Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20fujikuroi_20[genbank_20GCA_5F001023045.1_202015-06-09] 835 sequences; 43,096,072 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq705 212 6e-50 >seq705 Length=184299 Score = 212 bits (234), Expect = 6e-50 Identities = 1058/1670 (63%), Gaps = 40/1670 (2%) Strand=Plus/Plus Query 93718 TACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGCAGG 93777 ||| | ||||||| |||||| ||| ||||| || |||||||||||||| || || | | Sbjct 121206 TACCAATACTTTGGCTTCAAGACTTTGGAGCGATCATACCTCCTCAAGATTGACGGTAAG 121265 Query 93778 GTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCACGAC 93837 || |||||| || || || || | ||||| || | | || || || | || Sbjct 121266 ATTGTCGAGCGCCCACAGCACATGATCATGCGTGTGTCTGTTGGTATCTGGGGTGATGAT 121325 Query 93838 ATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAG--AGGTATAC---CATGG 93892 || | || ||| | | | || || || | |||| || | | | |||| Sbjct 121326 ATCGAGCGAGTCTTGGAGACATACA---ACCTGATGT-CAAGCAAGTTCTTCACGCATG- 121380 Query 93893 CCACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGA 93952 | |||| || || ||||| || || ||||| ||| || |||| || || ||| || Sbjct 121381 CTTCCCCCACGCTCTTCAATGCCGGCACCCCTCAGCCCCAATTGTCATCTTGCTTCTTGG 121440 Query 93953 TGACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCA 94012 | | |||| |||| || ||||| | ||| | |||||| |||||| | | Sbjct 121441 TTGATATGAAGGACGACAGTATTGAGGGAATCTACGATACTCTCAAGACCTGTGCCATGA 121500 Query 94013 TCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTA--CGTGCCAGGGGTTC 94070 |||| || || || || || || | | ||| ||| |||| ||||| | || || Sbjct 121501 TCTCCAAGATGGCTGGTGGTATTGGTCTGAATGTGCAC--CGTATCCGTGCTACTGGCTC 121558 Query 94071 CTACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAA 94130 |||||| ||||||||| || || || ||||| |||| |||||||| || |||||||| Sbjct 121559 ATACATCGCCGGTACCAACGGTACATCGAACGGTGTCGTTCCTATGCTTCGTGTCTTCAA 121618 Query 94131 CAACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTA 94190 |||| | || || || || ||||||||||| | | | ||| |||| || |||| Sbjct 121619 CAACACTGCTCGGTATGTCGACCAGGGTGGCAACAAGCGACCCGGTGCTTTTGCCATCTA 121678 Query 94191 TCTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAA 94250 |||||||| |||||| | || || | ||| | || || || ||||||||||| || Sbjct 121679 CCTCGAGCCTTGGCACTCTGATGTCTTCGAGTTCCTTGATCTCCGTAAGAACCACGGTAA 121738 Query 94251 CGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAA 94310 || || | ||| | ||||| ||| || || ||| | || || ||||||||||| Sbjct 121739 GGAGGAGGTCCGTGCCCGTGACCTTTTCCTTGCCCTTTGGATCCCTGATCTTTTTATGAA 121798 Query 94311 ACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTC 94370 || || || || ||| | ||||| ||| | || ||||| || || || || || | Sbjct 121799 GCGTGTTGAAAAGAACGGTGACTGGACACTTATGTGCCCCAACGAGTGCCCTGGCCTCGC 121858 Query 94371 CGACGTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGGC 94430 |||| | ||| | || || | |||| | ||||| | |||||||| Sbjct 121859 CGACTGCTACGGAGAGGAGTTCGAGGCTCTGTACGAAAAGTACGAGAAGGCGGGCAAGGG 121918 Query 94431 CAGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGAC 94490 | ||| || | ||| |||||| ||| | || | || | ||| ||||| Sbjct 121919 TCGCAAGACGATCAAGGCTCAGAAGCTTTGGTACGCCATTCTTGAGGCCCAGACTGAGAC 121978 Query 94491 GGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCT 94550 || | || | ||| | | ||| || | |||| |||| ||||| || |||| Sbjct 121979 CGGAAACCCATTCATGCTCTACAAAGATGCCTGCAACCGCAAGAGTAACCAAAAGAACCT 122038 Query 94551 CGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGA 94610 ||| ||| ||||| ||||| ||||| || ||| ||||||| | | || ||||| Sbjct 122039 CGGTACCATCCGAAGCTCCAATCTTTGCACTGAAATTATCGAGTACTGTGCCCCTGACGA 122098 Query 94611 GATTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAGATGCCTACAC 94670 | | || || || ||||| | ||| | ||| || | ||| | | | |||| Sbjct 122099 GGTCGCCGTCTGCAACCTTGCCTCTCTATCTCTGCCCTCCTTCAT-CAA-----CTAC-- 122150 Query 94671 GTCTACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCGCGGGAAGGATGGTCTT--G 94728 | |||| | ||| | || |||| || | | | ||| || | || Sbjct 122151 -GATGAGGCTTGCTACGACTTCAAGAAGCTGCACAAGGT--CAGTCAGGTTGTTATTCGC 122207 Query 94729 AACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTCAAAC 94788 |||||||||| | | ||||| |||| |||||| |||| |||||| ||| ||| Sbjct 122208 AACCTGAACAAGATCATCGATGTGAACCACTACCCTGTCCAGGAGGCTCGCAACAGTAAC 122267 Query 94789 CTGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGATGATG 94848 || || || ||||| || | || || |||||| | || || || | | || Sbjct 122268 ATGCGCCACCGACCCATTGGTCTTGGTGTTCAGGGTCTTGCCGATGCTTTCCTTGCTCTG 122327 Query 94849 CGTCTGCCCTACGACTCTGTCGACGCGGCGGGTTTGAATTTGAACATATTCGAAAGCATT 94908 || |||||| ||| || ||| || | | ||| | | || || || | |||| Sbjct 122328 CGCATGCCCTTCGAGTCCCCCGAGGCTCGTGAGCTCAATAAGCAGATTTTTGAGACCATT 122387 Query 94909 TATTACGGGGCCATGAAACAATCCGTCCACTTGGCCAGATCGGACGGCGGGCCACACGAA 94968 ||| ||| || ||| ||||| || |||| | ||| | || || || Sbjct 122388 TATCACGCTGCGCTGACTGCCTCCGTGCAGCTGGCTA---AGGAAGAGGGTCCCTACTCC 122444 Query 94969 TCGTTCCGCGGATCGCCCTTGGAACAGGGCATTTTTCAGTTCGACCTCTGGGGTGTGAAG 95028 | ||| || || ||| |||| ||| | ||||||||| | ||| || ||| Sbjct 122445 ACCTTCAAGGGTTCCCCCGCCTCTGAGGGTATTCTCCAGTTCGACATGTGGAACGTCAAG 122504 Query 95029 CCCTCGGGTCTGTACGACTGGGAAGCTCTACGCGCTGATGTTATCAAACACGGTGTGAAA 95088 ||||| | || | |||||||| |||| || | || || | | |||||| | Sbjct 122505 CCCTCTGACCTCTGGGACTGGGAGACTCTTCGAGAGGAAGTCAAGACACACGGCATCCGC 122564 Query 95089 AACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAACAAC 95148 ||| || || | || || ||||| || ||| || | ||||| || ||||||||| Sbjct 122565 AACAGTCTACTCCTTGCTCCTATGCCTACTGCCAGTACCTCCCAGATTCTGGGCAACAAC 122624 Query 95149 GAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGAATTC 95208 |||| ||||| |||| ||||||||| | ||| | | || || ||||| || || || Sbjct 122625 GAGTGCTTCGAGCCCTACACCTCCAATATCTACCAACGCCGTGTTCTCGCTGGTGAGTTT 122684 Query 95209 CCCGTCATCAACAAGCACCTCCTACGGGACC-TGACGTCTCTGGGTGTGTGGGGTGACAA 95267 | || | ||| || || ||||| || || | ||||| ||||| || Sbjct 122685 CAGGTTGTTAACCCCTGGCTGCTCAAGGACCTTGTCGAC-ATGGGTCTGTGGTCCGATGC 122743 Query 95268 GGTCAAGAACC----AACTGCTACGCGCCAACGGCTCCGTCCAGAACATCCCGCAAATAC 95323 | ||||||| | |||| | || || ||| | |||||||| || | || | Sbjct 122744 TATGAAGAACCGCATCATTGCT----GAGAATGGATCCATTCAGAACATTCCCAACATCC 122799 Query 95324 CGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAGCGC 95373 | | || ||||||| || || ||||| || ||||||||| | |||||| Sbjct 122800 CTGCCGATGTCAAGGCTCTGTATAAGACTGTTTGGGAGATCTCTCAGCGC 122849 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494718036326600