Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20fujikuroi_20[genbank_20GCA_5F001023045.1_202015-06-09] 835 sequences; 43,096,072 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq68 95.1 1e-14 >seq68 Length=53621 Score = 95.1 bits (104), Expect = 1e-14 Identities = 142/204 (70%), Gaps = 6/204 (3%) Strand=Plus/Plus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCAT------GTTGCGCTCGTCTTCGAGCTGT 27104 || || || || || || ||||||||| | |||| | ||||| | ||| Sbjct 47048 GTTGACTCCTTCTGGATGTTGTAGTCGNNNNNNNNNNAGGTGCGACCATCTTCCAACTGC 47107 Query 27105 TTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTG 27164 ||||| ||| | || |||||||| ||||| || || | |||||| ||||| |||||| Sbjct 47108 TTACCAGCGAAGATAAGACGCTGCTGATCAGGGGGGATACCCTCCTTATCCTGAATCTTG 47167 Query 27165 TTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTC 27224 | |||| | | || | |||||| | | ||||| || ||||| || | || || ||| Sbjct 47168 CTCTTCACGTTGTCGATAGTGTCACTAGACTCAACCTCAAGAGTGATGGTCTTTCCAGTC 47227 Query 27225 AGAGTTTTCACAAAGATTTGCATA 27248 ||||| ||||| || || |||||| Sbjct 47228 AGAGTCTTCACGAAAATCTGCATA 47251 Score = 86.0 bits (94), Expect = 5e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 ||||| || | ||||| || || || || ||||||||| | | || | || || Sbjct 47270 ACCAAGTGGAGAGTAGATTCCTTCTGGATGTTGTAGTCGGAAAGAGTTCGGCCATCCTCA 47329 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 || || || || || | ||||| |||||||||||||| || | |||||| || || | Sbjct 47330 AGTTGCTTGCCAGCAAAGATGAGTCGCTGTTGATCCGGAGGAATACCCTCCTTGTCCTGG 47389 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 |||||| | |||| | || | || || | | || ||||| ||||| || | || Sbjct 47390 ATCTTGCTCTTCACATTATCAATGGTATCGGATGACTCGACTTCCAGAGTAATGGTCTTT 47449 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || || || || || || |||||||||||| Sbjct 47450 CCAGTAAGGGTCTTGACGAAGATTTGCATA 47479 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424930075628520