Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20fujikuroi_20[genbank_20GCA_5F001023045.1_202015-06-09] 835 sequences; 43,096,072 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq705 275 6e-69 seq259 149 6e-31 seq68 118 9e-22 seq443 104 2e-17 >seq705 Length=184299 Score = 275 bits (304), Expect = 6e-69 Identities = 635/954 (67%), Gaps = 2/954 (0%) Strand=Plus/Minus Query 23027 GAGGCAAGATTGCATACGGCCACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACAT 23086 |||||||| ||||| ||||| |||||||| || |||||| | |||||| || || Sbjct 122122 GAGGCAAGGTTGCAGACGGCGACCTCGTCAGGGGCACAGTACTCGATAATTTCAGTGCAA 122063 Query 23087 AGATTGCTACACTTTATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCC 23146 |||||| | || || || | || | ||||| || || || ||||| | ||| Sbjct 122062 AGATTGGAGCTTCGGATGGTACCGAGGTTCTTTTGGTTACTCTTGCGGTTGCAGGCATCT 122003 Query 23147 TTGTAGAGCATGTACGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACATA 23206 |||||||||||| | || | || ||||| ||| | ||| | || || ||| | Sbjct 122002 TTGTAGAGCATGAATGGGTTTCCGGTCTCAGTCTGGGCCTCAAGAATGGCGTACCAAAGC 121943 Query 23207 GTCTGAGCGTGAACACGTCGCACGTACCT-GCCTTCTTCCTCGTACTTTTGGTACAACGC 23265 ||||||| | | |||| || ||| ||| | | ||||||||||| ||||| || Sbjct 121942 TTCTGAGCCTTGAT-CGTCTTGCGACCCTTGCCCGCCTTCTCGTACTTTTCGTACAGAGC 121884 Query 23266 GTCAAATTCGGCACCGTAACAGTCGGCCAGGCCGGGCGATTGCATCGGACACATGAGACT 23325 || || || | ||||| |||||||| ||||| || | | | || ||||| || | Sbjct 121883 CTCGAACTCCTCTCCGTAGCAGTCGGCGAGGCCAGGGCACTCGTTGGGGCACATAAGTGT 121824 Query 23326 CCACATTGAGTCATTTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAA 23385 ||| || |||||||| || ||||||||||||| || ||||| || || ||| Sbjct 121823 CCAGTCACCGTTCTTTTCAACACGCTTCATAAAAAGATCAGGGATCCAAAGGGCAAGGAA 121764 Query 23386 CAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAA 23445 || || ||||| || |||||||| || ||| |||||| | ||| | || || || Sbjct 121763 AAGGTCACGGGCACGGACCTCCTCCTTACCGTGGTTCTTACGGAGATCAAGGAACTCGAA 121704 Query 23446 CACGTCCGCATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCC 23505 || || | ||||| ||||||||||| | |||||| || || |||| ||| ||||| || Sbjct 121703 GACATCAGAGTGCCAAGGCTCGAGGTAGATGGCAAAAGCACCGGGTCGCTTGTTGCCACC 121644 Query 23506 CTGATCGACGTAACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGA 23565 ||| ||||| || || || ||||||||| | || | ||||| || |||| |||||| || Sbjct 121643 CTGGTCGACATACCGAGCAGTGTTGTTGAAGACACGAAGCATAGGAACGACACCGTTCGA 121584 Query 23566 CGCGCCGCCTACGCCCGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACC 23625 | ||| || || | || || | || || | ||| || | | ||| Sbjct 121583 TGTACCGTTGGTACCGGCGATGTATGAGCCAGTAGCACGGATACGGTGCACATTCAGACC 121524 Query 23626 TATGCCTCCGCCCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTC 23685 || || || || || || ||||| || || || ||||| |||||||| ||||| Sbjct 121523 AATACCACCAGCCATCTTGGAGATCATGGCACAGGTCTTGAGAGTATCGTAGATTCCCTC 121464 Query 23686 GATGCTGTCCTCTTTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGC 23745 || ||||| || || | | |||||||| || || |||| ||| | | || || | Sbjct 121463 AATACTGTCGTCCTTCATATCAACCAAGAAGCAAGATGACAATTGGGGCTGAGGGGTGCC 121404 Query 23746 GGCCGAGAACAGTGTCGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGT 23805 ||| ||| || || ||| || ||||| ||| | | ||||| || ||||| || Sbjct 121403 GGCATTGAAGAGCGTGGGGGAAGCATGCGTGAAGAACTTGCTTGACATCAGGTTGTATGT 121344 Query 23806 GTCGATGGCGGCATCAATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTA 23865 || | | | || || || || || ||||| | | || ||||| ||||||| Sbjct 121343 CTCCAAGACTCGCTCGATATCATCACCCCAGATACCAACAGACACACGCATGATCATGTG 121284 Query 23866 TTGAGGTCTCTCGACCGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTT 23925 || || | |||||| | |||| ||| |||| || ||||| || | || || || Sbjct 121283 CTGTGGGCGCTCGACAATCTTACCGTCAATCTTGAGGAGGTATGATCGCTCCAAAGTCTT 121224 Query 23926 AAATCCAAAATAGTCATAGTTAAAGTCACGATCGTGCACTATGGCCGAATTCAA 23979 || ||||| || | || | || || || || | || ||||| || | ||| Sbjct 121223 GAAGCCAAAGTATTGGTATTGGAAATCGCGGTCATAGACAATGGCAGAGTCCAA 121170 Score = 82.4 bits (90), Expect = 7e-11 Identities = 184/273 (67%), Gaps = 9/273 (3%) Strand=Plus/Minus Query 22397 TTTTTAATCGTATCGTTCCACAAACCGATGGCGGTCAAATCTTTGACCAGATGACGGTTC 22456 || || || | |||| ||||| ||| ||| || | || |||| ||| |||| Sbjct 122752 TTCTTCATAGCATCGGACCACAGACCCATGTCGACAAGGTCCTTGAGCAGCCAGGGGTTA 122693 Query 22457 ACCACTTGAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCG 22516 || || |||||||| || | | || ||||||||||| || ||||| ||| | || ||| Sbjct 122692 ACAACCTGAAACTCACCAGCGAGAACACGGCGTTGGTAGATATTGGAGGTGTAGGGCTCG 122633 Query 22517 AAAGATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACAGT 22576 || | || ||||| ||||| ||||| | ||| || || ||||| || || | ||| Sbjct 122632 AAGCACTCGTTGTTGCCCAGAATCTGGGAGGTACTGGCAGTAGGCATAGGAGCAAGGAGT 122573 Query 22577 AGCGAGTTTCTCAAGCC--GTGCTTTGAAATTTTACTCTTG-AGCATCGACCAGTCCCAC 22633 || ||| | | ||| ||| |||| || |||| | || || ||||||||| Sbjct 122572 AGACTGTTGCGGATGCCGTGTGTCTTGA---CTTCCTCTCGAAGAGTCTCCCAGTCCCAG 122516 Query 22634 AGATCGGACGGCGTCACATTGTCCCACATATCG 22666 || || || ||| | || || |||||| ||| Sbjct 122515 AGGTCAGAGGGCTTGAC---GTTCCACATGTCG 122486 >seq259 Length=112471 Score = 149 bits (164), Expect = 6e-31 Identities = 557/862 (65%), Gaps = 31/862 (4%) Strand=Plus/Minus Query 57570 ATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTG 57629 |||||| | |||||||| ||||| || || || || ||||| | || || | ||||| Sbjct 41908 ATTTGGCAAATGTACAAGAAGGCTGAGGCTTCCTTCTGGACTGCTGAGGAGATTGACCTC 41849 Query 57630 TCTAAGGATCTGAGCGATTGGGATTCCCTCAAAGAAT-CTGA-GAGAAATTTTA--TTAA 57685 ||||||||||| ||| ||| | || | || | | || ||| | || | | Sbjct 41848 TCTAAGGATCTCCACGACTGGAACAACCGCCT-GACTGCCGATGAGCAGTTCTTCGTCTC 41790 Query 57686 ACACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAG 57745 ||| | | || || ||||| || || ||||||||||| |||||||| | ||||| | Sbjct 41789 TCACATCCTTGCTTTCTTCGCTGCCTCTGATGGTATTGTCAACGAGAACCTCGTCGAGCG 41730 Query 57746 ATTTTCACAAGAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCAT 57805 ||| || || || | | ||||| | || || ||||| || || | || Sbjct 41729 ATTCAGTGGCGAGGTCCAGATCCCCGAGGCTCGTTGTTTCTACGGCTTCCAGATCATGAT 41670 Query 57806 TGAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGACAACGA 57865 || ||| | || || || | || || || |||||||| || || | ||||| || Sbjct 41669 GGAGAACATTCACTCCGAGACCTACTCCCTCCTCATCGACACCTATATCAAGGAGCCCGC 41610 Query 57866 CGAGA-AACGTAGACTGTTCAACGCGATCGAAACAATGCCCGCGATCGCCAAGAAGGCAG 57924 | || ||| || || |||||||| || || || || ||| ||| |||||||| | Sbjct 41609 CCAGCGAACCTAC-CTTTTCAACGCCATTGAGACCATTCCCTGCATCCGAAAGAAGGCTG 41551 Query 57925 AGTGGTCAATCAAATGGATAAAAAGCGCCACGGCCACGTTC---GCCGAGAGGCTAATCG 57981 | ||| | ||| |||||| || | | || | | | | ||| | | || | | Sbjct 41550 ACTGGGCCATCCGATGGATCCAA---GATAAGGACTCTTCCTTTGCCCAACGCCTCGTTG 41494 Query 57982 CGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATGA 58041 | ||||| ||||| || ||||| ||||| || ||| || | || || ||| | | Sbjct 41493 CTTTCGCTGCCGTTGAGGGTATCTTCTTCAGTGGTGCCTTCGCCTCCATTTTCTGGCTCA 41434 Query 58042 AGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAGG 58101 |||| || || || ||||| || ||||| || |||||| | || || || ||||||| Sbjct 41433 AGAAGCGTGGTCTCATGCCTGGTCTGACCTTCTCTAACGAGCTCATCTCTCGTGACGAGG 41374 Query 58102 GTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTCAATAAACCGACGCGGG 58161 |||| || ||||| ||||| ||||| | |||||||| |||| | || | Sbjct 41373 GTCTTCACACTGACTTTGCCTGCCTCCTCCACTCTCAC-------CTAAAGGGCCGTGCC 41321 Query 58162 ATC--GC-----ATCTTGGACATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTC 58214 | | || || || || ||||| || || ||| | || ||| | ||||| || Sbjct 41320 AGCAAGCAGATGATTCAAGATATCATCACTGATGCCGTCACCATTGAACAGGAGTTCCTC 41261 Query 58215 ACCGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTACATT 58274 || || || || || ||| | ||||| |||||| ||| | ||| |||||||| Sbjct 41260 ACTGAGGCTCTTCCCTGTGCCCTTCTCGGCATGAACTCTGACCTCATGAAGCAGTACATT 41201 Query 58275 GAGTTTGTTGCCGACAGACTTTTGCTCGAACT--GATTGGAGAGCGTCATTACAACACGA 58332 ||||| || || || | || | ||| || | |||| ||| ||||| | | Sbjct 41200 GAGTTCGTCGCTGATCGTCTCCTTGTCGCTCTTGGCAACGAGAAGGTC--TACAAGGCCA 41143 Query 58333 AAAATCCGTTTGATTTTATGAATCTGATCTCGCTCGAGGGCAAGACAAACTTTTTCGaaa 58392 || || || || || ||| | ||||| || | |||||||| ||||| ||||| | Sbjct 41142 CCAACCCCTTCGACTTCATGGAAAACATCTCCCTTGGCGGCAAGACCAACTTCTTCGAGA 41083 Query 58393 aaaaaGTTAGCGAATATCAAAA 58414 | ||| ||| || ||||| Sbjct 41082 AGCGTGTTGCCGACTACCAAAA 41061 >seq68 Length=53621 Score = 118 bits (130), Expect = 9e-22 Identities = 154/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || ||||| ||||| ||||| ||||| || |||||| |||| ||||| | || Sbjct 47989 CATGCAGATCTTCGTCAAGACCCTGACCGGCAAGACCATCACCCTCGAGGTTGAGTCTTC 47930 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| | |||| | ||||| | || ||||||||| ||| | || |||||||| Sbjct 47929 TGACACTATCGACAACGTCAAGTCCAAGATTCAGGACAAGGAGGGCATCCCCCCCGACCA 47870 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||| || | || ||||| ||||| ||| | || ||| ||| | ||||| || Sbjct 47869 GCAACGCTTGATTTTCGCCGGCAAGCAGCTTGAGGACGGCCGCACTCTCTCTGATTACAA 47810 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 |||||| || || || ||||||||||| || || Sbjct 47809 CATTCAGAAGGAGTCCACTCTTCATCTTGTTCT 47777 Score = 89.7 bits (98), Expect = 5e-13 Identities = 141/202 (70%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 31203 TCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTCG 31262 |||| ||||| || || ||||| || ||||| |||| || || ||||||| | ||| Sbjct 47696 TCGTCAAGACCCTCACTGGCAAGACCATCACTCTCGAGGTCGAGTCGTCCGATACCATCG 47637 Query 31263 AAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTAA 31322 | | || || || || ||||||||| || | || || |||||||||||||| | Sbjct 47636 ACAATGTTAAGTCGAAGATCCAGGACAAGGAGGGTATCCCTCCTGACCAGCAGCGTCTGA 47577 Query 31323 TATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAAAG 31382 | || ||||| || || |||||||| || | ||| || ||||| || || | Sbjct 47576 TTTTTGCTGGAAAGCAACTGGAAGACGGCCGAACCCTTGCCGACTACAACATCCAGAAGG 47517 Query 31383 AATCGACTCTTCATCTGGTACT 31404 |||| || |||||||| || || Sbjct 47516 AATCTACCCTTCATCTCGTCCT 47495 Score = 86.0 bits (94), Expect = 6e-12 Identities = 112/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| |||||||| ||||||||||| || || || ||||| | || ||||| | Sbjct 47250 ATGCAGATTTTCGTGAAGACTCTGACTGGAAAGACCATCACTCTTGAGGTTGAGTCTAGT 47191 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | |||| | || || | || ||| ||||| || | || || || ||| Sbjct 47190 GACACTATCGACAACGTGAAGAGCAAGATTCAGGATAAGGAGGGTATCCCCCCTGATCAG 47131 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA 31347 |||||||| || |||||||| || ||||||||||| Sbjct 47130 CAGCGTCTTATCTTCGCTGGTAAGCAGTTGGAAGA 47096 >seq443 Length=545840 Score = 104 bits (114), Expect = 2e-17 Identities = 152/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249 || ||||| |||||||| ||||| || || || || ||||||||| | || || || | Sbjct 425554 AAGATGCAGATTTTCGTCAAGACCCTCACGGGGAAGACGATCACCCTTGAGGTGGAGTCT 425495 Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309 ||||||| |||| | ||||| | || ||||||||| ||| | || || ||| Sbjct 425494 TCCGACACCATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCTGAC 425435 Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369 |||||||| || || || |||||||| ||| | || || || ||||||| || Sbjct 425434 CAGCAGCGCCTGATCTTTGCTGGCAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTAC 425375 Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||||| || || || || || || || ||||| || Sbjct 425374 AACATCCAGAAGGAGTCCACCCTCCACCTGGTCCT 425340 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445761747313200