Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20fujikuroi_20[genbank_20GCA_5F001023045.1_202015-06-09] 835 sequences; 43,096,072 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq705 187 3e-42 seq259 104 3e-17 seq754 87.8 2e-12 >seq705 Length=184299 Score = 187 bits (206), Expect = 3e-42 Identities = 538/812 (66%), Gaps = 27/812 (3%) Strand=Plus/Minus Query 106507 GTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTT 106566 |||||| | |||||| || || | ||||| || || || || | ||||||||||| Sbjct 122084 GTACTCGATAATTTCAGTGCAAAGATTGGAGCTTCGGATGGTACCGAGGTTCTTTTGGTT 122025 Query 106567 ACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGA 106626 |||||| |||||| ||||| |||||||||||| | || | || ||||| ||||| | Sbjct 122024 ACTCTTGCGGTTGCAGGCATCTTTGTAGAGCATGAATGGGTTTCCGGTCTCAGTCTGGGC 121965 Query 106627 CTTGAGAATTGCCTTCCACA-CATCGGCGGCTGGTACAATGGCGTTG-GCCCGT--CCCT 106682 || ||||| || | ||| | | || | | || | || | ||| | || | ||| Sbjct 121964 CTCAAGAATGGCGTACCAAAGCTTCTGAGCCTTG----ATCGTCTTGCGACCCTTGCCCG 121909 Query 106683 CCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTG 106742 || |||||||||| ||| || || || |||||||| || ||||| ||| || | Sbjct 121908 CCTTCTCGTACTTTTCGTACAGAGCCTCGAACTCCTCTCCGTAGCAGTCGGCGAGGCCAG 121849 Query 106743 GTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAA 106802 | || || || || | ||| | ||| | ||| || ||||| |||||||| |||| Sbjct 121848 GGCACTCGTTGGGGCACATAAGTGTCCAGTCACCGTTCTTTTCAACACGCTTCATAAAAA 121789 Query 106803 GGTCTGGAATCCACAGGG-ATGAAAAGAGATCTC-TACACCGAGCCTCTTCGTCACCTTG 106860 | || || ||||| |||| | | ||| || || | ||| || |||| || | ||| || Sbjct 121788 GATCAGGGATCCAAAGGGCAAGGAAA-AGGTCACGGGCACGGA-CCTCCTCCTTACCGTG 121731 Query 106861 GTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGC 106920 ||| || | ||||||||||| | || ||| | |||||| ||||| || |||| || Sbjct 121730 GTTCTTACGGAGATCAAGGAACTCGAAGACATCAGAGTGCCAAGGCTCGAGGTAGATGGC 121671 Query 106921 GATAGATCCCTTTCG---ACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATAC 106977 | || || ||| ||| | || | ||||| || || ||| ||| || || Sbjct 121670 AAAAGCACCGGGTCGCTTGTTGCCACCCTGGTCGACATACCGAGCAGTGTTGTTGAAGAC 121611 Query 106978 GCGAAGCATTGGAATAATACCATCTGATTGACCATTTGT-CCCCCGA-ATACGAGATTTA 107035 |||||||| |||| | ||| | ||| ||| || || || ||| || ||| | Sbjct 121610 ACGAAGCATAGGAACGACACCGTTCGATGTACCGTTGGTACCGGCGATGTATGAG--CCA 121553 Query 107036 TTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCA 107095 | || | | | || | | || |||||||| |||||| ||| ||||| ||| Sbjct 121552 GTAGCACGGATACGGTGCACATTCAGACCAATACCACCAGCCATCTTGGAGATCATGGCA 121493 Query 107096 CACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAG 107155 || | | ||||| | ||||| || | || ||| ||||| | | | | |||| Sbjct 121492 CAGGTCTTGAGAGTATCGTAGATTCCCTCAATACTGTCGTCCTTCATATCAACCAAGAAG 121433 Query 107156 CAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTG----TTGCGTG 107211 ||| |||| || || || || || ||||||||||| || || | |||||| Sbjct 121432 CAAGATGACAATTGGGGCTGAGGGGTGCCGGCATTGAAGAGCGTGGGGGAAGCATGCGTG 121373 Query 107212 AATGAACATACCTTGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCC 107271 || |||| | | | |||||| || ||||||||||||||| || || || || || Sbjct 121372 AA-GAACTTGCTT---GACATCAGGTTGTATGTCTCCAAGACTCGCTCGATATCATCACC 121317 Query 107272 GTGGATGCCGATGGCCACACGCATAAACATGT 107303 ||| || | | ||||||||| | ||||| Sbjct 121316 CCAGATACCAACAGACACACGCATGATCATGT 121285 >seq259 Length=112471 Score = 104 bits (114), Expect = 3e-17 Identities = 299/457 (65%), Gaps = 16/457 (4%) Strand=Plus/Plus Query 116986 TAGTCCCCAACTCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 117045 ||||| |||| |||||||| |||||||||||||| || ||||| ||||||||||| Sbjct 41067 TAGTCGGCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCAAGGGAGATGTTTTCCATG 41126 Query 117046 AAGTCAAATGGATTCTTCGCGTTCCAAA-----TGGGTGGCACCCCAACTTGTTTGAGGA 117100 ||||| || || || | || || | | | | || |||| |||| Sbjct 41127 AAGTCGAAGGGGTTGGTGGCCTTGTAGACCTTCTCGTTG-----CCAAGAGCGACAAGGA 41181 Query 117101 GACGATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGAT 117160 ||||||| | || |||||||||||| ||| ||||||||||| |||| || Sbjct 41182 GACGATCAGCGACGAACTCAATGTACTGCTTCATGAGGTCAGAGTTCATGCCGAGAAGGG 41241 Query 117161 TACATGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATGG 117220 ||| || || || || || |||| | | ||||| || || || | | ||| Sbjct 41242 CACAGGGAAGAGCCTCAGTGAGGAACTCCTGTTCAATGGTGACGGCATCAGTGATGATAT 41301 Query 117221 CGTGGATAGTTTCGGTAGTGG---GTCTATTACGCAAAGTCTTGAAGAGCTCCACGGCAA 117277 | || || | | | ||| | | || | || | || ||| || ||||| Sbjct 41302 CTTGAATCATCTGCTTGCTGGCACGGCCCTTTAGGTGAGAGTGGAGGAGG--CA-GGCAA 41358 Query 117278 ACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCA 117337 | || ||| |||||||| || || || || || || || |||||| || || |||| Sbjct 41359 AGTCAGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTAGAGAAGGTCAGACCAGGCA 41418 Query 117338 TGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCT 117397 ||||||| |||||||| | ||| |||| | | ||| | || |||||||||||||| Sbjct 41419 TGAGACCACGCTTCTTGAGCCAGAAAATGGAGGCGAAGGCACCACTGAAGAAGATACCCT 41478 Query 117398 CCACACACGCAAACGCAAAAAGGCGCTCGGCGAAGGA 117434 | || || || |||| ||||| | ||| ||||| Sbjct 41479 CAACGGCAGCGAAAGCAACGAGGCGTTGGGCAAAGGA 41515 >seq754 Length=449793 Score = 87.8 bits (96), Expect = 2e-12 Identities = 123/173 (71%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 155045 ATGGTCGTGTTGCACCACGATCCGGTCTCGCTGTGAAGCATGGTATTCAAGTTGGTGCGG 155104 |||| || |||| || ||||| ||||||||| |||||| ||| | || || | Sbjct 368401 ATGGACGCATTGCCCCTCGATCGGGTCTCGCTTCCAAGCATTTCATTGACACAGGCGCTG 368460 Query 155105 GTGTTATTGATCCCGACTATACAGGTGAAGTCAAAGTCGTTCTCTTCAATCACGGAGACA 155164 |||| || ||| |||| || ||| | ||||| ||| | |||||||| || || Sbjct 368461 GTGTCATCGATGCCGATTACCGCGGTCAGGTCAAGGTCCTGCTCTTCAACCATAACGAAT 368520 Query 155165 AAGACTTTGAGGTAAAGAAAGGGGATCGCATCGCACAACTTGTCCTTGAGCGC 155217 ||||||||||| ||| | || || ||||| || |||||||| || |||||| Sbjct 368521 CCGACTTTGAGGTGAAGGAGGGCGACCGCATTGCTCAACTTGTTCTGGAGCGC 368573 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589974642075400