Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20fujikuroi_20[genbank_20GCA_5F001023045.1_202015-06-09]
835 sequences; 43,096,072 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq705 187 3e-42
seq259 104 3e-17
seq754 87.8 2e-12
>seq705
Length=184299
Score = 187 bits (206), Expect = 3e-42
Identities = 538/812 (66%), Gaps = 27/812 (3%)
Strand=Plus/Minus
Query 106507 GTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTT 106566
|||||| | |||||| || || | ||||| || || || || | |||||||||||
Sbjct 122084 GTACTCGATAATTTCAGTGCAAAGATTGGAGCTTCGGATGGTACCGAGGTTCTTTTGGTT 122025
Query 106567 ACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGA 106626
|||||| |||||| ||||| |||||||||||| | || | || ||||| ||||| |
Sbjct 122024 ACTCTTGCGGTTGCAGGCATCTTTGTAGAGCATGAATGGGTTTCCGGTCTCAGTCTGGGC 121965
Query 106627 CTTGAGAATTGCCTTCCACA-CATCGGCGGCTGGTACAATGGCGTTG-GCCCGT--CCCT 106682
|| ||||| || | ||| | | || | | || | || | ||| | || | |||
Sbjct 121964 CTCAAGAATGGCGTACCAAAGCTTCTGAGCCTTG----ATCGTCTTGCGACCCTTGCCCG 121909
Query 106683 CCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTG 106742
|| |||||||||| ||| || || || |||||||| || ||||| ||| || |
Sbjct 121908 CCTTCTCGTACTTTTCGTACAGAGCCTCGAACTCCTCTCCGTAGCAGTCGGCGAGGCCAG 121849
Query 106743 GTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAA 106802
| || || || || | ||| | ||| | ||| || ||||| |||||||| ||||
Sbjct 121848 GGCACTCGTTGGGGCACATAAGTGTCCAGTCACCGTTCTTTTCAACACGCTTCATAAAAA 121789
Query 106803 GGTCTGGAATCCACAGGG-ATGAAAAGAGATCTC-TACACCGAGCCTCTTCGTCACCTTG 106860
| || || ||||| |||| | | ||| || || | ||| || |||| || | ||| ||
Sbjct 121788 GATCAGGGATCCAAAGGGCAAGGAAA-AGGTCACGGGCACGGA-CCTCCTCCTTACCGTG 121731
Query 106861 GTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGC 106920
||| || | ||||||||||| | || ||| | |||||| ||||| || |||| ||
Sbjct 121730 GTTCTTACGGAGATCAAGGAACTCGAAGACATCAGAGTGCCAAGGCTCGAGGTAGATGGC 121671
Query 106921 GATAGATCCCTTTCG---ACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATAC 106977
| || || ||| ||| | || | ||||| || || ||| ||| || ||
Sbjct 121670 AAAAGCACCGGGTCGCTTGTTGCCACCCTGGTCGACATACCGAGCAGTGTTGTTGAAGAC 121611
Query 106978 GCGAAGCATTGGAATAATACCATCTGATTGACCATTTGT-CCCCCGA-ATACGAGATTTA 107035
|||||||| |||| | ||| | ||| ||| || || || ||| || ||| |
Sbjct 121610 ACGAAGCATAGGAACGACACCGTTCGATGTACCGTTGGTACCGGCGATGTATGAG--CCA 121553
Query 107036 TTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCA 107095
| || | | | || | | || |||||||| |||||| ||| ||||| |||
Sbjct 121552 GTAGCACGGATACGGTGCACATTCAGACCAATACCACCAGCCATCTTGGAGATCATGGCA 121493
Query 107096 CACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAG 107155
|| | | ||||| | ||||| || | || ||| ||||| | | | | ||||
Sbjct 121492 CAGGTCTTGAGAGTATCGTAGATTCCCTCAATACTGTCGTCCTTCATATCAACCAAGAAG 121433
Query 107156 CAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTG----TTGCGTG 107211
||| |||| || || || || || ||||||||||| || || | ||||||
Sbjct 121432 CAAGATGACAATTGGGGCTGAGGGGTGCCGGCATTGAAGAGCGTGGGGGAAGCATGCGTG 121373
Query 107212 AATGAACATACCTTGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCC 107271
|| |||| | | | |||||| || ||||||||||||||| || || || || ||
Sbjct 121372 AA-GAACTTGCTT---GACATCAGGTTGTATGTCTCCAAGACTCGCTCGATATCATCACC 121317
Query 107272 GTGGATGCCGATGGCCACACGCATAAACATGT 107303
||| || | | ||||||||| | |||||
Sbjct 121316 CCAGATACCAACAGACACACGCATGATCATGT 121285
>seq259
Length=112471
Score = 104 bits (114), Expect = 3e-17
Identities = 299/457 (65%), Gaps = 16/457 (4%)
Strand=Plus/Plus
Query 116986 TAGTCCCCAACTCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 117045
||||| |||| |||||||| |||||||||||||| || ||||| |||||||||||
Sbjct 41067 TAGTCGGCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCAAGGGAGATGTTTTCCATG 41126
Query 117046 AAGTCAAATGGATTCTTCGCGTTCCAAA-----TGGGTGGCACCCCAACTTGTTTGAGGA 117100
||||| || || || | || || | | | | || |||| ||||
Sbjct 41127 AAGTCGAAGGGGTTGGTGGCCTTGTAGACCTTCTCGTTG-----CCAAGAGCGACAAGGA 41181
Query 117101 GACGATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGAT 117160
||||||| | || |||||||||||| ||| ||||||||||| |||| ||
Sbjct 41182 GACGATCAGCGACGAACTCAATGTACTGCTTCATGAGGTCAGAGTTCATGCCGAGAAGGG 41241
Query 117161 TACATGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATGG 117220
||| || || || || || |||| | | ||||| || || || | | |||
Sbjct 41242 CACAGGGAAGAGCCTCAGTGAGGAACTCCTGTTCAATGGTGACGGCATCAGTGATGATAT 41301
Query 117221 CGTGGATAGTTTCGGTAGTGG---GTCTATTACGCAAAGTCTTGAAGAGCTCCACGGCAA 117277
| || || | | | ||| | | || | || | || ||| || |||||
Sbjct 41302 CTTGAATCATCTGCTTGCTGGCACGGCCCTTTAGGTGAGAGTGGAGGAGG--CA-GGCAA 41358
Query 117278 ACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCA 117337
| || ||| |||||||| || || || || || || || |||||| || || ||||
Sbjct 41359 AGTCAGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTAGAGAAGGTCAGACCAGGCA 41418
Query 117338 TGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCT 117397
||||||| |||||||| | ||| |||| | | ||| | || ||||||||||||||
Sbjct 41419 TGAGACCACGCTTCTTGAGCCAGAAAATGGAGGCGAAGGCACCACTGAAGAAGATACCCT 41478
Query 117398 CCACACACGCAAACGCAAAAAGGCGCTCGGCGAAGGA 117434
| || || || |||| ||||| | ||| |||||
Sbjct 41479 CAACGGCAGCGAAAGCAACGAGGCGTTGGGCAAAGGA 41515
>seq754
Length=449793
Score = 87.8 bits (96), Expect = 2e-12
Identities = 123/173 (71%), Gaps = 0/173 (0%)
Strand=Plus/Plus
Query 155045 ATGGTCGTGTTGCACCACGATCCGGTCTCGCTGTGAAGCATGGTATTCAAGTTGGTGCGG 155104
|||| || |||| || ||||| ||||||||| |||||| ||| | || || |
Sbjct 368401 ATGGACGCATTGCCCCTCGATCGGGTCTCGCTTCCAAGCATTTCATTGACACAGGCGCTG 368460
Query 155105 GTGTTATTGATCCCGACTATACAGGTGAAGTCAAAGTCGTTCTCTTCAATCACGGAGACA 155164
|||| || ||| |||| || ||| | ||||| ||| | |||||||| || ||
Sbjct 368461 GTGTCATCGATGCCGATTACCGCGGTCAGGTCAAGGTCCTGCTCTTCAACCATAACGAAT 368520
Query 155165 AAGACTTTGAGGTAAAGAAAGGGGATCGCATCGCACAACTTGTCCTTGAGCGC 155217
||||||||||| ||| | || || ||||| || |||||||| || ||||||
Sbjct 368521 CCGACTTTGAGGTGAAGGAGGGCGACCGCATTGCTCAACTTGTTCTGGAGCGC 368573
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589974642075400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |