Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20fujikuroi_20[genbank_20GCA_5F001023045.1_202015-06-09] 835 sequences; 43,096,072 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq705 168 2e-36 seq259 147 6e-30 seq537 107 6e-18 seq344 107 6e-18 >seq705 Length=184299 Score = 168 bits (186), Expect = 2e-36 Identities = 573/881 (65%), Gaps = 19/881 (2%) Strand=Plus/Minus Query 155630 GTATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTT 155689 ||| || | ||| ||| ||| || || || || |||||| || | ||||| ||||| Sbjct 122084 GTACTCGATAATTTCAGTGCAAAGATTGGAGCTTCGGATGGTACCGAGGTTCTTTTGGTT 122025 Query 155690 AGATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGC 155749 | || | ||| || ||||| ||||| || ||| ||||| |||| ||||| |||| || Sbjct 122024 ACTCTTGCGGTTGCAGGCATCTTTGTAGAGCATGAATGGGTTTCCGGTCTCAGTCTGGGC 121965 Query 155750 GTCCAGAATCTTTAGCCAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTTCCGA 155809 || ||||| ||| || | | || || || |||| |||| || Sbjct 121964 CTCAAGAATGGCGTACCAAAGCTTCTGAGCCTTGATCGTCTTGCGACCCTTGCCCGCCTT 121905 Query 155810 CTCATA--TTTCATATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGG 155867 ||| || |||| || | ||| | | | ||||| ||||| || || || |||||| Sbjct 121904 CTCGTACTTTTCGTACAGAGCCTC--GAACTCCTCTCCGTAGCAGTCGGCGAGGCCAGGG 121847 Query 155868 CACTTATCGGGGCAAAACAGCGACCA---AATTTTATTACCGATTACACGCTCCATAAAT 155924 |||| | |||||| | || | ||| | || || | | |||||| |||||| Sbjct 121846 CACTCGTTGGGGCACATAAGTGTCCAGTCACCGTTCTTTTCAA---CACGCTTCATAAAA 121790 Query 155925 ACATCACTCGCCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCCGTGA 155984 | |||| ||||| ||| ||||||||| | || |||||| | ||||| Sbjct 121789 AGATCAGGGATCCAAAGGGCAAGGAAAAGGTCACGGGCACGGACCTCCTCCTTACCGTGG 121730 Query 155985 TTCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCA 156044 ||||| || || || | ||| || | ||||| || ||||| || || || ||| Sbjct 121729 TTCTTACGGAGATCAAGGAACTCGAAGACATCAGAGTGCCAAGGCTCGAGGTAGATGGCA 121670 Query 156045 AAACTACCATTCCTCTTG---CCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACA 156101 ||| ||| | |||| |||||||| || |||||||||||||| || ||||||||| Sbjct 121669 AAAGCACCGGGTCGCTTGTTGCCACCCTGGTCGACATACCGAGCAGTGTTGTTGAAGACA 121610 Query 156102 CCTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGAT 156161 | |||||||||| | ||| || || || || ||||| ||| || | || |||| Sbjct 121609 CGAAGCATAGGAACGACACCGTTCGATGTACCGTTGGTACCGGCGATGTATGAGCCAGTA 121550 Query 156162 GAGCGAACATTATGAATATGTAGTCCAATACCACCTGACCAT-TTAGAAATTTGAGCGCA 156220 | || | | || | || || ||||||||||| | |||| || || || || || Sbjct 121549 GCACGGATACGGTGCACATTCAGACCAATACCACCAG-CCATCTTGGAGATCATGGCACA 121491 Query 156221 TTCCTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCAT-TGATAGTAGATAGC 156279 ||| | ||||| | | || || |||||| || || | ||| | | ||| ||| Sbjct 121490 GGTCTTGAGAGTATCGTAGATTCCCTCAATACTGTCGTCCTTCATATCAACCAAGA-AGC 121432 Query 156280 ACGAACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAA 156339 | || ||||| || | || || || || ||||| || || || | ||||| | | Sbjct 121431 AAGATGACAATTGGGGCTGAGGGGTGCCGGCATTGAAGAGCGTGGGGGAAGCATGCGTGA 121372 Query 156340 AATACTTATTAGACATATAATCGTATGTCTCCTTAATCTTCTCAAGATTA-GACCCGTGA 156398 | |||| | ||||| | |||||||||| | ||| | || | |||| | Sbjct 121371 AGAACTTGCTTGACATCAGGTTGTATGTCTCCAAGACTCGCTCGATATCATCACCCCAG- 121313 Query 156399 ATACAGATAGAGACCCTCATCCACATATGCTGAGGACGCTCTACAATCACTCCATCAATT 156458 |||| | ||| || | ||| ||| ||||| || ||||| |||||| || ||||| Sbjct 121312 ATACCAACAGACACACGCATGATCATGTGCTGTGGGCGCTCGACAATCTTACCGTCAATC 121253 Query 156459 CGCAGAAGGTATGCGCGTTCCAGAGTTTTAAACCCGAAATA 156499 || ||||||| || |||| ||| || || || || || Sbjct 121252 TTGAGGAGGTATGATCGCTCCAAAGTCTTGAAGCCAAAGTA 121212 >seq259 Length=112471 Score = 147 bits (162), Expect = 6e-30 Identities = 349/523 (67%), Gaps = 6/523 (1%) Strand=Plus/Minus Query 133305 CCGAAGCCCGTGCCTTTTATGGGCTACAGATTGCGATGGAAAATATCCATTCTATCACAT 133364 |||| || ||| || || || | ||||| |||||| || || || || || | Sbjct 41706 CCGAGGCTCGTTGTTTCTACGGCTTCCAGATCATGATGGAGAACATTCACTCCGAGACCT 41647 Query 133365 ATTCTACTCTAATTGATACTTACATCAAAGATACCGTCCAGAAGCACAAACTATTCAACG 133424 | || || || || || || ||||| || ||| |||| | | || ||||||| Sbjct 41646 ACTCCCTCCTCATCGACACCTATATCAAGGAGCCCGCCCAGCGAACCTACCTTTTCAACG 41587 Query 133425 CCATTAGCGAAT-TTCCTTGTATTAAAAAGAAATCTGACTGGGCTATTAAATGGATCCAG 133483 ||||| | || |||| || || |||||| |||||||||| || ||||||||| Sbjct 41586 CCATT-GAGACCATTCCCTGCATCCGAAAGAAGGCTGACTGGGCCATCCGATGGATCCAA 41528 Query 133484 GACAAGCGTGCGAGTTTTGCTACTCGTCTCGTTGCTTTTGCTGTAGTAGAGGGCAttttt 133543 || ||| | ||||| || ||||||||||| |||| || ||||| || || Sbjct 41527 GATAAGGACTCTTCCTTTGCCCAACGCCTCGTTGCTTTCGCTGCCGTTGAGGGTATCTTC 41468 Query 133544 ttCAGTGGTGCGTTCTGCTCTATTTTTTGGCTTAAAAAGCGTGGTATTCTACCTGGACTG 133603 ||||||||||| ||| ||| ||||| ||||| || ||||||||| | | ||||| ||| Sbjct 41467 TTCAGTGGTGCCTTCGCCTCCATTTTCTGGCTCAAGAAGCGTGGTCTCATGCCTGGTCTG 41408 Query 133604 TGTTTTTCTAACGAACTTATTTCAAGGGACGAGGCACTTCACACCGAATTTGCCGTTTTA 133663 || |||||||| || || || | ||||||| |||||||| || |||||| | Sbjct 41407 ACCTTCTCTAACGAGCTCATCTCTCGTGACGAGGGTCTTCACACTGACTTTGCCTGCCTC 41348 Query 133664 CTTCACTCTAAATTAGAGCGACCACTCAAAAAGAATAAGATTGAAGAAATTATTAGAGAA 133723 || |||||| | || || | | || ||| | | |||| |||| || || | || Sbjct 41347 CTCCACTCTCACCTAAAGGGCCGTGCCAGCAAGCAGATGATTCAAGATATCATCACTGAT 41288 Query 133724 GCGGTTGAAATTGAGGTTGAATTTATCAATAGTGCTCTGCC--GTGCCGTTTAATTGGTA 133781 || || ||||| || || ||| | ||||| || ||||| || | || | Sbjct 41287 GCCGTCACCATTGAACAGGAGTTCCTCACTGAGGCTCTTCCCTGTGCCCTT--CTCGGCA 41230 Query 133782 TGAATGATGTGCTGATGCAGCGTTATATTGAATTTGTAGCTGA 133824 |||| || || ||| ||| || ||||| || || ||||| Sbjct 41229 TGAACTCTGACCTCATGAAGCAGTACATTGAGTTCGTCGCTGA 41187 >seq537 Length=238418 Score = 107 bits (118), Expect = 6e-18 Identities = 122/164 (74%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 251407 ATAAGACCACACTTATTACACACATGGACGCTGTAAGCATCAGATGCGTCATATAGCCGA 251466 || || ||||| | | || || ||||| | | ||||||| || | ||| | || || Sbjct 136647 ATGAGTCCACAAATCTCGCAGACGTGGACACGGAAAGCATCCGACACCTCAAACAGACGC 136588 Query 251467 CCCTTGGTGAAGCGAGATGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAA 251526 |||| ||| || ||||| || | ||||||||||||||| |||||||| ||||| Sbjct 136587 TCCTTCAGGAAAGCAGCGGCACCATGAGCAATCATACAATCACGTTCCATTTCTCCGAAT 136528 Query 251527 CGAAGACCACCATCGCGAGCCCTACCCTCGGCAGGCTGACGAGT 251570 || ||||||||||| ||||| | ||||||| ||||||| || || Sbjct 136527 CGGAGACCACCATCACGAGCACGACCCTCGACAGGCTGTCGGGT 136484 >seq344 Length=482239 Score = 107 bits (118), Expect = 6e-18 Identities = 189/273 (69%), Gaps = 2/273 (1%) Strand=Plus/Minus Query 302572 TCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCT 302631 ||||||| | ||||| || || |||||||||||||| ||| | || || || || Sbjct 445560 TCTTCCAGAGCCTTGACCAATCGTCGCTGAATATAACCTGTTTCGGCAGTCTTGACGGCA 445501 Query 302632 GTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGT-AG 302690 || ||||| ||||| | |||||| |||| || |||||||| | ||| | || || || Sbjct 445500 GTGTCAATAAGACCTTCTCGACCAGCCATGGCGTGGAAGAAGAACTC-GCTGGGAGTGAG 445442 Query 302691 CCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGT 302750 || | | | ||| |||| || || ||||| ||||| || || | ||| |||||| Sbjct 445441 ACCACGGAGGTAAGAGTTCTCGACAAAGCCACGGGCCTCAGGTGAGTAATCGTCCTTGGT 445382 Query 302751 AAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTG 302810 ||||| || | || | | || | ||| | || |||||||| || ||||| | || Sbjct 445381 GAAGTGAGGTAATGTGCGATACTTGAAACCGAAAGGAATACGCTTGCCTTCAACAATTTG 445322 Query 302811 CTGTCCCAGGCACGAAATCATCTGCGAAATATT 302843 ||| || | || | |||| || |||||||| Sbjct 445321 CTGACCGACAAGCGCAGTCATTTGAGAAATATT 445289 Score = 93.3 bits (102), Expect = 1e-13 Identities = 105/140 (75%), Gaps = 3/140 (2%) Strand=Plus/Minus Query 301813 AGAATTTCTTCAATACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGCA 301872 |||||||| | | ||| || |||||| | || ||||| |||||||| |||||||| Sbjct 446337 AGAATTTCCTTGAGACGTGGCACACCAAGAGTAACGTT---CTTGGACGACACACCAGCG 446281 Query 301873 AAGTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAATC 301932 || ||||| || ||||| || | ||||||| |||||||||||| || || || | Sbjct 446280 AAATGGAAGGTGTTCAGTGTCATCTGAGTAGCAGGCTCACCAATAGACTGCGCAGCCAGA 446221 Query 301933 ATACCAACCATTTCTCCTGG 301952 | |||||||||||| || || Sbjct 446220 ACACCAACCATTTCACCAGG 446201 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471801853851395