Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20fujikuroi_20[genbank_20GCA_5F001023045.1_202015-06-09]
835 sequences; 43,096,072 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq705 168 2e-36
seq259 147 6e-30
seq537 107 6e-18
seq344 107 6e-18
>seq705
Length=184299
Score = 168 bits (186), Expect = 2e-36
Identities = 573/881 (65%), Gaps = 19/881 (2%)
Strand=Plus/Minus
Query 155630 GTATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTT 155689
||| || | ||| ||| ||| || || || || |||||| || | ||||| |||||
Sbjct 122084 GTACTCGATAATTTCAGTGCAAAGATTGGAGCTTCGGATGGTACCGAGGTTCTTTTGGTT 122025
Query 155690 AGATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGC 155749
| || | ||| || ||||| ||||| || ||| ||||| |||| ||||| |||| ||
Sbjct 122024 ACTCTTGCGGTTGCAGGCATCTTTGTAGAGCATGAATGGGTTTCCGGTCTCAGTCTGGGC 121965
Query 155750 GTCCAGAATCTTTAGCCAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTTCCGA 155809
|| ||||| ||| || | | || || || |||| |||| ||
Sbjct 121964 CTCAAGAATGGCGTACCAAAGCTTCTGAGCCTTGATCGTCTTGCGACCCTTGCCCGCCTT 121905
Query 155810 CTCATA--TTTCATATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGG 155867
||| || |||| || | ||| | | | ||||| ||||| || || || ||||||
Sbjct 121904 CTCGTACTTTTCGTACAGAGCCTC--GAACTCCTCTCCGTAGCAGTCGGCGAGGCCAGGG 121847
Query 155868 CACTTATCGGGGCAAAACAGCGACCA---AATTTTATTACCGATTACACGCTCCATAAAT 155924
|||| | |||||| | || | ||| | || || | | |||||| ||||||
Sbjct 121846 CACTCGTTGGGGCACATAAGTGTCCAGTCACCGTTCTTTTCAA---CACGCTTCATAAAA 121790
Query 155925 ACATCACTCGCCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCCGTGA 155984
| |||| ||||| ||| ||||||||| | || |||||| | |||||
Sbjct 121789 AGATCAGGGATCCAAAGGGCAAGGAAAAGGTCACGGGCACGGACCTCCTCCTTACCGTGG 121730
Query 155985 TTCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCA 156044
||||| || || || | ||| || | ||||| || ||||| || || || |||
Sbjct 121729 TTCTTACGGAGATCAAGGAACTCGAAGACATCAGAGTGCCAAGGCTCGAGGTAGATGGCA 121670
Query 156045 AAACTACCATTCCTCTTG---CCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACA 156101
||| ||| | |||| |||||||| || |||||||||||||| || |||||||||
Sbjct 121669 AAAGCACCGGGTCGCTTGTTGCCACCCTGGTCGACATACCGAGCAGTGTTGTTGAAGACA 121610
Query 156102 CCTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGAT 156161
| |||||||||| | ||| || || || || ||||| ||| || | || ||||
Sbjct 121609 CGAAGCATAGGAACGACACCGTTCGATGTACCGTTGGTACCGGCGATGTATGAGCCAGTA 121550
Query 156162 GAGCGAACATTATGAATATGTAGTCCAATACCACCTGACCAT-TTAGAAATTTGAGCGCA 156220
| || | | || | || || ||||||||||| | |||| || || || || ||
Sbjct 121549 GCACGGATACGGTGCACATTCAGACCAATACCACCAG-CCATCTTGGAGATCATGGCACA 121491
Query 156221 TTCCTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCAT-TGATAGTAGATAGC 156279
||| | ||||| | | || || |||||| || || | ||| | | ||| |||
Sbjct 121490 GGTCTTGAGAGTATCGTAGATTCCCTCAATACTGTCGTCCTTCATATCAACCAAGA-AGC 121432
Query 156280 ACGAACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAA 156339
| || ||||| || | || || || || ||||| || || || | ||||| | |
Sbjct 121431 AAGATGACAATTGGGGCTGAGGGGTGCCGGCATTGAAGAGCGTGGGGGAAGCATGCGTGA 121372
Query 156340 AATACTTATTAGACATATAATCGTATGTCTCCTTAATCTTCTCAAGATTA-GACCCGTGA 156398
| |||| | ||||| | |||||||||| | ||| | || | |||| |
Sbjct 121371 AGAACTTGCTTGACATCAGGTTGTATGTCTCCAAGACTCGCTCGATATCATCACCCCAG- 121313
Query 156399 ATACAGATAGAGACCCTCATCCACATATGCTGAGGACGCTCTACAATCACTCCATCAATT 156458
|||| | ||| || | ||| ||| ||||| || ||||| |||||| || |||||
Sbjct 121312 ATACCAACAGACACACGCATGATCATGTGCTGTGGGCGCTCGACAATCTTACCGTCAATC 121253
Query 156459 CGCAGAAGGTATGCGCGTTCCAGAGTTTTAAACCCGAAATA 156499
|| ||||||| || |||| ||| || || || || ||
Sbjct 121252 TTGAGGAGGTATGATCGCTCCAAAGTCTTGAAGCCAAAGTA 121212
>seq259
Length=112471
Score = 147 bits (162), Expect = 6e-30
Identities = 349/523 (67%), Gaps = 6/523 (1%)
Strand=Plus/Minus
Query 133305 CCGAAGCCCGTGCCTTTTATGGGCTACAGATTGCGATGGAAAATATCCATTCTATCACAT 133364
|||| || ||| || || || | ||||| |||||| || || || || || |
Sbjct 41706 CCGAGGCTCGTTGTTTCTACGGCTTCCAGATCATGATGGAGAACATTCACTCCGAGACCT 41647
Query 133365 ATTCTACTCTAATTGATACTTACATCAAAGATACCGTCCAGAAGCACAAACTATTCAACG 133424
| || || || || || || ||||| || ||| |||| | | || |||||||
Sbjct 41646 ACTCCCTCCTCATCGACACCTATATCAAGGAGCCCGCCCAGCGAACCTACCTTTTCAACG 41587
Query 133425 CCATTAGCGAAT-TTCCTTGTATTAAAAAGAAATCTGACTGGGCTATTAAATGGATCCAG 133483
||||| | || |||| || || |||||| |||||||||| || |||||||||
Sbjct 41586 CCATT-GAGACCATTCCCTGCATCCGAAAGAAGGCTGACTGGGCCATCCGATGGATCCAA 41528
Query 133484 GACAAGCGTGCGAGTTTTGCTACTCGTCTCGTTGCTTTTGCTGTAGTAGAGGGCAttttt 133543
|| ||| | ||||| || ||||||||||| |||| || ||||| || ||
Sbjct 41527 GATAAGGACTCTTCCTTTGCCCAACGCCTCGTTGCTTTCGCTGCCGTTGAGGGTATCTTC 41468
Query 133544 ttCAGTGGTGCGTTCTGCTCTATTTTTTGGCTTAAAAAGCGTGGTATTCTACCTGGACTG 133603
||||||||||| ||| ||| ||||| ||||| || ||||||||| | | ||||| |||
Sbjct 41467 TTCAGTGGTGCCTTCGCCTCCATTTTCTGGCTCAAGAAGCGTGGTCTCATGCCTGGTCTG 41408
Query 133604 TGTTTTTCTAACGAACTTATTTCAAGGGACGAGGCACTTCACACCGAATTTGCCGTTTTA 133663
|| |||||||| || || || | ||||||| |||||||| || |||||| |
Sbjct 41407 ACCTTCTCTAACGAGCTCATCTCTCGTGACGAGGGTCTTCACACTGACTTTGCCTGCCTC 41348
Query 133664 CTTCACTCTAAATTAGAGCGACCACTCAAAAAGAATAAGATTGAAGAAATTATTAGAGAA 133723
|| |||||| | || || | | || ||| | | |||| |||| || || | ||
Sbjct 41347 CTCCACTCTCACCTAAAGGGCCGTGCCAGCAAGCAGATGATTCAAGATATCATCACTGAT 41288
Query 133724 GCGGTTGAAATTGAGGTTGAATTTATCAATAGTGCTCTGCC--GTGCCGTTTAATTGGTA 133781
|| || ||||| || || ||| | ||||| || ||||| || | || |
Sbjct 41287 GCCGTCACCATTGAACAGGAGTTCCTCACTGAGGCTCTTCCCTGTGCCCTT--CTCGGCA 41230
Query 133782 TGAATGATGTGCTGATGCAGCGTTATATTGAATTTGTAGCTGA 133824
|||| || || ||| ||| || ||||| || || |||||
Sbjct 41229 TGAACTCTGACCTCATGAAGCAGTACATTGAGTTCGTCGCTGA 41187
>seq537
Length=238418
Score = 107 bits (118), Expect = 6e-18
Identities = 122/164 (74%), Gaps = 0/164 (0%)
Strand=Plus/Minus
Query 251407 ATAAGACCACACTTATTACACACATGGACGCTGTAAGCATCAGATGCGTCATATAGCCGA 251466
|| || ||||| | | || || ||||| | | ||||||| || | ||| | || ||
Sbjct 136647 ATGAGTCCACAAATCTCGCAGACGTGGACACGGAAAGCATCCGACACCTCAAACAGACGC 136588
Query 251467 CCCTTGGTGAAGCGAGATGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAA 251526
|||| ||| || ||||| || | ||||||||||||||| |||||||| |||||
Sbjct 136587 TCCTTCAGGAAAGCAGCGGCACCATGAGCAATCATACAATCACGTTCCATTTCTCCGAAT 136528
Query 251527 CGAAGACCACCATCGCGAGCCCTACCCTCGGCAGGCTGACGAGT 251570
|| ||||||||||| ||||| | ||||||| ||||||| || ||
Sbjct 136527 CGGAGACCACCATCACGAGCACGACCCTCGACAGGCTGTCGGGT 136484
>seq344
Length=482239
Score = 107 bits (118), Expect = 6e-18
Identities = 189/273 (69%), Gaps = 2/273 (1%)
Strand=Plus/Minus
Query 302572 TCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCT 302631
||||||| | ||||| || || |||||||||||||| ||| | || || || ||
Sbjct 445560 TCTTCCAGAGCCTTGACCAATCGTCGCTGAATATAACCTGTTTCGGCAGTCTTGACGGCA 445501
Query 302632 GTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGT-AG 302690
|| ||||| ||||| | |||||| |||| || |||||||| | ||| | || || ||
Sbjct 445500 GTGTCAATAAGACCTTCTCGACCAGCCATGGCGTGGAAGAAGAACTC-GCTGGGAGTGAG 445442
Query 302691 CCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGT 302750
|| | | | ||| |||| || || ||||| ||||| || || | ||| ||||||
Sbjct 445441 ACCACGGAGGTAAGAGTTCTCGACAAAGCCACGGGCCTCAGGTGAGTAATCGTCCTTGGT 445382
Query 302751 AAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTG 302810
||||| || | || | | || | ||| | || |||||||| || ||||| | ||
Sbjct 445381 GAAGTGAGGTAATGTGCGATACTTGAAACCGAAAGGAATACGCTTGCCTTCAACAATTTG 445322
Query 302811 CTGTCCCAGGCACGAAATCATCTGCGAAATATT 302843
||| || | || | |||| || ||||||||
Sbjct 445321 CTGACCGACAAGCGCAGTCATTTGAGAAATATT 445289
Score = 93.3 bits (102), Expect = 1e-13
Identities = 105/140 (75%), Gaps = 3/140 (2%)
Strand=Plus/Minus
Query 301813 AGAATTTCTTCAATACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGCA 301872
|||||||| | | ||| || |||||| | || ||||| |||||||| ||||||||
Sbjct 446337 AGAATTTCCTTGAGACGTGGCACACCAAGAGTAACGTT---CTTGGACGACACACCAGCG 446281
Query 301873 AAGTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAATC 301932
|| ||||| || ||||| || | ||||||| |||||||||||| || || || |
Sbjct 446280 AAATGGAAGGTGTTCAGTGTCATCTGAGTAGCAGGCTCACCAATAGACTGCGCAGCCAGA 446221
Query 301933 ATACCAACCATTTCTCCTGG 301952
| |||||||||||| || ||
Sbjct 446220 ACACCAACCATTTCACCAGG 446201
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471801853851395
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |