Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20fujikuroi_20[genbank_20GCA_5F001023045.1_202015-06-09] 835 sequences; 43,096,072 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq443 147 5e-30 seq68 143 6e-29 seq92 140 8e-28 >seq443 Length=545840 Score = 147 bits (162), Expect = 5e-30 Identities = 156/206 (76%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||| || || ||||| || || ||||||||||| |||||||| || ||| Sbjct 425548 CAGATTTTCGTCAAGACCCTCACGGGGAAGACGATCACCCTTGAGGTGGAGTCTTCCGAC 425489 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| |||||||| ||||| |||||||| || || ||||| || |||||||| Sbjct 425488 ACCATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCTGACCAGCAG 425429 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||| || || || |||||||| ||||| | || || ||| || ||| || Sbjct 425428 CGCCTGATCTTTGCTGGCAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTACAACATC 425369 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || || || || || Sbjct 425368 CAGAAGGAGTCCACCCTCCACCTGGT 425343 >seq68 Length=53621 Score = 143 bits (158), Expect = 6e-29 Identities = 156/207 (75%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || || || || || || |||||||||||||| || || ||| Sbjct 47985 CAGATCTTCGTCAAGACCCTGACCGGCAAGACCATCACCCTCGAGGTTGAGTCTTCTGAC 47926 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| |||||||| |||||||||||||| || || ||||| || ||||||||| Sbjct 47925 ACTATCGACAACGTCAAGTCCAAGATTCAGGACAAGGAGGGCATCCCCCCCGACCAGCAA 47866 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | || |||||||| || ||||| || || || | ||||| | ||||| ||| | Sbjct 47865 CGCTTGATTTTCGCCGGCAAGCAGCTTGAGGACGGCCGCACTCTCTCTGATTACAACATT 47806 Query 178104 CAAAAAGAATCAACACTGCATCTTGTT 178130 || || || || || || ||||||||| Sbjct 47805 CAGAAGGAGTCCACTCTTCATCTTGTT 47779 Score = 113 bits (124), Expect = 1e-19 Identities = 118/155 (76%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || ||||||||||| ||||| || ||||| || ||||| || ||||| || ||| Sbjct 47247 CAGATTTTCGTGAAGACTCTGACTGGAAAGACCATCACTCTTGAGGTTGAGTCTAGTGAC 47188 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| ||||| || ||||||||||| || || || ||||| || || ||||| Sbjct 47187 ACTATCGACAACGTGAAGAGCAAGATTCAGGATAAGGAGGGTATCCCCCCTGATCAGCAG 47128 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGG 178078 || ||||||||||| || || ||| | |||||||| Sbjct 47127 CGTCTTATCTTCGCTGGTAAGCAGTTGGAAGATGG 47093 >seq92 Length=291394 Score = 140 bits (154), Expect = 8e-28 Identities = 139/180 (77%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 177929 TTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCAT 177988 ||||||||| || || || || || || |||||||||||||| || ||| |||||||| Sbjct 166215 TTTCGTGAAGACCCTGACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTCGGACACCAT 166156 Query 177989 CGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACT 178048 ||| || ||||| ||||| |||||||| || || || || |||||||| || ||||| Sbjct 166155 CGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAACAGCGACT 166096 Query 178049 TATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAA 178108 |||||||| || || || ||||| ||||| | ||||| |||| || ||| |||| || Sbjct 166095 GATCTTCGCTGGTAAGCAACTCGAGGATGGCCGAACTCTCTCCGACTACAACATCCAGAA 166036 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203718321956990