Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20fujikuroi_20[genbank_20GCA_5F001023045.1_202015-06-09]
835 sequences; 43,096,072 total letters
Query= NC_002816.1
Length=123500
Score E
Sequences producing significant alignments: (Bits) Value
seq443 114 1e-20
seq68 109 4e-19
seq92 95.1 1e-14
>seq443
Length=545840
Score = 114 bits (126), Expect = 1e-20
Identities = 155/216 (72%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||| ||| || ||| ||||||||| |||||||||||| |||| ||| | || ||
Sbjct 425343 ACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCG 425402
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
|| || || || || || |||| ||||| ||||| || || | ||||||||||||
Sbjct 425403 AGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGG 425462
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
|| || ||| || | | | |||| | ||||||||| | ||| ||||||||
Sbjct 425463 ATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTC 425522
Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATGTTGCCT 45343
||||| || ||||| || || || ||||| ||||||
Sbjct 425523 CCCGTGAGGGTCTTGACGAAAATCTGCATCTTGCCT 425558
>seq68
Length=53621
Score = 109 bits (120), Expect = 4e-19
Identities = 152/212 (72%), Gaps = 1/212 (0%)
Strand=Plus/Plus
Query 45130 CAAG-TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCA 45188
|||| || || ||| |||||||||||||||||| || || ||| |||| || |
Sbjct 47781 CAAGATGAAGAGTGGACTCCTTCTGAATGTTGTAATCAGAGAGAGTGCGGCCGTCCTCAA 47840
Query 45189 GTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAA 45248
| || || |||||||| ||||| || || |||||||| || | |||||||||||| ||
Sbjct 47841 GCTGCTTGCCGGCGAAAATCAAGCGTTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGAA 47900
Query 45249 TTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGC 45308
| || ||| || | | |||| | ||| ||||| | ||| || |||||||
Sbjct 47901 TCTTGGACTTGACGTTGTCGATAGTGTCAGAAGACTCAACCTCGAGGGTGATGGTCTTGC 47960
Query 45309 CCGTCAGAGTCTTCACAAAGATTTGCATGTTG 45340
| ||||| ||||| || ||||| |||||| ||
Sbjct 47961 CGGTCAGGGTCTTGACGAAGATCTGCATGATG 47992
Score = 84.2 bits (92), Expect = 2e-11
Identities = 78/99 (79%), Gaps = 0/99 (0%)
Strand=Plus/Plus
Query 45146 TCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAAT 45205
|||||||| |||||||||||| || || |||| |||||||| ||||| || ||
Sbjct 47516 TCCTTCTGGATGTTGTAGTCGGCAAGGGTTCGGCCGTCTTCCAGTTGCTTTCCAGCAAAA 47575
Query 45206 ATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244
|||| ||||| ||||| ||||| | |||||||||||||
Sbjct 47576 ATCAGACGCTGCTGGTCAGGAGGGATACCCTCCTTGTCC 47614
>seq92
Length=291394
Score = 95.1 bits (104), Expect = 1e-14
Identities = 132/184 (72%), Gaps = 6/184 (3%)
Strand=Plus/Plus
Query 45147 CCTTCTGAATGTTGTAGTCGTTCAG---TTGGCGATCGTCGTCCAGTTGTTTTCCGGCGA 45203
||||||| |||||||||||| || | ||| ||| ||| ||||| || || ||||
Sbjct 166034 CCTTCTGGATGTTGTAGTCGGAGAGAGTTCGGCCATCCTCG---AGTTGCTTACCAGCGA 166090
Query 45204 ATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCG 45263
| |||| ||||||||||| || || | |||||||||||| || || ||| ||
Sbjct 166091 AGATCAGTCGCTGTTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACAT 166150
Query 45264 CCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCA 45323
| | | ||||| ||| ||||| | ||| || |||||||||||||| |||||||
Sbjct 166151 TGTCGATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCA 166210
Query 45324 CAAA 45327
| ||
Sbjct 166211 CGAA 166214
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 395071179492535
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |