Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20fujikuroi_20[genbank_20GCA_5F001023045.1_202015-06-09] 835 sequences; 43,096,072 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq68 100 2e-16 >seq68 Length=53621 Score = 100 bits (110), Expect = 2e-16 Identities = 108/143 (76%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || | |||||| | |||||| |||||||| ||||| || ||||| || || ||| Sbjct 47252 CCACCACGAAGACGGAGCACCAAGTGGAGAGTAGATTCCTTCTGGATGTTGTAGTCGGAA 47311 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || ||||| | || |||||||| || || ||||| || | |||||||| ||||| || Sbjct 47312 AGAGTTCGGCCATCCTCAAGTTGCTTGCCAGCAAAGATGAGTCGCTGTTGATCCGGAGGA 47371 Query 34600 ACTCCCTCCTTGTCTGTGATCTT 34622 | ||||||||||| |||||| Sbjct 47372 ATACCCTCCTTGTCCTGGATCTT 47394 Score = 86.0 bits (94), Expect = 4e-12 Identities = 146/209 (70%), Gaps = 2/209 (1%) Strand=Plus/Plus Query 34503 ATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTG 34562 ||| |||||| |||||| |||||||| ||||| || || || || |||| ||||| || Sbjct 47785 ATGAAGAGTGGACTCCTTCTGAATGTTGTAATCAGAGAGAGTGCGGCCGTCCTCAAGCTG 47844 Query 34563 TTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTT 34622 || ||||| || || || || || ||||| || || | ||||||||||| ||| | Sbjct 47845 CTTGCCGGCGAAAATCAAGCGTTGCTGGTCGGGGGGGATGCCCTCCTTGTC-CTGAATCT 47903 Query 34623 TTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGG 34681 | | || ||| | || ||||| ||| || || | ||| || || || |||| Sbjct 47904 TGGACTTGACGTTGTCGATAGTGTCAGAAGACTCAACCTCGAGGGTGATGGTCTTGCCGG 47963 Query 34682 TTAACGTTTTCACAAAAATCTGCATGTTG 34710 | | || || || || ||||||||| || Sbjct 47964 TCAGGGTCTTGACGAAGATCTGCATGATG 47992 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314726397134555