Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20fujikuroi_20[genbank_20GCA_5F001023035.1_202015-06-09] 187 sequences; 43,110,459 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq145 134 1e-26 seq27 125 5e-24 seq80 95.1 9e-15 >seq145 Length=1022755 Score = 134 bits (148), Expect = 1e-26 Identities = 155/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||||||| || ||| |||||| ||||||||||| ||| || ||| | || || Sbjct 404486 ACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCG 404427 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| || |||||||||| |||||||| || | || | || ||||| ||| Sbjct 404426 AGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGG 404367 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 ||||| ||| | | | |||||||||| || |||||||| | || |||||||| Sbjct 404366 ATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTC 404307 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||||||||||||| ||||| || ||||| Sbjct 404306 CCCGTGAGGGTCTTGACGAAAATCTGCAT 404278 >seq27 Length=3261259 Score = 125 bits (138), Expect = 5e-24 Identities = 156/212 (74%), Gaps = 4/212 (2%) Strand=Plus/Plus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGG--CGAGTTGGCGCTCGTCG 44185 ||||| ||| || || ||||| ||||||||||| |||| ||||| || | || Sbjct 1153469 CACCAAGTGGAGAGTAGATTCCTTCTGGATGTTGTAGTCGGAAAGAGTT--CGGCCATCC 1153526 Query 44186 TCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCC 44245 || || ||||| || |||||||| | ||||| ||||| | ||| | ||| ||||| ||| Sbjct 1153527 TCAAGTTGCTTGCCAGCAAAGATGAGTCGCTGTTGATCCGGAGGAATACCCTCCTTGTCC 1153586 Query 44246 GTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTC 44305 ||||| ||||| | | ||||| |||| || || || |||| ||||| ||| Sbjct 1153587 TGGATCTTGCTCTTCACATTATCAATGGTATCGGATGACTCGACTTCCAGAGTAATGGTC 1153646 Query 44306 TTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||| || |||||||| |||||||||||||| Sbjct 1153647 TTTCCAGTAAGGGTCTTGACGAAGATTTGCAT 1153678 Score = 118 bits (130), Expect = 8e-22 Identities = 148/201 (74%), Gaps = 4/201 (2%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || || ||||| || ||||| ||||||||||| ||||| || || |||| ||| Sbjct 1153698 ACGAGATGAAGGGTAGATTCCTTCTGGATGTTGTAGTCGGCAAGGGTTCGGCCGTCTTCC 1153757 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 || ||||| || ||||| |||| ||||||||| || | ||| | ||| ||||| ||| Sbjct 1153758 AGTTGCTTTCCAGCAAAAATCAGACGCTGCTGGTCAGGAGGGATACCCTCCTTGTCCTGG 1153817 Query 44249 ATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306 |||||| ||| || ||| | ||||| |||| || || ||||| | || || |||| Sbjct 1153818 ATCTTCGACTTAACATTGT--CGATGGTATCGGACGACTCGACCTCGAGAGTGATGGTCT 1153875 Query 44307 TTCCCGTGAGGGTCTTCACGA 44327 | || ||||||||||| |||| Sbjct 1153876 TGCCAGTGAGGGTCTTGACGA 1153896 Score = 105 bits (116), Expect = 5e-18 Identities = 151/210 (72%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCG-GCGAGTTGGCGCTCGTCGTC 44187 || ||||| || || |||||| ||||||||||| ||| | || | ||| | || || Sbjct 1153242 ACGAGGTGGAGAGTTGACTCCTTCTGGATGTTGTAGTCGCTCAAGGT-GCGACCATCTTC 1153300 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 || |||||| || || ||||| | |||||||||||| | || | ||| ||||| ||| Sbjct 1153301 CAACTGCTTACCAGCGAAGATAAGACGCTGCTGATCAGGGGGGATACCCTCCTTATCCTG 1153360 Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 ||||| ||||| | | || ||||| || || ||||| | || || ||||| Sbjct 1153361 AATCTTGCTCTTCACGTTGTCGATAGTGTCACTAGACTCAACCTCAAGAGTGATGGTCTT 1153420 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||| || || ||||||||||| || ||||| Sbjct 1153421 TCCAGTCAGAGTCTTCACGAAAATCTGCAT 1153450 >seq80 Length=892031 Score = 95.1 bits (104), Expect = 9e-15 Identities = 132/183 (72%), Gaps = 4/183 (2%) Strand=Plus/Plus Query 44148 CCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGA 44207 |||| ||||||||||| |||| ||| || | || || || ||||| || || |||| Sbjct 765909 CCTTCTGGATGTTGTAGTCGGAGAGAGTTCGGCCATCCTCGAGTTGCTTACCAGCGAAGA 765968 Query 44208 TCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGT 44265 ||| ||||| || || | || | || ||||| ||| ||||| ||| || ||| Sbjct 765969 TCAGTCGCTGTTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGT 766028 Query 44266 TCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325 | |||||||| | ||| || ||||| | || || ||||| ||||| ||||||||||| Sbjct 766029 --CGATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCAC 766086 Query 44326 GAA 44328 ||| Sbjct 766087 GAA 766089 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359989579559379