Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20fujikuroi_20[genbank_20GCA_5F001023045.1_202015-06-09] 835 sequences; 43,096,072 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq443 87.8 2e-12 seq68 86.0 6e-12 >seq443 Length=545840 Score = 87.8 bits (96), Expect = 2e-12 Identities = 160/232 (69%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || || ||||| | | || || || || || || ||||| ||||| || || ||| Sbjct 425322 ATACCACCACGGAGGCGGAGGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCG 425381 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 || | ||| ||| || | || || || || | |||| || |||||||| || Sbjct 425382 CTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCAGGG 425441 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289 || ||||| || || || || || || |||| || | || | ||||||||||||||| Sbjct 425442 GGGATGCCCTCCTTGTCCTGGATCTTGGACTTGA-CGTTGTCGATGGTGTCGGAAGACTC 425500 Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341 || || || || | ||| || || || || || || || ||||| |||||| Sbjct 425501 CACCTCAAGGGTGATCGTCTTCCCCGTGAGGGTCTTGACGAAAATCTGCATC 425552 >seq68 Length=53621 Score = 86.0 bits (94), Expect = 6e-12 Identities = 159/231 (69%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || || ||||| | | || ||||| || || || ||||| || || || ||||| Sbjct 47759 ATACCACCACGGAGGCGGAGAACAAGATGAAGAGTGGACTCCTTCTGAATGTTGTAATCA 47818 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 || || || || | || || || ||| | ||||| ||||||||||| || Sbjct 47819 GAGAGAGTGCGGCCGTCCTCAAGCTGCTTGCCGGCGAAAATCAAGCGTTGCTGGTCGGGG 47878 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289 || ||||| || || || ||||| || |||| || | || | ||||| |||||||| Sbjct 47879 GGGATGCCCTCCTTGTCCTGAATCTTGGACTTGA-CGTTGTCGATAGTGTCAGAAGACTC 47937 Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || ||||| || | || |||||||| || || || || || || ||||| Sbjct 47938 AACCTCGAGGGTGATGGTCTTGCCGGTCAGGGTCTTGACGAAGATCTGCAT 47988 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451998482216600