Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20fujikuroi_20[genbank_20GCA_5F001023045.1_202015-06-09] 835 sequences; 43,096,072 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq274 100 2e-15 seq344 95.1 9e-14 >seq274 Length=58898 Score = 100 bits (110), Expect = 2e-15 Identities = 281/429 (66%), Gaps = 3/429 (1%) Strand=Plus/Plus Query 281380 ATTAGTAATAGTAATATTCTTGGATTTGTTTGTTGATTTATCAGCGGCAGTCACATTAAG 281439 ||||||||| ||| || ||||| ||| || || || |||||| ||||| | Sbjct 47350 ATTAGTAATGACAATCTTGTTGGACTTGCCGGTACCCTTCTCGACGGCAGAGACATTCAT 47409 Query 281440 AATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGG 281499 ||||| |||||||| | || || ||||| || || ||||| || || | ||||||| Sbjct 47410 GATACCGTTGGCATCAAGGTCGAAGGTGACCTCGATCTGAGGAACACCGCGGGGAGCAGG 47469 Query 281500 TGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTC 281559 ||||| || | | || | |||| || || || || ||| | || || Sbjct 47470 GGGGATACCAGTGAGCTCGAACTTGCCCATGAGGTTGTTGTCCTTGGTGCGCTGACGCTC 47529 Query 281560 ACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTCT 281619 ||||||| | | |||||| ||| ||| || || || || | || | || || Sbjct 47530 ACCCTCGTAGACCTGGATAAGAACACCAGGCTGGTTGTCGGAGAAGGTGGAGAAGACCTC 47589 Query 281620 GGATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCAGC 281679 ||| || || ||| || || ||||| | |||| |||||||| ||||||||||| Sbjct 47590 GGACTTCTTGGTAGGGATGGTGGTGTTGCGGGGGATAAGCTTGGTCATCATACCACCAGC 47649 Query 281680 TGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATAT--TTTGAAGTTTT 281737 || || | ||| ||||| || || | ||||||| || | || | || | | || Sbjct 47650 AGTCTCGATACCGAGAGAGAGGGGGGCAACATCAAGAAGCAGGATCTCGTTGGTGGCCTT 47709 Query 281738 TCATCA-GTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTC 281796 | | || | |||| ||||| || || || | ||| ||||| || |||||||| || Sbjct 47710 GCTGGAGGTGTCACCAGAGAGAATCGCGGCCTGGACAGCGGCACCGTAGGCAACAGCCTC 47769 Query 281797 ATCAGGATT 281805 ||| || || Sbjct 47770 ATCGGGGTT 47778 >seq344 Length=482239 Score = 95.1 bits (104), Expect = 9e-14 Identities = 94/122 (77%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 432288 GGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAGCGTGTCGATATGTCTGCACGT 432347 ||||| || |||||| || | || || |||||||| ||||||||||| | || |||||| Sbjct 444011 GGTAAGGAGGGTCGTCTTCGTGGTAACTTGATGGGCAAGCGTGTCGACTTTTCGGCACGT 444070 Query 432348 ACAGTTATTACTTCTGATCCTAATATTGCTCTCAATGAAGTTGGTGTTCCTCTCATTATT 432407 || || |||||| |||| | || || |||| | || |||||||| |||| || |||| Sbjct 444071 ACTGTCATTACTGGTGATGCCAACCTTTCTCTACACGAGGTTGGTGTCCCTCGCAGTATT 444130 Query 432408 GC 432409 || Sbjct 444131 GC 444132 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740589405028710