Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20fujikuroi_20[genbank_20GCA_5F001023045.1_202015-06-09] 835 sequences; 43,096,072 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq443 114 1e-20 seq68 109 4e-19 seq92 95.1 1e-14 >seq443 Length=545840 Score = 114 bits (126), Expect = 1e-20 Identities = 155/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||| ||| || ||| ||||||||| |||||||||||| |||| ||| | || || Sbjct 425343 ACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCG 425402 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || || || || || |||| ||||| ||||| || || | |||||||||||| Sbjct 425403 AGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGG 425462 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | | |||| | ||||||||| | ||| |||||||| Sbjct 425463 ATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTC 425522 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATGTTGCCT 45343 ||||| || ||||| || || || ||||| |||||| Sbjct 425523 CCCGTGAGGGTCTTGACGAAAATCTGCATCTTGCCT 425558 >seq68 Length=53621 Score = 109 bits (120), Expect = 4e-19 Identities = 152/212 (72%), Gaps = 1/212 (0%) Strand=Plus/Plus Query 45130 CAAG-TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCA 45188 |||| || || ||| |||||||||||||||||| || || ||| |||| || | Sbjct 47781 CAAGATGAAGAGTGGACTCCTTCTGAATGTTGTAATCAGAGAGAGTGCGGCCGTCCTCAA 47840 Query 45189 GTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAA 45248 | || || |||||||| ||||| || || |||||||| || | |||||||||||| || Sbjct 47841 GCTGCTTGCCGGCGAAAATCAAGCGTTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGAA 47900 Query 45249 TTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGC 45308 | || ||| || | | |||| | ||| ||||| | ||| || ||||||| Sbjct 47901 TCTTGGACTTGACGTTGTCGATAGTGTCAGAAGACTCAACCTCGAGGGTGATGGTCTTGC 47960 Query 45309 CCGTCAGAGTCTTCACAAAGATTTGCATGTTG 45340 | ||||| ||||| || ||||| |||||| || Sbjct 47961 CGGTCAGGGTCTTGACGAAGATCTGCATGATG 47992 Score = 84.2 bits (92), Expect = 2e-11 Identities = 78/99 (79%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 45146 TCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAAT 45205 |||||||| |||||||||||| || || |||| |||||||| ||||| || || Sbjct 47516 TCCTTCTGGATGTTGTAGTCGGCAAGGGTTCGGCCGTCTTCCAGTTGCTTTCCAGCAAAA 47575 Query 45206 ATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244 |||| ||||| ||||| ||||| | ||||||||||||| Sbjct 47576 ATCAGACGCTGCTGGTCAGGAGGGATACCCTCCTTGTCC 47614 >seq92 Length=291394 Score = 95.1 bits (104), Expect = 1e-14 Identities = 132/184 (72%), Gaps = 6/184 (3%) Strand=Plus/Plus Query 45147 CCTTCTGAATGTTGTAGTCGTTCAG---TTGGCGATCGTCGTCCAGTTGTTTTCCGGCGA 45203 ||||||| |||||||||||| || | ||| ||| ||| ||||| || || |||| Sbjct 166034 CCTTCTGGATGTTGTAGTCGGAGAGAGTTCGGCCATCCTCG---AGTTGCTTACCAGCGA 166090 Query 45204 ATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCG 45263 | |||| ||||||||||| || || | |||||||||||| || || ||| || Sbjct 166091 AGATCAGTCGCTGTTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACAT 166150 Query 45264 CCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCA 45323 | | | ||||| ||| ||||| | ||| || |||||||||||||| ||||||| Sbjct 166151 TGTCGATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCA 166210 Query 45324 CAAA 45327 | || Sbjct 166211 CGAA 166214 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395071179492535