Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20fujikuroi_20[genbank_20GCA_5F001023045.1_202015-06-09] 835 sequences; 43,096,072 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq447 125 8e-24 >seq447 Length=310704 Score = 125 bits (138), Expect = 8e-24 Identities = 274/407 (67%), Gaps = 9/407 (2%) Strand=Plus/Plus Query 138183 ACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGT 138242 ||| | ||||| || || |||||||| || || || || ||||||||||| ||||| || Sbjct 241803 ACAGCGATAGGGCCAACACCAGGACCGCCGCCGCCGTGGGGAATACAGAAGGTCTTGTGG 241862 Query 138243 AAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACCTACCTGTGCA 138302 | || ||||| || ||||| |||||| ||||| || | ||||| | ||| || Sbjct 241863 AGGTTGAGATGGCAGACATCAGCACCAATGTCACCGGGGCTGCAGAGACCAATCTGAGCG 241922 Query 138303 TTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACGATCTTACATATC 138362 || | || ||||| || | || || |||| |||| || || || | | ||| | Sbjct 241923 TTCATGTTGGCACCGTCCATGTAGACAAGACCGCCATGCTCGTGGACAAGATCACAGACT 241982 Query 138363 TGTCTGATGTTTGTTTCAAATACACCATGAGTCGATGGATATGTAATCATAATACATGAG 138422 || |||| | | || || ||||| ||| || ||||| |||| ||| ||| | Sbjct 241983 TGCTTGATCTCAGGCTCGAAGACACCGAAAGTAGAGGGATAAGTAACCATGATAGCAGCA 242042 Query 138423 AGTTCAAATGTATTCATGATTGCTTTCTT---CTCTAGATCTTTGATGTCTATGTTGCCA 138479 || ||| | | | || || ||| || ||||| | ||| || | ||| ||| Sbjct 242043 AGCTCATCAGCGTGCTTG---GCACACTTGGCCTTGAGATCCTCGATATCCAGGTTACCA 242099 Query 138480 -TCAT--CATCACACTTGACACCTACAACTTTCATTCCTGCCATGACTGCACTAGCAGGA 138536 || | | |||||||||||| ||||| ||||| || |||||| | ||| |||||| Sbjct 242100 GTCTTGCCGTCACACTTGACAGTAACAACCTTCATGCCAGCCATGGCAGCAGAAGCAGGG 242159 Query 138537 TTAGTTCCATGTGCTGACTCTGGTATCAGACATACATTTCTTTTATC 138583 || || || || || || |||| || || || || |||| ||||| Sbjct 242160 TTGGTACCGTGAGCAGAAACTGGGATAAGGCAGACCTTTCGCTTATC 242206 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578992356704200