Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20fujikuroi_20[genbank_20GCA_5F001023045.1_202015-06-09] 835 sequences; 43,096,072 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq259 111 3e-19 seq506 91.5 3e-13 >seq259 Length=112471 Score = 111 bits (122), Expect = 3e-19 Identities = 159/224 (71%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 243502 ATCATCACAGAAGCAGTTGAAAACGAAAAGGAATTCATTTGCGACGCTATTCCATGCCGG 243561 |||||||| || || || | ||| |||| ||| | || ||| |||| || Sbjct 41299 ATCATCACTGATGCCGTCACCATTGAACAGGAGTTCCTCACTGAGGCTCTTCCCTGTGCC 41240 Query 243562 CTTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATT 243621 ||| | |||||||||||||| |||||| |||||||| || ||||| || || || | Sbjct 41239 CTTCTCGGCATGAACTCTGACCTCATGAAGCAGTACATTGAGTTCGTCGCTGATCGTCTC 41180 Query 243622 TTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAG 243681 | |||| ||||| | ||||| || ||||| ||| |||||||| | ||| ||||| Sbjct 41179 CTTGTCGCTCTTGGCAACGAGAAGGTCTACAAGGCCACCAACCCCTTCGACTTCATGGAA 41120 Query 243682 CTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGT 243725 ||| || ||| || || || ||||||||||| |||||||| Sbjct 41119 AACATCTCCCTTGGCGGCAAGACCAACTTCTTCGAGAAGCGTGT 41076 >seq506 Length=245404 Score = 91.5 bits (100), Expect = 3e-13 Identities = 171/249 (69%), Gaps = 2/249 (1%) Strand=Plus/Plus Query 334107 TCAATGATAGCCATGTTAGAATCGGACCCGTCGAGATCGTGTTCCACGTAAGCAGTTTTC 334166 |||||| | | ||| | || ||| | ||| || ||||| || ||| | |||| || Sbjct 165361 TCAATGGTGGTCATCTCAGTATCAGCGGAGTCAAGGTCGTGCTCGACGAAGACAGTCTTG 165420 Query 334167 AAAACA-TCCGCAGAGGGGAACCCTTCAAGCTGACCGTTCACAATAGCGCGCATCAGAGT 334225 | | || || |||| |||||| ||| ||| |||| || |||||||| ||||| Sbjct 165421 ACCTCGCTCTGCTTAGGGAAACCCT-CAACCTGCTCGTTGTTGATGGCGCGCATGAGAGT 165479 Query 334226 TGATTTACCCGCCCCGTTTGGCCCACACAGACCGTAGCGGTTTCCACGCTTCAGATTGAA 334285 || || || | ||||| || || || ||||| || || | |||||||| ||| || Sbjct 165480 GGACTTTCCGGAACCGTTGGGACCGCAAAGACCATAACGCTGACCACGCTTGAGACGGAG 165539 Query 334286 CCGCGTATTGTTCAGAAGAATTTTTCCACCATATGCCAGAGAAAATTCACAATCACACAG 334345 | || | ||| |||||||| || |||| || || ||||| || ||| | || || Sbjct 165540 ATGAGTCTGGTTGAGAAGAATCTTGGCACCGTAGGCAAGAGAGAAGGTACAGTTGCAAAG 165599 Query 334346 ATCCTCACC 334354 ||||||||| Sbjct 165600 ATCCTCACC 165608 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102868200907250