Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20fujikuroi_20[genbank_20GCA_5F001023045.1_202015-06-09] 835 sequences; 43,096,072 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq68 100 2e-16 >seq68 Length=53621 Score = 100 bits (110), Expect = 2e-16 Identities = 149/207 (72%), Gaps = 6/207 (3%) Strand=Plus/Plus Query 48523 ATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCA-ATTGTCGCTCGTCCTCCAGCT 48581 |||||| ||| |||||| |||||||||||||||| | | || || ||||||| |||| Sbjct 47785 ATGAAGAGTGGACTCCTTCTGAATGTTGTAATCAGAGAGAGTG-CGGCCGTCCTCAAGCT 47843 Query 48582 GCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTT 48641 |||| ||| || |||| || || ||||| || || | | ||||||||| ||| | Sbjct 47844 GCTTGCCGGCGAAAATCAAGCGTTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGAATCT 47903 Query 48642 TCTGCTTGA--TAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACC 48699 | ||||| | | || || || || | |||||| ||||| || ||||| || || Sbjct 47904 TGGACTTGACGTTGTCG--ATAGTGTCAGAAGACTCAACCTCGAGGGTGATGGTCTTGCC 47961 Query 48700 GGTGAGAGTTTTCACAAAAATCTGCAT 48726 ||| || || || || || |||||||| Sbjct 47962 GGTCAGGGTCTTGACGAAGATCTGCAT 47988 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421246913110835