Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20fujikuroi_20[genbank_20GCA_5F001023045.1_202015-06-09] 835 sequences; 43,096,072 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq705 208 7e-49 seq443 136 4e-27 seq68 132 5e-26 >seq705 Length=184299 Score = 208 bits (230), Expect = 7e-49 Identities = 1000/1568 (64%), Gaps = 45/1568 (3%) Strand=Plus/Minus Query 148233 TCGATCAGGTCATCGATCAGATACTGATTCACCACCTGAAACTCGCCGGCGAGCACGCGC 148292 |||| ||||| | || ||| | | || || ||||||||||| || ||||| || || Sbjct 122722 TCGACAAGGTCCTTGAGCAGCCAGGGGTTAACAACCTGAAACTCACCAGCGAGAACACGG 122663 Query 148293 CGCAGATACACGTTGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTGCGCG 148352 || | || | ||| || | || || || ||||||||||||||| |||||| | | Sbjct 122662 CGTTGGTAGATATTGGAGGTGTAGGGCTCGAAGCACTCGTTGTTGCCCAGAATCTGGGAG 122603 Query 148353 GTCGTTGCCGTGGGCATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTTTATT 148412 || | || || ||||| || | || || |||||| | ||| | | | || Sbjct 122602 GTACTGGCAGTAGGCATAGGAGCAAGGAGTAGACTGTTGCGGATGCCGTG-TGTCTTGAC 122544 Query 148413 TTGCGCT-TCAGAGCCGCCCAGTCCCAGAGCGGCGACGGTGTCACGTTCCACATGTCGTA 148471 || | || |||| | ||||||||||||| || || | ||||||||||||||| | Sbjct 122543 TTCCTCTCGAAGAGTCTCCCAGTCCCAGAGGTCAGAGGGCTTGACGTTCCACATGTCGAA 122484 Query 148472 CTGCAGAATGCCGCGGCTAGCGGGGCTGCCCTCGTACGAGCTGTACGGTCCGTGCGCCGC 148531 ||| ||||| || |||||| |||| | | | | ||| || || | || Sbjct 122483 CTGGAGAATACCCTCAGAGGCGGGGGAACCCTTGAAGGTGGAGTAGGGACCCTCTTCCTT 122424 Query 148532 CGCCAGTTCGCA-GCTCGCCTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGCCTGT 148590 ||||| | ||| | || ||||| ||| ||||| ||||| ||| ||| | | Sbjct 122423 AGCCAGCT-GCACGGAGGCAGTCAGCGCAGCGTGATAAATGGTCTCAAAAATCTGCTTAT 122365 Query 148591 TGAGC---AGCGCCGCCGACTCGCTTTCGTACGGCATACGCAGCCGCACAAACGCGTCGG 148647 ||||| | ||| | | | ||| | ||||| ||||| | || || |||| Sbjct 122364 TGAGCTCACGAGCCTCGG---GGGACTCGAAGGGCATGCGCAGAGCAAGGAAAGCATCGG 122308 Query 148648 CAAGGCCCTGTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGCTCT 148707 |||| ||||| || || | |||||||| ||||| ||||| | ||| || || Sbjct 122307 CAAGACCCTGAACACCAAGACCAATGGGTCGGTGGCGCATGTTACTGTTGCGAGCCTCCT 122248 Query 148708 CGAGCGGATAGTGGTTGCGGTCGATGATCTTGTCAAGATTGCGCACCACCACCTTTGTAA 148767 || || |||||||| ||||||||||||| || ||||| | || |||| | | Sbjct 122247 GGACAGGGTAGTGGTTCACATCGATGATCTTGTTCAGGTTGCGAATAACAACCTGACTGA 122188 Query 148768 TTCTGCGCAGCAATTCAAAATCGTA-CTTG--TCATC-TA--CGATGCATCGGTTCACGG 148821 || ||||| | || ||||| | | ||||| || |||| | | || | Sbjct 122187 CCTTGTGCAGCTTCTTGAAGTCGTAGCAAGCCTCATCGTAGTTGATGAAGGAGGGCAGAG 122128 Query 148822 CGATAGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTACGATCTCGG 148881 | |||||| || ||||| ||||| ||| || ||||| | |||||| | || || | Sbjct 122127 ATAGAGAGGCAAGGTTGCAGACGGCGACCTCGTCAGGGGCACAGTACTCGATAATTTCAG 122068 Query 148882 CGCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGCTGTTGCACG 148941 ||| |||||| || | ||| || | ||||||||| || ||||||| |||||| | Sbjct 122067 TGCAAAGATTGGAGCTTCGGATGGTACCGAGGTTCTTTTGGTTACTCTTGCGGTTGCAGG 122008 Query 148942 CGTCCTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTCCACTAT---GAACC 148998 | || ||||| |||||| | || || || || ||| | || | || | ||| Sbjct 122007 CATCTTTGTAGAGCATGAATGGGTTTCCGGTCTCAGTCTGGGCCTCAAGAATGGCGTACC 121948 Query 148999 GATGCAGGTCCTGCGCGCGCACTTGCTGCTCGTAGCGACCCT------CCTGCTCGTA-- 149050 | || | ||| || |||| | || | |||||||| ||| |||||| Sbjct 121947 AA---AGCTTCTGAGC-----CTTGATCGTC-TTGCGACCCTTGCCCGCCTTCTCGTACT 121897 Query 149051 TAAAGTATACAGCCGCTCGAACGCCTCGCCGTAGCAATCGTCGAGACCGGGGCACTTGTG 149110 | ||| | ||| ||||||| |||| |||||||| ||| |||| || ||||||| || Sbjct 121896 TTTCGTACAGAGC--CTCGAACTCCTCTCCGTAGCAGTCGGCGAGGCCAGGGCACTCGTT 121839 Query 149111 CGGGCACATGAGCGACCACACGCCGTCCGCGTACACGCGCTTCATAAACAGATCGGGCAC 149170 |||||||| || | ||| | |||| | | || ||||||||||| ||||| || | Sbjct 121838 GGGGCACATAAGTGTCCAGTCACCGTTCTTTTCAACACGCTTCATAAAAAGATCAGGGAT 121779 Query 149171 CCAGAGCGCGTACATGAGGTCGCGCGCCTTGCAGTCTTCGGCGCCCATGTTGCGGCGCAG 149230 ||| || || | ||||| || || | || || || ||| || || Sbjct 121778 CCAAAGGGCAAGGAAAAGGTCACGGGCACGGACCTCCTCCTTACCGTGGTTCTTACGGAG 121719 Query 149231 GTTGAGCACGCTGAATATGTCCGCGTGCCACGGCTCAATGTACACCGCGAGCGCGCCCTT 149290 | || | ||| | || | |||||| ||||| | ||| | || | || || Sbjct 121718 ATCAAGGAACTCGAAGACATCAGAGTGCCAAGGCTCGAGGTAGATGGCAAAAGCACCGGG 121659 Query 149291 GCGC---TTGCCGCCCTGGTCGACGTGGCGCACCATGTTGTTAAACACTCGAACCATAGG 149347 ||| ||||| ||||||||||| | || | ||||||| || || |||| |||||| Sbjct 121658 TCGCTTGTTGCCACCCTGGTCGACATACCGAGCAGTGTTGTTGAAGACACGAAGCATAGG 121599 Query 149348 TTCAATGCCACTGGCAGTGCCGTTAGTAGAGCTAATGCGACTGCCGCGCGCTCGCACTTT 149407 | | || | | || ||||| ||| | ||| ||| || || | Sbjct 121598 AACGACACCGTTCGATGTACCGTTGGTACCGGCGATGTATGAGCCAGTAGCACGGATACG 121539 Query 149408 GTGCACGTTGACGCCGATGCCGCC-GCCGTACTTTGAGATGGCCGCGCAGTCGCCGAGCG 149466 |||||| || | || || || || ||| | ||| ||||| || ||| ||| | Sbjct 121538 GTGCACATTCAGACCAATACCACCAGCCAT-CTTGGAGATCATGGCACAGGTCTTGAGAG 121480 Query 149467 TCGAGTAGATGCCCTCGATGCTGTCGCGCTTCATGGTCAGCAGAAAGCACGAGCACATTT 149526 | |||||| ||||| || |||||| |||||| | || ||||| || ||| || Sbjct 121479 TATCGTAGATTCCCTCAATACTGTCGTCCTTCATATCAACCAAGAAGCAAGATGACAATT 121420 Query 149527 GCGGAAAACGCGTGCCGGCCGCGAACATGGTGGGGCTGGCGTGTGT-AAAATATTTCTGG 149585 | || | | |||||||| ||| | |||||| || || || || | || || | Sbjct 121419 GGGGCTGAGGGGTGCCGGCATTGAAGAGCGTGGGGGAAGCATGCGTGAAGAACTTGCTTG 121360 Query 149586 CTCATCATCTCGTACGACTCGAGCACGCGGTCCATGTCATCGCCATGGATGCCTATGGCG 149645 ||||| | ||| | ||| | || || || || ||||| || ||| || | | Sbjct 121359 -ACATCAGGTTGTATGTCTCCAAGACTCGCTCGATATCATCACCCCAGATACCAACAGAC 121301 Query 149646 ACGCGCATCAGCATATGCTGCGGTCGCTCCGCCACTTTGTTTCCAATTTTGAGCAAGTAG 149705 || ||||| | ||| ||||| || ||||| | | || |||| ||||| | ||| Sbjct 121300 ACACGCATGATCATGTGCTGTGGGCGCTCGACAATCTTACCGTCAATCTTGAGGAGGTAT 121241 Query 149706 CCGTTTTCTAGTGTCTTGTAGCCAAAGTACTTGTAGTCAAAGTCGCGGCCGTGGTCAATG 149765 || | |||||| |||||||||| | ||| | || |||||| | | | ||||| Sbjct 121240 GATCGCTCCAAAGTCTTGAAGCCAAAGTATTGGTATTGGAAATCGCGGTCATAGACAATG 121181 Query 149766 GCGGCGTC 149773 || | ||| Sbjct 121180 GCAGAGTC 121173 >seq443 Length=545840 Score = 136 bits (150), Expect = 4e-27 Identities = 151/199 (76%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||||||||| ||||| || ||||| |||| || ||| | | | |||||||||||||||| Sbjct 425354 GGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCA-TCCTCGAGCTGCTTGC 425412 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | || | || || ||||||||||| || |||||||| |||||||| |||||| || Sbjct 425413 CAGCAAAGATCAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACT 425472 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 ||| | || | ||||||| | |||||| || | ||||| || || || || || | Sbjct 425473 TGACGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTCCCCGTGAGGG 425532 Query 133642 TTTTTACGAAAATCTGCAT 133660 | || |||||||||||||| Sbjct 425533 TCTTGACGAAAATCTGCAT 425551 >seq68 Length=53621 Score = 132 bits (146), Expect = 5e-26 Identities = 148/198 (75%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 |||||||| ||||| || |||||||| | ||| |||||| ||||||||||| Sbjct 47792 GTGGACTCCTTCTGAATGTTGTAATCAGAGAGAGTGCGGCCGTCCTCAAGCTGCTTGCCG 47851 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583 ||| |||| | || ||||||||||| |||||||| |||||||| ||||| |||| Sbjct 47852 GCGAAAATCAAGCGTTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGAATCTTGGACTTG 47911 Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643 | | || | ||||| | | ||| || |||| ||||| ||| ||||||||||| || Sbjct 47912 ACGTTGTCGATAGTGTCAGAAGACTCAACCTCGAGGGTGATGGTCTTGCCGGTCAGGGTC 47971 Query 133644 TTTACGAAAATCTGCATG 133661 || ||||| ||||||||| Sbjct 47972 TTGACGAAGATCTGCATG 47989 Score = 87.8 bits (96), Expect = 2e-12 Identities = 138/196 (70%), Gaps = 4/196 (2%) Strand=Plus/Plus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGT--GGACGAGTCCTCGAGC 133514 ||| | ||| || || ||||| || ||||| ||| | | || || || || || || Sbjct 47503 ATGAAGGGTAGATTCCTTCTGGATGTTGTAGTCGGCAAGGGTTCGGCCG--TCTTCCAGT 47560 Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574 ||||| || || |||| || ||||||||||| |||||||| || |||||||| |||| Sbjct 47561 TGCTTTCCAGCAAAAATCAGACGCTGCTGGTCAGGAGGGATACCCTCCTTGTCCTGGATC 47620 Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634 || ||| | | || | || |||| | ||| || |||| |||| ||| ||||| Sbjct 47621 TTCGACTTAACATTGTCGATGGTATCGGACGACTCGACCTCGAGAGTGATGGTCTTGCCA 47680 Query 133635 GTCAGAGTTTTTACGA 133650 || || || || |||| Sbjct 47681 GTGAGGGTCTTGACGA 47696 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483415754295400