Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20fujikuroi_20[genbank_20GCA_5F001023045.1_202015-06-09] 835 sequences; 43,096,072 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq443 134 1e-26 seq68 125 5e-24 seq92 95.1 9e-15 >seq443 Length=545840 Score = 134 bits (148), Expect = 1e-26 Identities = 155/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||||||| || ||| |||||| ||||||||||| ||| || ||| | || || Sbjct 425343 ACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCG 425402 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| || |||||||||| |||||||| || | || | || ||||| ||| Sbjct 425403 AGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGG 425462 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 ||||| ||| | | | |||||||||| || |||||||| | || |||||||| Sbjct 425463 ATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTC 425522 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||||||||||||| ||||| || ||||| Sbjct 425523 CCCGTGAGGGTCTTGACGAAAATCTGCAT 425551 >seq68 Length=53621 Score = 125 bits (138), Expect = 5e-24 Identities = 156/212 (74%), Gaps = 4/212 (2%) Strand=Plus/Plus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGG--CGAGTTGGCGCTCGTCG 44185 ||||| ||| || || ||||| ||||||||||| |||| ||||| || | || Sbjct 47269 CACCAAGTGGAGAGTAGATTCCTTCTGGATGTTGTAGTCGGAAAGAGTT--CGGCCATCC 47326 Query 44186 TCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCC 44245 || || ||||| || |||||||| | ||||| ||||| | ||| | ||| ||||| ||| Sbjct 47327 TCAAGTTGCTTGCCAGCAAAGATGAGTCGCTGTTGATCCGGAGGAATACCCTCCTTGTCC 47386 Query 44246 GTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTC 44305 ||||| ||||| | | ||||| |||| || || || |||| ||||| ||| Sbjct 47387 TGGATCTTGCTCTTCACATTATCAATGGTATCGGATGACTCGACTTCCAGAGTAATGGTC 47446 Query 44306 TTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||| || |||||||| |||||||||||||| Sbjct 47447 TTTCCAGTAAGGGTCTTGACGAAGATTTGCAT 47478 Score = 118 bits (130), Expect = 8e-22 Identities = 148/201 (74%), Gaps = 4/201 (2%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || || ||||| || ||||| ||||||||||| ||||| || || |||| ||| Sbjct 47498 ACGAGATGAAGGGTAGATTCCTTCTGGATGTTGTAGTCGGCAAGGGTTCGGCCGTCTTCC 47557 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 || ||||| || ||||| |||| ||||||||| || | ||| | ||| ||||| ||| Sbjct 47558 AGTTGCTTTCCAGCAAAAATCAGACGCTGCTGGTCAGGAGGGATACCCTCCTTGTCCTGG 47617 Query 44249 ATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306 |||||| ||| || ||| | ||||| |||| || || ||||| | || || |||| Sbjct 47618 ATCTTCGACTTAACATTGT--CGATGGTATCGGACGACTCGACCTCGAGAGTGATGGTCT 47675 Query 44307 TTCCCGTGAGGGTCTTCACGA 44327 | || ||||||||||| |||| Sbjct 47676 TGCCAGTGAGGGTCTTGACGA 47696 Score = 118 bits (130), Expect = 8e-22 Identities = 154/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || || ||||| ||| |||||| || ||||||||||| | ||| ||| |||| || Sbjct 47780 ACAAGATGAAGAGTGGACTCCTTCTGAATGTTGTAATCAGAGAGAGTGCGGCCGTCCTCA 47839 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| ||||| || ||||| || ||||| || | || | || ||||| ||| Sbjct 47840 AGCTGCTTGCCGGCGAAAATCAAGCGTTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGA 47899 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 ||||| ||| | | | || ||||| | || || ||||| | || || ||||| Sbjct 47900 ATCTTGGACTTGACGTTGTCGATAGTGTCAGAAGACTCAACCTCGAGGGTGATGGTCTTG 47959 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCATGATG 44341 || || |||||||| |||||||| ||||||||| Sbjct 47960 CCGGTCAGGGTCTTGACGAAGATCTGCATGATG 47992 Score = 93.3 bits (102), Expect = 3e-14 Identities = 150/216 (69%), Gaps = 8/216 (4%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG-------AGTTGGCGCTC 44181 || ||||| || || |||||| ||||||||||| ||| || || || | Sbjct 47036 ACGAGGTGGAGAGTTGACTCCTTCTGGATGTTGTAGTCGNNNNNNNNNNAGGTG-CGACC 47094 Query 44182 GTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTT 44241 || |||| |||||| || || ||||| | |||||||||||| | || | ||| ||||| Sbjct 47095 ATCTTCCAACTGCTTACCAGCGAAGATAAGACGCTGCTGATCAGGGGGGATACCCTCCTT 47154 Query 44242 TTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAAT 44301 ||| ||||| ||||| | | || ||||| || || ||||| | || || Sbjct 47155 ATCCTGAATCTTGCTCTTCACGTTGTCGATAGTGTCACTAGACTCAACCTCAAGAGTGAT 47214 Query 44302 CGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||||||| || || ||||||||||| || ||||| Sbjct 47215 GGTCTTTCCAGTCAGAGTCTTCACGAAAATCTGCAT 47250 >seq92 Length=291394 Score = 95.1 bits (104), Expect = 9e-15 Identities = 132/183 (72%), Gaps = 4/183 (2%) Strand=Plus/Plus Query 44148 CCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGA 44207 |||| ||||||||||| |||| ||| || | || || || ||||| || || |||| Sbjct 166034 CCTTCTGGATGTTGTAGTCGGAGAGAGTTCGGCCATCCTCGAGTTGCTTACCAGCGAAGA 166093 Query 44208 TCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGT 44265 ||| ||||| || || | || | || ||||| ||| ||||| ||| || ||| Sbjct 166094 TCAGTCGCTGTTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGT 166153 Query 44266 TCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325 | |||||||| | ||| || ||||| | || || ||||| ||||| ||||||||||| Sbjct 166154 --CGATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCAC 166211 Query 44326 GAA 44328 ||| Sbjct 166212 GAA 166214 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359986736535195