Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20fujikuroi_20[genbank_20GCA_5F001023045.1_202015-06-09] 835 sequences; 43,096,072 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq705 203 4e-47 seq259 141 1e-28 seq754 82.4 9e-11 >seq705 Length=184299 Score = 203 bits (224), Expect = 4e-47 Identities = 1127/1786 (63%), Gaps = 47/1786 (3%) Strand=Plus/Plus Query 111611 CCCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGT 111670 ||||||| ||||| ||||||| || | | |||||| || || ||||| || || Sbjct 121277 CCCACAGCACATGATCATGCGTGTGTCTGTTGGTATCTGGGGTGATGATATCGAGCGAGT 121336 Query 111671 TTTGGAGACATACGACAAGATGTCCCGTGGTATGTTCATCCACGCAACACCAACCCTCTT 111730 |||||||||||| || |||||| | | |||| || || | || || ||||| Sbjct 121337 CTTGGAGACATACAACCTGATGTCAAGCAAGTTCTTCACGCATGCTTCCCCCACGCTCTT 121396 Query 111731 CAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGA 111790 ||| || || || || |||||| |||| ||| ||| | ||| | ||||| || Sbjct 121397 CAATGCCGGCACCCCTCAGCCCCAATTGTCATCTTGCTTCTTGGTTGATATGAAGGACGA 121456 Query 111791 TTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGG 111850 || | || || |||| ||||||| |||||| ||||| ||| |||||| Sbjct 121457 CAGTATTGAGGGAATCTACGATACTCTCAAGACCTGTGCCATGATCTCCAAGATGGCTGG 121516 Query 111851 TGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTAT-TAGA-GGTACA 111908 |||||| || || | | || | || | || | | ||| || | | ||||| Sbjct 121517 TGGTATTGGTCTGAATGTGCACCGTATCCGTGCTACT--GGCTCATACATCGCCGGTACC 121574 Query 111909 AATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTAT 111968 || ||| ||| | ||| | |||| |||||||| || || ||| ||| || || ||| Sbjct 121575 AACGGTACATCGAACGGTGTCGTTCCTATGCTTCGTGTCTTCAACAACACTGCTCGGTAT 121634 Query 111969 GTAAACCAAGCTGG------GCGTCGCAAGGGATCTATCGCAGTCTATCTTGAGCCATGG 112022 || |||| | ||| ||| | | || || | || |||| || ||||| ||| Sbjct 121635 GTCGACCAGGGTGGCAACAAGCGACCC---GGTGCTTTTGCCATCTACCTCGAGCCTTGG 121691 Query 112023 CACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGG 112082 ||| | ||| || | ||||||||||| | ||| ||||| ||| | ||||||| || Sbjct 121692 CACTCTGATGTCTTCGAGTTCCTTGATCTCCGTAAGAACCACGGTAAGGAGGAGGTCCGT 121751 Query 112083 TGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAG 112142 ||| || || ||| || || ||||| || ||||| || |||||| | ||||| || Sbjct 121752 GCCCGTGACCTTTTCCTTGCCCTTTGGATCCCTGATCTTTTTATGAAGCGTGTTGAAAAG 121811 Query 112143 AGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGGGT 112202 | || | ||| | || | || || || || || || ||| |||| | || Sbjct 121812 AACGGTGACTGGACACTTATGTGCCCCAACGAGTGCCCTGGCCTCGCCGACTGCTACGGA 121871 Query 112203 GAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTG-----CGA 112257 |||||||| || || || ||| |||||||||| ||| ||||| | | || Sbjct 121872 GAGGAGTTCGAGGCTCTGTACGAAAAGTACGAG-----AAGGCGGGCAAGGGTCGCAAGA 121926 Query 112258 CGGTGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACA 112316 || | | || | || | | ||| | || ||||| || | || || ||||| || | Sbjct 121927 CGAT-CAAGGCTCAGAAGCTTTGGTACGCCATTCTTGAGGCCCAGACTGAGACCGGAAAC 121985 Query 112317 CCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTG 112376 |||| ||||| |||||||| ||||| |||| |||||||| |||||||| | ||| Sbjct 121986 CCATTCATGCTCTACAAAGATGCCTGCAACCGCAAGAGTAACCAAAAGAACCTCGGTACC 122045 Query 112377 ATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCT 112436 ||| || ||||| || || || ||||| | || | | | || ||| || Sbjct 122046 ATCCGAAGCTCCAATCTTTGCACTGAAATTATCGAGTACTGTGCCCCTGACGAGGTCGCC 122105 Query 112437 GTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTT 112496 || || ||||| || || | |||| ||| | | || || | || || Sbjct 122106 GTCTGCAACCTTGCCTCTCTATCTCTGCCCTCCTTCAT-----CAACTACGATGAGGCTT 122160 Query 112497 -----GATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAG 112551 || | | || || ||| | || | | ||| | ||||| |||| Sbjct 122161 GCTACGACTTCAAGAAGCTGCACAAGGTCAGTCAGGTTGTTATTCGCAACCTGAACAAGA 122220 Query 112552 TTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTC 112611 | || ||| || ||||| || || ||||| || ||| ||| | ||||| | Sbjct 122221 TCATCGATGTGAACCACTACCCTGTCCAGGAGGCTCGCAACAGTAACATGCGCCACCGAC 122280 Query 112612 CAATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCATT-CTTTGTCGCCACGCATTT 112670 | |||||||| ||||| || ||||| || |||| ||| || || || ||| | || Sbjct 122281 CCATTGGTCTTGGTGTTCAGGGTCTTGCCGATGCTTTCCTTGCTCTG-CGCATGCCCTTC 122339 Query 112671 GATTCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCT 112730 || ||| ||| || || ||||| || || |||||||| || |||||||| || Sbjct 122340 GAGTCCCCCGAGGCTCGTGAGCTCAATAAGCAGATTTTTGAGACCATTTATCACGCTGCG 122399 Query 112731 CTTGAGGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCT 112790 || || | || |||| ||| || ||||| || ||||| ||||||| Sbjct 122400 CTGACTGCCTCCGTGCAGCTGGCTAAGGAAGAGGGTCCCTACTCCACCTTCAAGGGTTCC 122459 Query 112791 CCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTTCACTAC 112850 || || || | || | || || || || |||||| | | || || | || Sbjct 122460 CCCGCCTCTGAGGGTATTCTCCAGTTCGACATGTGGAACGTCAAGCCCTCTGACCTCTGG 122519 Query 112851 GACTGGGACGCTC-TCAAG-GAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGA 112908 |||||||| ||| || || | | | ||||| | || | || |||||||| | Sbjct 122520 GACTGGGAGACTCTTCGAGAGGAAG--TCAAGACACACGGCATCCGCAACAGTCTACTCC 122577 Query 112909 TGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAAC 112968 | || || ||||| || ||| ||| | || || |||| || || || ||||| || | Sbjct 122578 TTGCTCCTATGCCTACTGCCAGTACCTCCCAGATTCTGGGCAACAACGAGTGCTTCGAGC 122637 Query 112969 CCTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAACA 113028 ||||||| | || ||||| | | | ||||| || |||||| | |||| ||| Sbjct 122638 CCTACACCTCCAATATCTACCAACGCCGTGTTCTCGCTGGTGAGTTTCAGGTTGTTAACC 122697 Query 113029 AGCATCTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTCA 113088 || | | ||||| || || ||||| |||||| | | ||||||| | | || Sbjct 122698 CCTGGCTGCTCAAGGACCTTGTCGACATGGGTCTGTGGTCCGATGCTATGAAGAACCGCA 122757 Query 113089 TGGTGAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAGATGAAATTAAGAAGT 113148 | | | | ||| |||||||| || ||| | || || | || | ||| Sbjct 122758 TCATTGCTGAGAATGGATCCATTCAGAACATTCCCAACATCCCTGCCGATGTCAAGGCTC 122817 Query 113149 TGTACCGCACAGTTTGGGAAATCAAGATGAAGGATGTCATTGACATGGCCGCAGATCGTG 113208 |||| || |||||||| ||| | | ||| | | ||||| || ||||| | Sbjct 122818 TGTATAAGACTGTTTGGGAGATCTCTCAGCGCCAGGTCGTCCAGATGGCTGCTGATCGAG 122877 Query 113209 GTCGCTTCATTGATCAAAGTCAAAGT--ATGAATCTATTCATGGAAAGTCCAACGATGTC 113266 || ||||||||||| |||| ||| |||| | |||| | || |||||| Sbjct 122878 GTGCCTTCATTGATC--AGTCCCAGTCACTGAACATCCACATGAAGGACCCCACGATGGG 122935 Query 113267 CAAGCTCTCTTCTATGCACATGTACA-GTTGGAAGAAGGGTCTCAAAACGGGGATGTATT 113325 |||| || | |||||| | | || | |||||| || ||||| || || ||||| | Sbjct 122936 CAAGATCACCAGCATGCAC-TTTGCAGGCTGGAAGCTTGGCCTCAAGACTGGCATGTACT 122994 Query 113326 ACCTCCGATCTAAGGCAAAGGCGCGCCCAATTCAGTTCAGTCTTGA 113371 |||| || | |||| || || |||||||||| | |||| Sbjct 122995 ACCTTCGTACACAGGCTGCTGCTGCTCCTATTCAGTTCACTGTTGA 123040 >seq259 Length=112471 Score = 141 bits (156), Expect = 1e-28 Identities = 206/286 (72%), Gaps = 4/286 (1%) Strand=Plus/Minus Query 102048 CTCATAGACAAGTATATTAAGGATGGTGCTGAGAAGAAGCAGCTCTTTGAA-GCCATCCA 102106 ||||| |||| ||||| ||||| || || ||| | | ||| || ||||| | Sbjct 41638 CTCATCGACACCTATATCAAGGAGCCCGCCCAGC-GAACCTACCTTTTCAACGCCATTGA 41580 Query 102107 AACAGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT-ACAAAGT 102165 || |||| || || | |||||| || || ||||| || ||| | | | || | Sbjct 41579 GACCATTCCCTGCATCCGAAAGAAGGCTGACTGGGCCATCCGATGGATCCAAGATAAGGA 41520 Query 102166 CGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTG 102225 | | ||||||||| | || ||| | || || || |||||||||||||||||| || Sbjct 41519 CTC-TTCCTTTGCCCAACGCCTCGTTGCTTTCGCTGCCGTTGAGGGTATCTTCTTCAGTG 41461 Query 102226 GTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCT 102285 || ||||| | | |||| |||||||||||||| ||||||||||| ||||| ||||| Sbjct 41460 GTGCCTTCGCCTCCATTTTCTGGCTCAAGAAGCGTGGTCTCATGCCTGGTCTGACCTTCT 41401 Query 102286 CCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 102331 | |||||||| ||||||||||||||||| || ||| || ||||| Sbjct 41400 CTAACGAGCTCATCTCTCGTGACGAGGGTCTTCACACTGACTTTGC 41355 >seq754 Length=449793 Score = 82.4 bits (90), Expect = 9e-11 Identities = 120/170 (71%), Gaps = 0/170 (0%) Strand=Plus/Plus Query 163548 ATGGGCGTGTTGCGCCACGATCTGGTCTCGCTGTGAAACACGGTATCCAAGTTGGTGCGG 163607 |||| || |||| || ||||| ||||||||| || || || | || || | Sbjct 368401 ATGGACGCATTGCCCCTCGATCGGGTCTCGCTTCCAAGCATTTCATTGACACAGGCGCTG 368460 Query 163608 GTGTTATTGATCCCGACTACACGGGTGAAGTCAAAGTCGTTCTCTTCAATCATGGAGACA 163667 |||| || ||| |||| ||| ||| | ||||| ||| | |||||||| ||| || Sbjct 368461 GTGTCATCGATGCCGATTACCGCGGTCAGGTCAAGGTCCTGCTCTTCAACCATAACGAAT 368520 Query 163668 AAGACTTTGAGGTAAAGAGGGGGGAGCGCATCGCACAACTTGTTCTTGAG 163717 ||||||||||| ||| ||| || ||||| || ||||||||||| ||| Sbjct 368521 CCGACTTTGAGGTGAAGGAGGGCGACCGCATTGCTCAACTTGTTCTGGAG 368570 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620735921001200