Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20fujikuroi_20[genbank_20GCA_5F001023065.1_202015-06-09] 2,959 sequences; 43,499,819 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq362 168 1e-36 seq2917 91.5 3e-13 >seq362 Length=14512 Score = 168 bits (186), Expect = 1e-36 Identities = 307/445 (69%), Gaps = 17/445 (4%) Strand=Plus/Plus Query 101918 GTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGG 101977 ||||| || ||||| ||||| || |||||||| |||||||| ||||| |||||||||||| Sbjct 11775 GTTGCTTTCGCTGCCGTTGAGGGTATCTTCTTCAGTGGTGCCTTCGCCTCCATTTTCTGG 11834 Query 101978 ATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGAC 102037 ||||||| | ||| | |||||||||| |||| ||| || ||| |||| ||| | ||| Sbjct 11835 CTCAAGAAGCGTGGTCTCATGCCTGGTCTGACCTTCTCTAACGAGCTCATCTCTCGTGAC 11894 Query 102038 GAAGGTCTTCATCGCGACTTTGCATGCATGCT----GTTGA--AAAAGGGTTTTGTTGAT 102091 || |||||||| |||||||| ||| | || | | |||||| || Sbjct 11895 GAGGGTCTTCACACTGACTTTGCCTGCCTCCTCCACTCTCACCTAAAGGGCCGTG----- 11949 Query 102092 ACCCCATCAAGAGAAAGGATTCTTGAAATTGTCACTGAAGCCGTCCGAATTGAACAAGAA 102151 ||| |||| | | ||||| || || ||||||| |||||| |||||||| || Sbjct 11950 ---CCAGCAAG-CAGATGATTCAAGATATCATCACTGATGCCGTCACCATTGAACAGGAG 12005 Query 102152 TTTCTCACAGTTTC-CCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAGCCA 102210 || ||||| | | | | ||||| || | || ||||||| | | |||| || Sbjct 12006 TTCCTCACTGAGGCTCTTCCCTGTGCCCTT-CTCGGCATGAACTCTGACCTCATGAAGCA 12064 Query 102211 GTACATTGAATTTGTGGCAGATAAACTATTGGTTGAAATGGGACTAGAAAAGCACTATAA 102270 ||||||||| || || || ||| || | || | | || || ||| ||| || Sbjct 12065 GTACATTGAGTTCGTCGCTGATCGTCTCCTTGTCGCTCTTGGCAACGAGAAGGTCTACAA 12124 Query 102271 TGTTACCAACCCCTTCCCATTCATGGACAATATTTCCCTCGAGAATAAGACCAACTTTTT 102330 | |||||||||||| |||||||| || || ||||| | ||||||||||| || Sbjct 12125 GGCCACCAACCCCTTCGACTTCATGGAAAACATCTCCCTTGGCGGCAAGACCAACTTCTT 12184 Query 102331 TGAAAAGAGAGTCGCCGAGTATCAA 102355 || ||| | || ||||| || ||| Sbjct 12185 CGAGAAGCGTGTTGCCGACTACCAA 12209 >seq2917 Length=53793 Score = 91.5 bits (100), Expect = 3e-13 Identities = 175/253 (69%), Gaps = 4/253 (2%) Strand=Plus/Minus Query 94792 CCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTATCATAAATACCCTCAATG 94851 || ||||| |||||||||| || || ||| |||||||| || || |||||||| Sbjct 46582 CCACCAGCCATCTTGGAGATCATGGCACAGGTCTTGAGAGTATCGTAGATTCCCTCAATA 46523 Query 94852 CTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGGGGTGTGACTGTT-CCACA 94910 || || || | | | | | |||||| || || | |||||| ||| | | || Sbjct 46522 CTGTCGTCCTTCATATCAACCAAGAAGCAAGATGACAATTGGGGC-TGAGGGGTGCCGGC 46464 Query 94911 ATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGATCATATGTTTC 94970 ||| || || |||||||||||||| || || | | || ||||| || | ||||| || Sbjct 46463 ATTGAAGAGCGTGGGGGAAGCATGCGTGAAGAACTTGCTTGACATCAGGTTGTATGTCTC 46404 Query 94971 AATGACAGATTTGATGTC-TGATCCGTGAATGCCGACAGCCACACGCATAATCATGTCCT 95029 | ||| | ||| || | | || | || || |||| ||||||||| ||||||| || Sbjct 46403 CAAGACTCGCTCGATATCATCACCCCAG-ATACCAACAGACACACGCATGATCATGTGCT 46345 Query 95030 GAGGGCGCTCAAC 95042 | |||||||| || Sbjct 46344 GTGGGCGCTCGAC 46332 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989546482705845