Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20fujikuroi_20[genbank_20GCA_5F001023045.1_202015-06-09] 835 sequences; 43,096,072 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq68 86.0 5e-12 >seq68 Length=53621 Score = 86.0 bits (94), Expect = 5e-12 Identities = 152/219 (69%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 33910 AGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCCA-ATTGTCG 33968 || || || || |||||||| ||| ||||||||||||||||||||| | | | || || Sbjct 47771 AGGCGGAGAACAAGATGAAGAGTGGACTCCTTCTGAATGTTGTAATCAGAGAGAGTG-CG 47829 Query 33969 CTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGCACGCTCTC 34028 |||| || | ||||||||||| || |||| ||| ||||| || || | || ||| Sbjct 47830 GCCGTCCTCAAGCTGCTTGCCGGCGAAAATCAAGCGTTGCTGGTCGGGGGGGATGCCCTC 47889 Query 34029 TTTGTCCATAATTTTTTGCTTAATGGAACTCACACTATCAGTAGATTCGCATTCGACCGT 34088 |||||| ||| || ||| | | | | | |||| ||| || |||| || Sbjct 47890 CTTGTCCTGAATCTTGGACTTGACGTTGTCGATAGTGTCAGAAGACTCAACCTCGAGGGT 47949 Query 34089 TATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCAT 34127 || || || ||||| || || || || ||||| ||||| Sbjct 47950 GATGGTCTTGCCGGTCAGGGTCTTGACGAAGATCTGCAT 47988 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397058359269670