Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20fujikuroi_20[genbank_20GCA_5F001023045.1_202015-06-09] 835 sequences; 43,096,072 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq259 354 2e-92 seq705 309 6e-79 >seq259 Length=112471 Score = 354 bits (392), Expect = 2e-92 Identities = 593/845 (70%), Gaps = 18/845 (2%) Strand=Plus/Minus Query 42309 ATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTGGCCAAGGAC 42368 |||||||||||||| || ||| |||||| || |||||||||||||| | ||||| Sbjct 41899 ATGTACAAGAAGGCTGAGGCTTCCTTCTGGACTGCTGAGGAGATTGACCTCTCTAAGGAT 41840 Query 42369 ACGGCCGGCTGGGAGTCA-----CTGTCTGAGAACGAAAAGTTTTTCCTCAAAAACATAC 42423 || |||| | || ||| ||| | || |||| ||| || |||| | Sbjct 41839 CTCCACGACTGGAA--CAACCGCCTGACTGCCGATGAGCAGTTCTTCGTCTCTCACATCC 41782 Query 42424 TGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGGTTCATGA 42483 | || |||||||| |||||||| || || ||||| |||||||| | | | |||| Sbjct 41781 TTGCTTTCTTCGCTGCCTCTGATGGTATTGTCAACGAGAACCTCGTCGAGCGATTCAGTG 41722 Query 42484 AAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATAGAGAACG 42543 ||||| ||| | ||||| || || ||||||||||||||||| || |||||| Sbjct 41721 GCGAGGTCCAGATCCCCGAGGCTCGTTGTTTCTACGGCTTCCAGATCATGATGGAGAACA 41662 Query 42544 TGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGTCGAGCGTA 42603 | ||||| ||| ||| || || || |||| || ||| ||| |||| | |||| | Sbjct 41661 TTCACTCCGAGACCTACTCCCTCCTCATCGACACCTATATCAAGGAGCCCGCCCAGCGAA 41602 Query 42604 ACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGCGC 42663 | || ||||| ||||| ||||| || ||||||||| |||||||| |||||||| Sbjct 41601 CCTACCTTTTCAACGCCATTGAGACCATTCCCTGCATCCGAAAGAAGGCTGACTGGGCCA 41542 Query 42664 TCAACTGGATCGAGAGTCCCGACGCAACGTTCGGCGAGAGGCTGGTAGCCTTTACCGCCG 42723 || |||||| | | ||| | | || | | | | || || || || | |||| Sbjct 41541 TCCGATGGATCCAAGATAAGGACTCTTCCTTTGCCCAACGCCTCGTTGCTTTCGCTGCCG 41482 Query 42724 TCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAG-AAGGTG 42782 | ||||| ||||||||| || |||||||||||||| |||||||||||| || ||| Sbjct 41481 TTGAGGGTATCTTCTTCAGTGGTGCCTTCGCCTCCATTTTCTGGCTCAAGAAGCGTGGTC 41422 Query 42783 TCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATAGG 42842 || ||||| || || |||||||| ||||| |||||| | |||||||| || || | Sbjct 41421 TC-ATGCCTGGTCTGACCTTCTCTAACGAGCTCATCTCTCGTGACGAGGGTCTTCACACT 41363 Query 42843 GACTTTGCCTGCCTCCTGTTCTCGAGCCACCT-CAGGCACAAGCCCTCGAAGGAGCGGGT 42901 ||||||||||||||||| ||| ||||| ||| | ||| | ||| || | | Sbjct 41362 GACTTTGCCTGCCTCCTCCACTC---TCACCTAAAGGGCCGTGCCAGC-AAGCAGATGAT 41307 Query 42902 CCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACGCAGTCGCTGCC 42961 | | |||||||| || ||||| || || ||||||||||||| || | || || Sbjct 41306 TCAAGATATCATCACTGATGCCGTCACCATTGAACAGGAGTTCCTCACTGAGGCTCTTCC 41247 Query 42962 C-GTGTCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTACATCCAGTACGTCGCCG 43020 | ||| |||| ||||||||||| ||||||||| ||||||| ||| |||||| | Sbjct 41246 CTGTG-CCCTTCTCGGCATGAACTCTGACCTCATGAAGCAGTACATTGAGTTCGTCGCTG 41188 Query 43021 ACCATCTCC-TGTGCCAGATGGGTCTCAGCCGCCTCTACAACACGCCGTGCCCCTTCGAC 43079 | | ||||| ||| | ||| || | ||||||| | | |||||||||| Sbjct 41187 ATCGTCTCCTTGTCGCTCTTGGCAACGAGAAG-GTCTACAAGGCCACCAACCCCTTCGAC 41129 Query 43080 TTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGAAGCGCGTCGCCGAC 43139 || ||||| |||||||| | | |||||||||||||| ||||||||||| || |||||| Sbjct 41128 TTCATGGAAAACATCTCCCTTGGCGGCAAGACCAACTTCTTCGAGAAGCGTGTTGCCGAC 41069 Query 43140 TACCA 43144 ||||| Sbjct 41068 TACCA 41064 >seq705 Length=184299 Score = 309 bits (342), Expect = 6e-79 Identities = 885/1343 (66%), Gaps = 41/1343 (3%) Strand=Plus/Minus Query 244090 GTTCACCACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGG 244149 ||| || ||||||||||| || | || || ||||| ||||||| ||| | || || Sbjct 122696 GTTAACAACCTGAAACTCACCAGCGAGAACACGGCGTTGGTAGATATTGGAGGTGTAGGG 122637 Query 244150 CTCGATGCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACAC 244209 ||||| || ||| |||||||||| ||||| | || || ||||| ||||| || | | Sbjct 122636 CTCGAAGCACTCGTTGTTGCCCAGAATCTGGGAGGTACTGGCAGTAGGCATAGGAGCAAG 122577 Query 244210 CAGCAGACTGTTCCTCACGCCGTGCCTCTGGA-TGCGGAGTCTGAGCTCGTTCCAGTCCC 244268 || |||||||| | | |||||| ||| || | | || |||| |||| | Sbjct 122576 GAGTAGACTGTTGCGGATGCCGTGTGTCTTGACTTC-----CT---CTCGAAG-AGTCTC 122526 Query 244269 ACATGCCCGAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGC 244328 || ||| ||||||| | | |||| | ||||||||| ||||| || | |||| Sbjct 122525 CCAGTCCC-AGAGGTCAGAGGGCTTGACGTTCCACATGTCGAACTGGAGAATACCCTCAG 122467 Query 244329 TGACGGGGCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTT-ACAGCTC 244387 | ||||| |||| | |||| | ||||||||| || || ||||||| || | Sbjct 122466 AGGCGGGGGAACCCTTGAAGGTGGAGTAGGGACCCTCTTCCTTAGCCAGCTGCACGGAGG 122407 Query 244388 TCGTCGAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTG 244447 ||| || || |||| || |||||||| || ||| ||| || | || || |||| | Sbjct 122406 CAGTC-AGCGCAGCGTGATAAATGGTCTCAAAAATCTGCTTATTGAGCTCACGAGCCTCG 122348 Query 244448 CCGCAGGTGAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATG 244507 | | |||||| |||| || | ||| | ||||| || ||||| || || | Sbjct 122347 GGGGACTCGAAGGGCATGCGCAGAGCAAGGAAAGCATCGGCAAGACCCTGAACACCAAGA 122288 Query 244508 CCGATGGGTCTGTGTCGCTTGTTGGAGC-GCATGGCTTCGGGCACGGGGTAAAAGTTGCC 244566 || ||||||| ||| ||| |||| | || | || | || || ||||| ||| | Sbjct 122287 CCAATGGGTCGGTGGCGCATGTTACTGTTGCGAGCCTCCTGG-ACAGGGTAGTGGTTCAC 122229 Query 244567 GTCGATCACCTTGTTGAGGTTGCGGGTGATCATGCGGAC-GACGTCGGCCAGCAGCTGAA 244625 ||||| | |||||| |||||||| | | || | ||| ||| | | |||| || | Sbjct 122228 ATCGATGATCTTGTTCAGGTTGCGAATAA-CAACCTGACTGACCTTGTGCAGCTTCTTGA 122170 Query 244626 AGTCGTACTCGTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGACGC 244685 ||||||| | | | || ||| | || ||| | | | || | || Sbjct 122169 AGTCGTA---GCAAGCCTCATCGTAGTTGATGA-----AGGAGGGCAGAGATAGAGA--- 122121 Query 244686 TGGCCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGA 244745 ||| |||||||||||||| ||||| || | | ||||| || ||| || ||||| | Sbjct 122120 -GGCAAGGTTGCAGACGGCGACCTCGTCAGGGGCACAGTACTCGATAATTTCAGTGCAAA 122062 Query 244746 GGTTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCT 244805 | || || |||||| || |||| || || || |||| ||||||||| || | Sbjct 122061 GATTGGAGCTTCGGATGGTACCGAGGTTCTTTTGGTTACTCTTGCGGTTGCAGGCATCTT 122002 Query 244806 TGTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGT 244865 ||||||||||||| || |||||||| |||||| | || | | || ||| || | Sbjct 122001 TGTAGAGCATGAATGGGTTTCCGGTCTCAGTCTGGGCCTCAAGAATGGCGTACCAAAGCT 121942 Query 244866 CCCTAGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCT 244925 | |||||||| |||| ||||| |||||||| | |||||| |||||| |||| Sbjct 121941 TCTGAGCCTTGATCGTCTTGCGACCCTTGCCCGCCTTCTCGTACTTTTCGTACAGAGCCT 121882 Query 244926 CGAACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCACATGAGACTCC 244985 ||||||| || || ||| | ||||| |||||| |||||||| || ||| Sbjct 121881 CGAACTCCTCTCCGTAGCAGTCGGCGAGGCCAGGGCACTCGTTGGGGCACATAAGTGTCC 121822 Query 244986 ACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGA 245045 | || ||| | | || | || ||| || || || |||||||| ||||| |||| | Sbjct 121821 AGTCACCGTTCTTTTCAACACGCTTCATAAAAAGATCAGGGATCCAAAGGGCAAGGAAAA 121762 Query 245046 GGTCCCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGA 245105 |||| | || | ||| ||| || |||||| | || || | || || |||| Sbjct 121761 GGTCACGGGCACGGACCTCCTCCTTACCGTGGTTCTTACGGAGATCAAGGAACTCGAAGA 121702 Query 245106 CGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCT 245165 | || |||||| ||||| | ||||| || | || ||||| ||||||||||| |||| Sbjct 121701 CATCAGAGTGCCAAGGCTCGAGGTAGATGGCAAAAGCACCGGGTCGCTTGTTGCCACCCT 121642 Query 245166 GGTCCACCATCCTCTCGAGC----GCGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTA 245221 |||| | ||| | ||||| |||||||| || || |||| || | ||||| Sbjct 121641 GGTCGA-CATAC---CGAGCAGTGTTGTTGAAGACACGAAGCATAGGAACGACACCGTTC 121586 Query 245222 GAGTGGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTG--AGGTTGCTGATGGACA 245279 || |||||||| || |||||| | ||| | | | | | | ||| || || Sbjct 121585 GATGTACCGTTGGTACCGGCGATGTATGAGCCAGTAGCACGGATACGGTGCACAT--TCA 121528 Query 245280 TGCCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGC 245339 || | || || || ||||||||| | ||| ||| |||||| || || || | Sbjct 121527 GACCAATACCACCAGCCATCTTGGAGATCATGGCACAGGTCTTGAGAGTATCGTAGATTC 121468 Query 245340 CCTCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGC 245399 |||| || ||||| |||||| | | || ||||| || |||| ||||||| ||| Sbjct 121467 CCTCAATACTGTCGTCCTTCATATCAACCAAGAAGCAAGATGACAATTGGGGCTGAGGGG 121408 Query 245400 TGCACGAGTTGAACAGAGTGGGG 245422 ||| | ||||| || |||||| Sbjct 121407 TGCCGGCATTGAAGAGCGTGGGG 121385 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944329343459600