTTGGGAAATCAAGATGAAGGATGTCATTGACATGGCCGCAGATCGTG 105818 |||| || |||||||| ||| | | ||| | | ||||| || ||||| | Sbjct 856784 TGTATAAGACTGTTTGGGAGATCTCTCAGCGCCAGGTCGTCCAGATGGCTGCTGATCGAG 856725 Query 105819 GTCGCTTCATTGATCAAAGTCAAAGT--ATGAATCTCTTCATGGAAAGTCCAACGATGTC 105876 || ||||||||||| |||| ||| |||| || |||| | || |||||| Sbjct 856724 GTGCCTTCATTGATC--AGTCCCAGTCACTGAACATCCACATGAAGGACCCCACGATGGG 856667 Query 105877 CAAGCTCTCTTCTATGCACATGTACA-GTTGGAAGAAGGGTCTCAAAACGGGGATGTATT 105935 |||| || | |||||| | | || | |||||| || ||||| || || ||||| | Sbjct 856666 CAAGATCACCAGCATGCAC-TTTGCAGGCTGGAAGCTTGGCCTCAAGACTGGCATGTACT 856608 Query 105936 ACCTCCGATCTAAGGCAAAGGCGCGCCCAATTCAGTTCAGTCTTGA 105981 |||| || | |||| || || |||||||||| | |||| Sbjct 856607 ACCTTCGTACACAGGCTGCTGCTGCTCCTATTCAGTTCACTGTTGA 856562 >seq179 Length=1646338 Score = 141 bits (156), Expect = 1e-28 Identities = 206/286 (72%), Gaps = 4/286 (1%) Strand=Plus/Minus Query 94672 CTCATAGACAAGTATATTAAGGATGGTGCTGAGAAGAAGCAGCTCTTTGAA-GCCATCCA 94730 ||||| |||| ||||| ||||| || || ||| | | ||| || ||||| | Sbjct 1576107 CTCATCGACACCTATATCAAGGAGCCCGCCCAGC-GAACCTACCTTTTCAACGCCATTGA 1576049 Query 94731 AACAGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT-ACAAAGT 94789 || |||| || || | |||||| || || ||||| || ||| | | | || | Sbjct 1576048 GACCATTCCCTGCATCCGAAAGAAGGCTGACTGGGCCATCCGATGGATCCAAGATAAGGA 1575989 Query 94790 CGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTG 94849 | | ||||||||| | || ||| | || || || |||||||||||||||||| || Sbjct 1575988 CTC-TTCCTTTGCCCAACGCCTCGTTGCTTTCGCTGCCGTTGAGGGTATCTTCTTCAGTG 1575930 Query 94850 GTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCT 94909 || ||||| | | |||| |||||||||||||| ||||||||||| ||||| ||||| Sbjct 1575929 GTGCCTTCGCCTCCATTTTCTGGCTCAAGAAGCGTGGTCTCATGCCTGGTCTGACCTTCT 1575870 Query 94910 CCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 94955 | |||||||| ||||||||||||||||| || ||| || ||||| Sbjct 1575869 CTAACGAGCTCATCTCTCGTGACGAGGGTCTTCACACTGACTTTGC 1575824 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583259436627880