Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20fujikuroi_20[genbank_20GCA_5F001023035.1_202015-06-09] 187 sequences; 43,110,459 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq27 100 2e-16 >seq27 Length=3261259 Score = 100 bits (110), Expect = 2e-16 Identities = 108/143 (76%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || | |||||| | |||||| |||||||| ||||| || ||||| || || ||| Sbjct 1153452 CCACCACGAAGACGGAGCACCAAGTGGAGAGTAGATTCCTTCTGGATGTTGTAGTCGGAA 1153511 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || ||||| | || |||||||| || || ||||| || | |||||||| ||||| || Sbjct 1153512 AGAGTTCGGCCATCCTCAAGTTGCTTGCCAGCAAAGATGAGTCGCTGTTGATCCGGAGGA 1153571 Query 34600 ACTCCCTCCTTGTCTGTGATCTT 34622 | ||||||||||| |||||| Sbjct 1153572 ATACCCTCCTTGTCCTGGATCTT 1153594 Score = 91.5 bits (100), Expect = 9e-14 Identities = 92/120 (77%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 34503 ATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTG 34562 ||| |||||| |||||| |||||||||||||| || || || || |||| ||||| || Sbjct 1153985 ATGAAGAGTGGACTCCTTCTGAATGTTATAATCAGAGAGAGTGCGGCCGTCCTCAAGCTG 1154044 Query 34563 TTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTT 34622 || ||||| || || || || || ||||| || || | ||||||||||| |||||| Sbjct 1154045 CTTGCCGGCGAAAATCAAGCGTTGCTGGTCGGGGGGGATACCCTCCTTGTCCTGGATCTT 1154104 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314728882711571