Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20fujikuroi_20[genbank_20GCA_5F001023045.1_202015-06-09] 835 sequences; 43,096,072 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq705 196 6e-45 seq259 104 3e-17 seq754 87.8 2e-12 >seq705 Length=184299 Score = 196 bits (216), Expect = 6e-45 Identities = 1134/1783 (64%), Gaps = 55/1783 (3%) Strand=Plus/Plus Query 75211 CCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGT 75270 ||||||| ||||| ||||||| || | | || ||| || || || || || || Sbjct 121277 CCCACAGCACATGATCATGCGTGTGTCTGTTGGTATCTGGGGTGATGATATCGAGCGAGT 121336 Query 75271 CTTGGAGACATACGACAAGATGTCCCAAGGTATGTTCATTCACGCAA----CACCAACCC 75326 ||||||||||||| || |||||| | | | |||| |||||||| | || || | Sbjct 121337 CTTGGAGACATACAACCTGATGTC---AAGCAAGTTC-TTCACGCATGCTTCCCCCACGC 121392 Query 75327 TCTTCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGG 75386 |||||||||| || || || || || |||| ||||||| | | | | |||| Sbjct 121393 TCTTCAATGCCGGCACCCCTCAGCCCCAATTGTCATCTTGCTTCTTGGTTGATATGAAGG 121452 Query 75387 AGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGG 75446 | ||| || | || ||||| | ||||| | | ||||| ||||| ||| || Sbjct 121453 ACGACAGTATTGAGGGAATCTACGATACTCTCAAGACCTGTGCCATGATCTCCAAGATGG 121512 Query 75447 CTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTAT-TCGGGGG 75505 |||| |||||||| || | | || | | | || | | ||| || ||| || Sbjct 121513 CTGGTGGTATTGGTCTGAATGTGCACCGTATCCGTGCTACTGG--CTCATACATCGCCGG 121570 Query 75506 -ACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCG 75564 || || ||| ||| | ||| | |||| |||||||| || || ||| ||| || || Sbjct 121571 TACCAACGGTACATCGAACGGTGTCGTTCCTATGCTTCGTGTCTTCAACAACACTGCTCG 121630 Query 75565 CTATGTAAATCAAGCGGGGCGTC--GCAAGG-GGTCCATC-GCGGTCTACTTGGAACCAT 75620 ||||| | || | | ||| | || | ||| | | || ||||| | || || | Sbjct 121631 GTATGTCGACCAGG-GTGGCAACAAGCGACCCGGTGCTTTTGCCATCTACCTCGAGCCTT 121689 Query 75621 GGCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTC 75680 |||| | ||| || | ||||||||||| | || ||||| ||| | || |||| || Sbjct 121690 GGCACTCTGATGTCTTCGAGTTCCTTGATCTCCGTAAGAACCACGGTAAGGAGGAGG-TC 121748 Query 75681 GGTGTA-GAGATCTCTTTTCAT-CCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGA 75738 ||| | || || ||| | | |||| ||||| || || ||||| |||||||| ||||| Sbjct 121749 CGTGCCCGTGACCT-TTTCCTTGCCCTTTGGATCCCTGATCTTTTTATGAAGCGTGTTGA 121807 Query 75739 GGAGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGT 75798 || ||| | ||| | ||| | || || || || || || ||| ||||| Sbjct 121808 AAAGAACGGTGACTGGACACTTATGTGCCCCAACGAGTGCCCTGGCCTCGCCGACTGCTA 121867 Query 75799 GGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGC---CAATGC 75855 || |||||||| || || || ||| |||||| || ||| ||| | | ||| | Sbjct 121868 CGGAGAGGAGTTCGAGGCTCTGTACGAAAAGTACGAGAAGGCGGGCAAGGGTCGCAAGAC 121927 Query 75856 GACTGTACCAGCCGCCGATG-TTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAA 75914 || | || | | || | ||||| | || ||||| | | ||||| ||||| |||| Sbjct 121928 GAT----CAAGGCTCAGAAGCTTTGGTACGCCATTCTTGAGGCCCAGACTGAGACCGGAA 121983 Query 75915 CACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAA 75974 |||| ||||| ||||| ||||| || ||| ||||||||||||||||| | || | Sbjct 121984 ACCCATTCATGCTCTACAAAGATGCCTGCAACCGCAAGAGTAACCAAAAGAACCTCGGTA 122043 Query 75975 CAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGG 76034 | ||| ||||| ||||||||||| |||||| | |||||| | || ||| | Sbjct 122044 CCATCCGAAGCTCCAATCTTTGCACTGAAATTATCGAGTACTGTGCCCCTGACGAGGTCG 122103 Query 76035 CTGTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCA---ATGAAGAGACTCGCA 76091 | || ||||| | || || | | || || | ||| | || ||| || || Sbjct 122104 CCGTCTGCAACCTTGCCTCTCTATCTCTGCCCTCCTTCATCAACTACGATGAGGCTTGC- 122162 Query 76092 CTTTTGATTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAG 76151 | || | | || || || | ||| || |||||| || || ||| Sbjct 122163 --TACGACTTCAAGAAGCTGCACAAGGTCAGTCAGGTTGTTATTCGCAACCTGAACAAGA 122220 Query 76152 TCATTGACAGAAATTTTTATCCCGTTGAGACTGCGCGAAAGTCTAATATGCGACACAGAC 76211 |||| || || || || || || || || || ||| ||||| ||| ||| Sbjct 122221 TCATCGATGTGAACCACTACCCTGTCCAGGAGGCTCGCAACAGTAACATGCGCCACCGAC 122280 Query 76212 CTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATT-TTGTGCCGCTACGCATTT 76270 | |||||| | |||||||| ||||| || |||| || || | || ||| | || Sbjct 122281 CCATTGGTCTTGGTGTTCAGGGTCTTGCCGATGCTTTCCTTGCTCTG-CGCATGCCCTTC 122339 Query 76271 GATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCC 76330 || || || || ||| | ||| | || ||||| ||||| |||||||| | Sbjct 122340 GAGTCCCCCGAGGCTCGTGAGCTCAATAAGCAGATTTTTGAGACCATTTATCACGCTGCG 122399 Query 76331 CTGGAGGCGAGTTGTG-AATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTC 76389 ||| || ||| | ||||| | | | ||| |||| || || ||||||| Sbjct 122400 CTGACTGC-CTCCGTGCAGCTGGCTAAGGAAGAGGGTCCCTACTCCACCTTCAAGGGTTC 122458 Query 76390 TCCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAAGCT--CAAC 76447 ||||| || | || | || ||||| || |||| |||| || || || || | | Sbjct 122459 CCCCGCCTCTGAGGGTATTCTCCAGTTCGACATGT-GGAACGTCAAGCC-CTCTGACCTC 122516 Query 76448 TACGACTGGGA---TGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTT 76504 | |||||||| | ||| ||||| ||||| | || | || |||||||| Sbjct 122517 TGGGACTGGGAGACTCTTCGAGAGGAA---GTCAAGACACACGGCATCCGCAACAGTCTA 122573 Query 76505 TTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTT 76564 | | || || ||||| || ||| ||| | || || |||| || || || ||||| Sbjct 122574 CTCCTTGCTCCTATGCCTACTGCCAGTACCTCCCAGATTCTGGGCAACAACGAGTGCTTC 122633 Query 76565 GAACCATACACAACAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCATTGTC 76624 || || ||||| | || ||||||| | | ||||| ||||||||| |||| Sbjct 122634 GAGCCCTACACCTCCAATATCTACCAACGCCGTGTTCTCGCTGGTGAGTTTCAGGTTGTT 122693 Query 76625 AACAAGCACCTCGTCAATGACCTCAAGAAGATTGGTCTCTGGTCCAAGGATATGAAGGAT 76684 ||| || |||| ||||| | || ||||| |||||| | | ||||||| | Sbjct 122694 AACCCCTGGCTGCTCAAGGACCTTGTCGACATGGGTCTGTGGTCCGATGCTATGAAGAAC 122753 Query 76685 CTCATGGTGAAAGCGGGTGGTTCCATTCAAAATATCTCAGATATCCCAGATGATATCAAG 76744 | ||| | | | ||| |||||||| || || | | ||||| | ||| ||||| Sbjct 122754 CGCATCATTGCTGAGAATGGATCCATTCAGAACATTCCCAACATCCCTGCCGATGTCAAG 122813 Query 76745 AATCTCTACCGCACAGTGTGGGAAATCAAGATGAAAGATGTCATTGACATGGCCGCAGAT 76804 ||| || || || ||||| ||| | | ||| | | ||||| || ||| Sbjct 122814 GCTCTGTATAAGACTGTTTGGGAGATCTCTCAGCGCCAGGTCGTCCAGATGGCTGCTGAT 122873 Query 76805 CGTGGTCGCTTCATTGATCAAAGTCAAAGT--ATGAATCTATTCATGGAAAGTCCAACGA 76862 || ||| ||||||||||| |||| ||| |||| | |||| | || |||| Sbjct 122874 CGAGGTGCCTTCATTGATC--AGTCCCAGTCACTGAACATCCACATGAAGGACCCCACGA 122931 Query 76863 TGTCCAAGCTCTCTTCTATGCA-TATGTACGCGTGGAAACAGGGGCTCAAAACCGGAATG 76921 || |||| || | ||||| | || | || ||||| | || ||||| || || ||| Sbjct 122932 TGGGCAAGATCACCAGCATGCACTTTGCAGGC-TGGAAGCTTGGCCTCAAGACTGGCATG 122990 Query 76922 TACTATCTCCGATCAAAGGCGAAAGCCCGACCAATTCAGTTCA 76964 ||||| || || || |||| || || |||||||||| Sbjct 122991 TACTACCTTCGTACACAGGCTGCTGCTGCTCCTATTCAGTTCA 123033 >seq259 Length=112471 Score = 104 bits (114), Expect = 3e-17 Identities = 299/457 (65%), Gaps = 16/457 (4%) Strand=Plus/Minus Query 65068 TCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCA 65127 ||||| ||| | ||||| |||| || || || ||||||||||||||| || | Sbjct 41515 TCCTTTGCCCAACGCCTCGTTGCTTTCGCTGCCGTTGAGGGTATCTTCTTCAGTGGTGCC 41456 Query 65128 TTCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAAT 65187 ||| | | |||| ||| | |||||||| ||||||||||| || || |||||| || Sbjct 41455 TTCGCCTCCATTTTCTGGCTCAAGAAGCGTGGTCTCATGCCTGGTCTGACCTTCTCTAAC 41396 Query 65188 GAACTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGCCGTGGAGCTCTTCAAGACT 65247 || || || || || || |||||||| ||| || |||||| || ||| || | || Sbjct 41395 GAGCTCATCTCTCGTGACGAGGGTCTTCACACTGACTTTGCC-TG--CCTCCTCCACTCT 41339 Query 65248 TTGCGTAATAGAC---CCACTACCGAAACTATCCACGCCATCGTGAAAGAGGCGGTTGAG 65304 | || | | ||| | | | || || | ||| | | || || || Sbjct 41338 CACCTAAAGGGCCGTGCCAGCAAGCAGATGATTCAAGATATCATCACTGATGCCGTCACC 41279 Query 65305 ATTGAGAAAGGGTTCATCTTGGACGCACTCCCATGTAATCTCATCGGTATGAACTCTGAG 65364 ||||| | | |||| || || || || || ||| || |||| ||||||||||| Sbjct 41278 ATTGAACAGGAGTTCCTCACTGAGGCTCTTCCCTGTGCCCTTCTCGGCATGAACTCTGAC 41219 Query 65365 AAGATGTCCGAGTACATTGAGTATGTGTCGGATCGTCTCCTCAAACAAGTTGGGGTGCCA 65424 ||| |||||||||||| || | ||||||||||| |||| || Sbjct 41218 CTCATGAAGCAGTACATTGAGTTCGTCGCTGATCGTCTCCTTGTCGCTCTTGG-----CA 41164 Query 65425 CCCA-----TTTGGAACGCGAAGAATCCATTTGACTTTATGGAAAACATTAGCCTTGATG 65479 | | | | || || | || || || ||||| ||||||||||| ||||| | Sbjct 41163 ACGAGAAGGTCTACAAGGCCACCAACCCCTTCGACTTCATGGAAAACATCTCCCTTGGCG 41104 Query 65480 GGAAGACCAACTTCTTTGAGAAGCGAGTTGGGGACTA 65516 | |||||||||||||| |||||||| |||| ||||| Sbjct 41103 GCAAGACCAACTTCTTCGAGAAGCGTGTTGCCGACTA 41067 >seq754 Length=449793 Score = 87.8 bits (96), Expect = 2e-12 Identities = 123/173 (71%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 27858 GCGCTCAAGGACAAGTTGTGCGATGCGATCCCCTTTCTTTACCTCAAAGTCTTTGTCTCC 27917 |||||| || |||||||| || ||||| || || | ||| ||||||||||| || Sbjct 368573 GCGCTCCAGAACAAGTTGAGCAATGCGGTCGCCCTCCTTCACCTCAAAGTCGGATTCGTT 368514 Query 27918 GTGATTGAAGAGAACGACTTTGACTTCACCTGTATAGTCGGGATCAATAACACCCGCACC 27977 || |||||||| | ||| ||||| | ||| || |||| ||| || ||||| || || Sbjct 368513 ATGGTTGAAGAGCAGGACCTTGACCTGACCGCGGTAATCGGCATCGATGACACCAGCGCC 368454 Query 27978 AACTTGAATACCATGCTTCACAGCGAGACCGGATCGTGGTGCAACACGACCAT 28030 | ||| |||||| ||||||||| ||||| || |||| || |||| Sbjct 368453 TGTGTCAATGAAATGCTTGGAAGCGAGACCCGATCGAGGGGCAATGCGTCCAT 368401 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596563373304800