Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20fujikuroi_20[genbank_20GCA_5F001023045.1_202015-06-09] 835 sequences; 43,096,072 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq705 387 4e-102 >seq705 Length=184299 Score = 387 bits (428), Expect = 4e-102 Identities = 1124/1700 (66%), Gaps = 48/1700 (3%) Strand=Plus/Plus Query 363400 AAGACGATGGAGAAATCCTACCTATCTCGT-ATCAATGGTGATATTGTTGAACGCCCGCA 363458 ||||| ||||| ||| ||||| ||| || | ||| | ||||| || ||||| || Sbjct 121224 AAGACTTTGGAGCGATCATACCTC-CTCAAGATTGACGGTAAGATTGTCGAGCGCCCACA 121282 Query 363459 GCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATGCCG--CGATT 363516 ||| ||| | |||||||| || |||||||| || || || |||| || ||| | Sbjct 121283 GCACATGATCATGCGTGTGTCTGTTGGTATC---TG---GGGTGATGATATCGAGCGAGT 121336 Query 363517 ----GAAACATATAAGCT--TCTAAGTGCTCGTGTATTCACGCACGCCACGCCAACAATG 363570 || ||||| || || | | | || || | |||||||| || | || || | Sbjct 121337 CTTGGAGACATACAACCTGATGTCAA-GCAAGT-TCTTCACGCATGCTTCCCCCACGCTC 121394 Query 363571 TACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAGGAC 363630 | |||||| || || | | | || || |||| |||||||| | | | ||||||||| Sbjct 121395 TTCAATGCCGGCACCCCTCAGCCCCAATTGTCATCTTGCTTCTTGGTTGATATGAAGGAC 121454 Query 363631 GATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAATGCA 363690 || || ||||| |||| || || || |||| ||||| | || ||||||| || Sbjct 121455 GACAGTATTGAGGGAATCTACGATACTCTCAAGACCTGTGCCATGATCTCCAAGATGGCT 121514 Query 363691 GGCGGAATTGGTGTATCGATCCACAATGTTCGTGC-ACAGAACAGTTACATTCGCGGCAC 363749 || || |||||| | | ||| | | ||||| || | | ||||| ||| || Sbjct 121515 GGTGGTATTGGTCTGAATGTGCACCGTATCCGTGCTACTGG-CTCATACATCGCCGGTAC 121573 Query 363750 AGGGGGATAC-TCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAGGT 363808 || ||| ||||| || | ||||| ||||||||||| || |||| ||||| ||| Sbjct 121574 CAACGG-TACATCGAACGGTGTCGTTCCTATGCTTCGTGTCTTCAACAACACTGCTCGGT 121632 Query 363809 ACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCATC 363868 | |||||||||||||| ||||| || || ||||| || || ||||||||| | Sbjct 121633 ATGTCGACCAGGGTGGCAACAAGCGACCCGGTGCTTTTGCCATCTACCTCGAGCCTTGGC 121692 Query 363869 ATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGCGTG 363928 | | ||| | || ||||| ||||| ||||| || ||| || || ||||| | |||| Sbjct 121693 ACTCTGATGTCTTCGAGTTCCTTGATCTCCGTAAGAACCACGGTAAGGAGGAGGTCCGTG 121752 Query 363929 CACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAGGCAG 363988 | ||||| || ||| ||| |||||| | |||| | |||||||||||| || || | Sbjct 121753 CCCGTGACCTTTTCCTTGCCCTTTGGATCCCTGATCTTTTTATGAAGCGTGTTGA--AAA 121810 Query 363989 GTAAG--AATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTATGGGG 364046 | | | | ||| |||| | ||||| |||| || || || || |||| | || Sbjct 121811 GAACGGTGACTGGACACTTATGTGCCCCAACGAGTGCCCTGGCCTCGCCGACTGCTACGG 121870 Query 364047 TGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAAGACAAT 364106 || || | | ||||| ||||||||||| || || ||| |||| ||| ||||| || Sbjct 121871 AGAGGAGTTCGAGGCTCTGTACGAAAAGTACGAGAAGGCGGGCAAGGGTCGCAAGACGAT 121930 Query 364107 TCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCCTA 364166 || |||||||| |||| ||||| | || | |||| |||||| |||| || | Sbjct 121931 CAAGGCTCAGAAGCTTTGGTACGCCATTCTTGAGGCCCAGACTGAGACCGGAAACCCATT 121990 Query 364167 TATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCA 364226 ||| | ||||||||| | |||||||||||| ||||| || |||| ||||| | || Sbjct 121991 CATGCTCTACAAAGATGCCTGCAACCGCAAGAGTAACCAAAAGAACCTCGGTACCA-TCC 122049 Query 364227 GCAG-AGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCCGTAT 364285 | || ||| || || || || ||||| || ||| || || |||||| ||||| | Sbjct 122050 GAAGCTCCAATCTTTGCACTGAAATTATCGAGTACTGTGCCCCTGACGAGGTCGCCGTCT 122109 Query 364286 GTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGTAA---AAGATGGTACT---TTTGACC 364339 | |||||||| || | | || || | || | | | |||| || | ||| Sbjct 122110 GCAACCTTGCCTCTCTATCTCTGCCCTCCTTCATCAACTACGATGAGGCTTGCTACGACT 122169 Query 364340 ACCAGCATCTTTATGACGTAACCTATCATGCTACTTGCAATCTCGACAAGGTTATCGACA 364399 | || | || | | || | | || || | |||| || ||||| | ||||| Sbjct 122170 TCAAGAAGCTGCACAAGGTCAGTCAGGTTGTTATTCGCAACCTGAACAAGATCATCGATG 122229 Query 364400 AGAATTATTATCCAATTCCTGAAGCCGAGC-GTTCTAATATGCGTCATCGCCCGATTGGT 364458 ||| | || || ||| | || | || ||| ||||| || || || |||||| Sbjct 122230 TGAACCACTA-CCCTGTCCAGGAGGCTCGCAACAGTAACATGCGCCACCGACCCATTGGT 122288 Query 364459 CTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTC--AAGATGGCATTTGATTCGC 364516 |||||||| ||||| || || || | ||| | ||||| ||| | || || || | Sbjct 122289 CTTGGTGTTCAGGGTCTTGCCGATGCTTTCCT--TGCTCTGCGCATGCCCTTCGAGTCCC 122346 Query 364517 CTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAATGACTG 364576 | || ||||||| || |||||| |||| ||||| || || ||| || || |||||| Sbjct 122347 CCGAGGCTCGTGAGCTCAATAAGCAGATTTTTGAGACCATTTATCACGCTGCGCTGACTG 122406 Query 364577 -CTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTACTTATGAGGGGTCCCCTCTT 364635 || |||| | |||| || |||| ||||| || | |||| ||||| Sbjct 122407 CCTCCGTG-CAGCTGGCTAAGGAAGAGGGTCCCTACTCCACCTTCAAGGGTTCCCCCGCC 122465 Query 364636 TCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCGATGGAACTGG 364695 || |||| | ||||||| || | ||||| |||| ||| |||| || ||| ||||| Sbjct 122466 TCTGAGGGTATTCTCCAGTTCGACATGTGGAACGTCAAGCCCTCTGACCTCTGGGACTGG 122525 Query 364696 GATACGCTACGTTCCAACGTTAAGAAGCATGGTACTCGCAAC--TC-CCTCGTTACAGCG 364752 || || || || | || |||| || || | |||||| || ||| || || Sbjct 122526 GAGACTCTTCGAGAGGAAGTCAAGACACACGGCATCCGCAACAGTCTACTCCTT---GCT 122582 Query 364753 CCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGAACCGTTT 364812 || ||||| || || ||| | ||||| || || ||||||||||||||||| || | Sbjct 122583 CCTATGCCTACTGCCAGTACCTCCCAGATTCTGGGCAACAACGAGTGCTTCGAGCCCTAC 122642 Query 364813 ACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATAAGTAC 364872 || |||| | || |||||| ||||| | || || |||| ||| ||||| | Sbjct 122643 ACCTCCAATATCTACCAACGCCGTGTTCTCGCTGGTGAGTTTCAGGTTGTTAACCCCTGG 122702 Query 364873 CTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACTATATCATC 364932 || ||||||| ||| |||| || |||||| || ||||||||| ||||| Sbjct 122703 CTGCTCAAGGACCTTGTCGACATGGGTCTGTGGTCCGATGCTATGAAGAACCGCATCATT 122762 Query 364933 GCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCTGAAGCCTATTTAC 364992 || | ||||| || | ||||||||||| | || | ||| | ||| || | || Sbjct 122763 GCTGAGAATGGATCCATTCAGAACATTCCCAACATCCCTGCCGATGTCAAGGCTCTGTAT 122822 Query 364993 AAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGGCCGATCGCGGTGCT 365052 || || || ||||| || || ||| || | | ||||| || ||||| ||||| Sbjct 122823 AAGACTGTTTGGGAGATCTCTCAGCGCCAGGTCGTCCAGATGGCTGCTGATCGAGGTGCC 122882 Query 365053 TTTATCTGTCAGAGCCAGTC 365072 || || |||| |||||| Sbjct 122883 TTCATTGATCAGTCCCAGTC 122902 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303339656152970