Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20fujikuroi_20[genbank_20GCA_5F001023045.1_202015-06-09] 835 sequences; 43,096,072 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq274 224 1e-53 seq111 86.0 8e-12 >seq274 Length=58898 Score = 224 bits (248), Expect = 1e-53 Identities = 428/629 (68%), Gaps = 6/629 (1%) Strand=Plus/Plus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 || || || |||||||||||||| || || || || || | ||||| || |||||||| Sbjct 49766 TCAAAGTCCTCACCACCCAAGTGAGTGTCACCGGCAGTAGACTTGACCTCGAAGATACCC 49825 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 | |||||| | | | || ||||| || ||||||||||| || || || || || ||| Sbjct 49826 TCCTCAATGGTAAGGAGAGACACATCGAAGGTACCACCACCAAGATCGAAGATCAGGACG 49885 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 || ||| | || ||||| || |||||||| || || || || || || || || Sbjct 49886 TTGCGCTCGCCCTCAACCTTCTTGTCAAGACCGTAGGCAATGGCGGCAGCAGTAGGCTCG 49945 Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696 || ||||| || ||| ||| || || || || | ||||| || || ||||| || Sbjct 49946 TTGATAATTCGGAGAACGTTGAGACCGGCGATGAGACCAGCATCCTTGGTGGCTTGACGC 50005 Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGA 7756 || |||||||| |||||||| ||||| || || || |||| |||| ||| ||||| Sbjct 50006 TGAGAATCGTTGAAGTAGGCAGGGACAGTAACAACGGCGTTGTTGACAGTCTCGCCGAGG 50065 Query 7757 TACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCA 7816 || || || ||| | || ||| ||||| || | ||| | || ||||| || | | Sbjct 50066 TAAGACTCAGCGGTCTCACGCATCTTGGTGAGGATCATAGCAGAGATCTCCTCGGGGGTG 50125 Query 7817 AACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGG 7876 || || || || || || || || || || || |||| ||| || | | | Sbjct 50126 AAAGTCTTGGTCTCGCCCTTGAACTCGACCTCGATGTTGGGCTTA---CCACCCTTGTCG 50182 Query 7877 ATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTT 7936 | | ||| | | | | ||||||||| | || |||| |||| | ||||| | Sbjct 50183 ACGATCTTGAAGGGGAAGTGCTTCATATCGGCCTGAACCTCAGGGTCGGCGAACTTGCGA 50242 Query 7937 CCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTC 7996 ||||| | ||||| || || || || ||||| | ||||||||| || ||||||||| Sbjct 50243 CCGATCAATCGCTTGGCGTCGAAGACAGTGTTCTGGGGGTTCATAGCGACTTGGTTCTTG 50302 Query 7997 GCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTT 8056 || || || || || ||||| || | || || || ||||| | || ||||| ||| Sbjct 50303 GCGGCATCACCAATCAGACGCTC---GGTGTCGGTGAAACCGACGAATGAGGGGGTAGTT 50359 Query 8057 CGATTCCCTTGGTCGTTCGCAATAATTTC 8085 || || || |||||||| || || || || Sbjct 50360 CGGTTACCCTGGTCGTTGGCGATGATATC 50388 Score = 150 bits (166), Expect = 2e-31 Identities = 552/863 (64%), Gaps = 21/863 (2%) Strand=Plus/Plus Query 6536 CCATTCTTCGCCTCGACCTTTTTCGCGTACTTTTCATCTTCATCTTTATACTTTTCCGCA 6595 ||||| |||||| | || |||| | | || || || || || ||||| || || Sbjct 47243 CCATTTTTCGCCGCAACTCTTTTACCCTCAGCCTCGTCCTCCTCCTTGTACTTCTCAGCG 47302 Query 6596 TCTTGGACCATCTTTTCAATGTCTTCTTTCGATAATCTCCCCTTATCATTCGTAATCGTA 6655 || | || ||| ||||| || || || || | | ||||| ||||| ||||| | Sbjct 47303 TCATTGAGCATACGCTCAATCTCCTCCTTGGACAGGCGGCCCTTGTCATTAGTAATGACA 47362 Query 6656 ATCTTTTCGGATTTACCCGAGGCCTTATCTTCAGCACTTACATTCAAAATACCATTTGCA 6715 ||||| | ||| || || | |||| || | ||| ||||||| ||||| || ||| Sbjct 47363 ATCTTGTTGGACTTGCCGGTACCCTTCTCGACGGCAGAGACATTCATGATACCGTTGGCA 47422 Query 6716 TCAACATCGAACCTTACATTAATTTGTGGTGTACCCCTCGGTGCGGCTGGAATACCCGTT 6775 |||| ||||| | || | || || || ||| | || || | || ||||| || Sbjct 47423 TCAAGGTCGAAGGTGACCTCGATCTGAGGAACACCGCGGGGAGCAGGGGGGATACCAGTG 47482 Query 6776 AAATCAAATGTACCAAGTAAACTGTTATCCGTCGCCTTCTTACGTTCACCTTCATAGACT 6835 | || || | || | | |||| ||| | | || ||| ||||| || ||||| Sbjct 47483 AGCTCGAACTTGCCCATGAGGTTGTTGTCCTTGGTGCGCTGACGCTCACCCTCGTAGACC 47542 Query 6836 TTAATTGTCACCGCAGGTTGATTATCTTGTGCCGTTGAGAAGATTTGTTCTTTCTTAGAT 6895 | || || |||| || || || || ||||||| | ||||| | Sbjct 47543 TGGATAAGAACACCAGGCTGGTTGTCGGAGAAGGTGGAGAAGACCTCGGACTTCTTGGTA 47602 Query 6896 GGAATCGTCGTATTTCTCGGAATAACCGGGGTCATAATACCACCCATAGTTTCGAGTCCA 6955 || || || || || | || |||| | |||||| |||||||| ||| |||| || Sbjct 47603 GGGATGGTGGTGTTGCGGGGGATAAGCTTGGTCATCATACCACCAGCAGTCTCGATACCG 47662 Query 6956 AGAGACAGAGGTGTCACGTCCAAGAGTAACAGG-TCTTGAACAGATTCGTTCCCTT---- 7010 ||||| || || | || || |||| | |||| ||| | || || |||| Sbjct 47663 AGAGAGAGGGGGGCAACATC-AAGA--AGCAGGATCTCG------TTGGTGGCCTTGCTG 47713 Query 7011 -------CACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCG 7063 |||| | | || ||||| ||||| | || ||||| || || ||||||||| Sbjct 47714 GAGGTGTCACCAGAGAGAATCGCGGCCTGGACAGCGGCACCGTAGGCAACAGCCTCATCG 47773 Query 7064 GGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATT 7123 ||||| || | || || |||| || ||||| || || || | | | | |||| Sbjct 47774 GGGTTGATGGACTTGTTGGGTTCCTTTCCGTTGAAGTAGTCGGTGATGAGCTTCTGAACA 47833 Query 7124 TTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATC 7183 ||||| || || ||||||||||| | || || || | || || || |||||| Sbjct 47834 CGGGGGATGCGGGTAGATCCACCGACAAGGACAATCTCGTGGACGAGGGACTTGTCGATC 47893 Query 7184 TTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACAC 7243 || | ||| ||| ||||| || | ||| ||||| | ||| || Sbjct 47894 TTGGCGTCGGTAAGGACACGGTCGACGGGCTGGATAGTGGATCGGAAAAGATCCTGGCAG 47953 Query 7244 AGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAA 7303 || ||||| ||||| |||||||| ||||| || ||||| |||| || ||| | | || Sbjct 47954 AGCTCCTCGAAACGAGCACGGGTGATGGAGGTGTAGAAGTCAATACCCTCGAAGAGAGAG 48013 Query 7304 TCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCC 7363 ||||| || |||| || || || | ||||| | |||||||| || |||||||| || Sbjct 48014 TCAATCTCGATGGAGGTCTGAGCGGAAGAAGAAAGGGTTCGCTTGGCACGCTCACAAGCA 48073 Query 7364 GTTCGTAAACGACGAAGGGCACG 7386 ||||| | ||| || || || || Sbjct 48074 GTTCGGAGACGTCGCAGAGCGCG 48096 >seq111 Length=125799 Score = 86.0 bits (94), Expect = 8e-12 Identities = 166/243 (68%), Gaps = 3/243 (1%) Strand=Plus/Plus Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515 ||||||||| |||||||| | || || || || ||||| || ||| || ||||| || Sbjct 60788 ATCGAAATCCTCACCACCGAGATGGGTGTCACCAGCGGTAGCCAGGACCTCGAAGATGCC 60847 Query 7516 TCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTAC 7575 | ||||| | | || ||||| || ||||||||||| || || | | || | Sbjct 60848 GTCATCAATAGAGAGAAGGGAGACATCGAAGGTACCACCACCGAGATCGTAGACGATGA- 60906 Query 7576 GTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTC 7635 || || | || | | | |||| || |||||||| |||||||| || || || || || Sbjct 60907 -TTTGTCGC-TCACCATCGGTCTTGTCAAGACCGTAGGCGATAGCGGCGGCGGTGGGCTC 60964 Query 7636 ATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCG 7695 || | || || ||| ||| || || ||||| | | ||||| || || || ||||| Sbjct 60965 GTTGACGATTCGGAGAACGTTGAGACCGGCAATGATACCGGCATCCTTGGTGGCCTGTCG 61024 Query 7696 TTG 7698 || Sbjct 61025 CTG 61027 Score = 86.0 bits (94), Expect = 8e-12 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 7704 CGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATT 7763 |||| |||||||| ||||| || ||||| |||| ||||| ||||||||||| || | Sbjct 61083 CGTTGAAGTAGGCGGGGACGGTAACGACGGCGTGGGTGACCTTCTTACCGAGGTAGCCCT 61142 Query 7764 CCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGTT 7823 | |||| || ||||| ||| ||||||||| | || ||||| |||| | ||||| | Sbjct 61143 CAGCGACCTCCTTCATCTTGCCAAGAACCATAGCAGAGATCTCCTCAGGAGTGAACTGCT 61202 Query 7824 TC 7825 || Sbjct 61203 TC 61204 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635126170801400