Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20fujikuroi_20[genbank_20GCA_5F001023045.1_202015-06-09] 835 sequences; 43,096,072 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq259 136 6e-26 seq705 118 2e-20 seq532 107 3e-17 seq15 105 1e-16 >seq259 Length=112471 Score = 136 bits (150), Expect = 6e-26 Identities = 230/328 (70%), Gaps = 5/328 (2%) Strand=Plus/Plus Query 794340 ACCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTT 794399 ||| ||||| ||| ||| | ||||| ||| || || |||||||| || ||||| Sbjct 41372 ACCCTCGTCACGAGAGATGAGCTCGTTAGAGAAGGTCAGACCAGGCATGAGACCACGCTT 41431 Query 794400 CTTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 794459 ||||||||| || |||| ||| || ||| ||||| ||||| ||||| || || Sbjct 41432 CTTGAGCCAGAAAATGGAGGCGAAGGCACCACTGAAGAAGATACCCTCAACGGCAGCGAA 41491 Query 794460 GCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGCCCA 794519 | ||||| || | |||||| | || || | | | | |||||| || ||||| Sbjct 41492 AGCAACGAGGCGTTGGGCAAAGGAAG--AGTCCTTATCT-TGGATCCATCGGATGGCCCA 41548 Query 794520 CTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGT-GGTCCTTCT 794578 || ||||| || | | |||| | || || |||||| || |||| ||| | || Sbjct 41549 GTCAGCCTTCTTTCGGATGCAGGGAATGGTCTCAATGGCGTTGAAAAGGTAGGTTCG-CT 41607 Query 794579 CGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTT 794638 | | || ||||||| ||||||||||||||||| ||||||||||| ||||| ||||| | Sbjct 41608 GGGCGGGCTCCTTGATATAGGTGTCGATGAGGAGGGAGTAGGTCTCGGAGTGAATGTTCT 41667 Query 794639 CGATGGCGATCTGGAAGCCATAAAAGCA 794666 | || |||||||||||| || || || Sbjct 41668 CCATCATGATCTGGAAGCCGTAGAAACA 41695 Score = 109 bits (120), Expect = 9e-18 Identities = 176/251 (70%), Gaps = 4/251 (2%) Strand=Plus/Plus Query 793892 GACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAG 793951 ||| || ||||| || ||| | || ||| |||||| |||||||||||||| | || Sbjct 41051 GACACCGGCCTTTTGGTAGTCGGCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCAAG 41110 Query 793952 CGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCC--G 794009 ||||| ||||| | ||| ||||||| | | |||| ||||||| || | Sbjct 41111 GGAGATGTTTTCCATGAAGTCGAAGGGGTTGGTGGCCTTGTAGACCTTCTCGTTGCCAAG 41170 Query 794010 AGCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTC 794069 ||||| |||| || || || |||||||| ||||||||||| ||||||| | | |||| Sbjct 41171 AGCGA--CAAGGAGACGATCAGCGACGAACTCAATGTACTGCTTCATGAGGTCAGAGTTC 41228 Query 794070 ATGCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCC 794129 ||||||| || || ||| || | ||| ||| ||||| | || || |||||| Sbjct 41229 ATGCCGAGAAGGGCACAGGGAAGAGCCTCAGTGAGGAACTCCTGTTCAATGGTGACGGCA 41288 Query 794130 TCGATGATGAT 794140 || ||||||| Sbjct 41289 TCAGTGATGAT 41299 >seq705 Length=184299 Score = 118 bits (130), Expect = 2e-20 Identities = 181/258 (70%), Gaps = 0/258 (0%) Strand=Plus/Minus Query 2073540 CTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGA 2073599 |||||||||||| || || |||| ||| ||||| || ||||| || || | ||||| || Sbjct 121643 CTGGTCGACATACCGAGCAGTGTTGTTGAAGACACGAAGCATAGGAACGACACCGTTCGA 121584 Query 2073600 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCC 2073659 |||||||| || || | ||| | ||| | || || | |||| | | || Sbjct 121583 TGTACCGTTGGTACCGGCGATGTATGAGCCAGTAGCACGGATACGGTGCACATTCAGACC 121524 Query 2073660 GATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTC 2073719 || || || ||| ||||||||| | || || | || || || |||||||| ||||| Sbjct 121523 AATACCACCAGCCATCTTGGAGATCATGGCACAGGTCTTGAGAGTATCGTAGATTCCCTC 121464 Query 2073720 GATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCC 2073779 || |||| ||||||| || | || ||||| || || ||| || | | ||||| Sbjct 121463 AATACTGTCGTCCTTCATATCAACCAAGAAGCAAGATGACAATTGGGGCTGAGGGGTGCC 121404 Query 2073780 GGCATTGAAGAGCGTGGG 2073797 |||||||||||||||||| Sbjct 121403 GGCATTGAAGAGCGTGGG 121386 >seq532 Length=144084 Score = 107 bits (118), Expect = 3e-17 Identities = 79/92 (86%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530 |||||||||||| |||||||||||||| |||||||||||| |||| ||||| ||| | | Sbjct 6831 GTACTTGGTGACAGCCTTGGTACCCTCAGAGACGGCGTGCTTGGCAAGTTCACCGGGGAG 6772 Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCGGG 1485562 |||||| || || | |||||||||||| |||| Sbjct 6771 GATCAGACGGACAGAGGTCTGGATCTCTCGGG 6740 >seq15 Length=382520 Score = 105 bits (116), Expect = 1e-16 Identities = 90/111 (81%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 2035651 CCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAACCTTA 2035710 |||||||||||||||||||||| || || || | || ||||| || || |||||| | | Sbjct 152840 CCAACTACCTCGACATCAAGCCTCTTCTTGACGTCGGTTGCAAAACTGTTGCCAACATGA 152781 Query 2035711 TCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATCAAGTACG 2035761 ||||||||||||| ||||| || |||||||| || || ||||| | | ||| Sbjct 152780 TCAAGGGCAAGTCTCCCGAAGAGATCCGCAAAACTTTCAACATTACGAACG 152730 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916157577241565