Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20fujikuroi_20[genbank_20GCA_5F001023065.1_202015-06-09] 2,959 sequences; 43,499,819 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq2917 372 8e-98 >seq2917 Length=53793 Score = 372 bits (412), Expect = 8e-98 Identities = 1121/1700 (66%), Gaps = 48/1700 (3%) Strand=Plus/Plus Query 363400 AAGACGATGGAGAAATCCTACCTATCTCGT-ATCAATGGTGATATTGTTGAACGCCCGCA 363458 ||||| ||||| ||| ||||| ||| || | ||| | ||||| || ||||| || Sbjct 46287 AAGACTTTGGAGCGATCATACCTC-CTCAAGATTGACGGTAAGATTGTCGAGCGCCCACA 46345 Query 363459 GCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATGCCG--CGATT 363516 ||| ||| | |||||||| || |||||||| || || || |||| || ||| | Sbjct 46346 GCACATGATCATGCGTGTGTCTGTTGGTATC---TG---GGGTGATGATATCGAGCGAGT 46399 Query 363517 ----GAAACATATAAGCT--TCTAAGTGCTCGTGTATTCACGCACGCCACGCCAACAATG 363570 || ||||| || || | | | || || | |||||||| || | || || | Sbjct 46400 CTTGGAGACATACAACCTGATGTCAA-GCAAGT-TCTTCACGCATGCTTCCCCCACGCTC 46457 Query 363571 TACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAGGAC 363630 | |||||| || || | | | || || |||| |||||||| | | | ||||||||| Sbjct 46458 TTCAATGCCGGCACCCCTCAGCCCCAATTGTCATCTTGCTTCTTGGTTGATATGAAGGAC 46517 Query 363631 GATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAATGCA 363690 || || ||||| |||| || || || |||| ||||| | || ||||||| || Sbjct 46518 GACAGTATTGAGGGAATCTACGATACTCTCAAGACCTGTGCCATGATCTCCAAGATGGCT 46577 Query 363691 GGCGGAATTGGTGTATCGATCCACAATGTTCGTGC-ACAGAACAGTTACATTCGCGGCAC 363749 || || |||||| | | ||| | | ||||| || | | ||||| ||| || Sbjct 46578 GGTGGTATTGGTCTGAATGTGCACCGTATCCGTGCTACTGG-CTCATACATCGCCGGTAC 46636 Query 363750 AGGGGGATAC-TCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAGGT 363808 || ||| ||||| || | ||||| ||||||||||| || |||| ||||| ||| Sbjct 46637 CAACGG-TACATCGAACGGTGTCGTTCCTATGCTTCGTGTCTTCAACAACACTGCTCGGT 46695 Query 363809 ACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCATC 363868 | |||||||||||||| ||||| || || ||||| || || ||||||||| | Sbjct 46696 ATGTCGACCAGGGTGGCAACAAGCGACCCGGTGCTTTTGCCATCTACCTCGAGCCTTGGC 46755 Query 363869 ATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGCGTG 363928 | | ||| | || ||||| ||||| ||||| || ||| || || ||||| | |||| Sbjct 46756 ACTCTGATGTCTTCGAGTTCCTTGATCTCCGTAAGAACCACGGTAAGGAGGAGGTCCGTG 46815 Query 363929 CACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAGGCAG 363988 | ||||| || ||| ||| |||||| | |||| | |||||||||||| || || | Sbjct 46816 CCCGTGACCTTTTCCTTGCCCTTTGGATCCCTGATCTTTTTATGAAGCGTGTTGA--AAA 46873 Query 363989 GTAAG--AATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTATGGGG 364046 | | | | ||| |||| | ||||| | || || || || || |||| | || Sbjct 46874 GAACGGTGACTGGACACTTATGTGCCCCAATGAGTGCCCTGGCCTCGCCGACTGCTACGG 46933 Query 364047 TGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAAGACAAT 364106 || || | | ||||| ||||||||||| || || ||| |||| ||| ||||| || Sbjct 46934 AGAGGAGTTCGAGGCTCTGTACGAAAAGTACGAGAAGGCGGGCAAGGGTCGCAAGACGAT 46993 Query 364107 TCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCCTA 364166 || |||||||| |||| ||||| | || | |||| |||||| |||| || | Sbjct 46994 CAAGGCTCAGAAGCTTTGGTACGCCATTCTTGAGGCCCAGACTGAGACCGGAAACCCATT 47053 Query 364167 TATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCA 364226 ||| | ||||||||| | |||||||||||| ||||| || |||| ||||| | || Sbjct 47054 CATGCTCTACAAAGATGCCTGCAACCGCAAGAGTAACCAAAAGAACCTCGGTACCA-TCC 47112 Query 364227 GCAG-AGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCCGTAT 364285 | || ||| || || || || ||||| || ||| || || |||||| ||||| | Sbjct 47113 GAAGCTCCAATCTTTGCACTGAAATTATCGAGTACTGTGCCCCTGACGAGGTCGCCGTCT 47172 Query 364286 GTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGTAA---AAGATGGTACT---TTTGACC 364339 | |||||||| || | | || || | || | | | |||| || | ||| Sbjct 47173 GCAACCTTGCCTCTCTATCTCTGCCCTCCTTCATCAACTACGATGAGGCTTGCTACGACT 47232 Query 364340 ACCAGCATCTTTATGACGTAACCTATCATGCTACTTGCAATCTCGACAAGGTTATCGACA 364399 | || | || | | || | | || || | |||| || ||||| | ||||| Sbjct 47233 TCAAGAAGCTGCACAAGGTCAGTCAGGTTGTTATTCGCAACCTGAACAAGATCATCGATG 47292 Query 364400 AGAATTATTATCCAATTCCTGAAGCCGAGC-GTTCTAATATGCGTCATCGCCCGATTGGT 364458 ||| | || || ||| | || | || ||| ||||| || || || |||||| Sbjct 47293 TGAACCACTA-CCCTGTCCAGGAGGCTCGCAACAGTAACATGCGCCACCGACCCATTGGT 47351 Query 364459 CTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTC--AAGATGGCATTTGATTCGC 364516 |||||||| ||||| || || || | ||| | ||||| ||| | || || || | Sbjct 47352 CTTGGTGTTCAGGGTCTTGCCGATGCTTTCCT--TGCTCTGCGCATGCCCTTCGAGTCCC 47409 Query 364517 CTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAATGACTG 364576 | || ||||||| || |||||| |||| ||||| || || ||| || || |||||| Sbjct 47410 CCGAGGCTCGTGAGCTCAATAAGCAGATTTTTGAGACCATTTATCACGCTGCGCTGACTG 47469 Query 364577 -CTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTACTTATGAGGGGTCCCCTCTT 364635 || |||| | |||| || |||| ||||| || | |||| ||||| Sbjct 47470 CCTCCGTG-CAGCTGGCTAAGGAAGAGGGTCCCTACTCCACCTTCAAGGGTTCCCCCGCC 47528 Query 364636 TCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCGATGGAACTGG 364695 || |||| | ||||||| || | ||||| |||| ||| |||| || ||| ||||| Sbjct 47529 TCTGAGGGTATTCTCCAGTTCGACATGTGGAACGTCAAGCCCTCTGACCTCTGGGACTGG 47588 Query 364696 GATACGCTACGTTCCAACGTTAAGAAGCATGGTACTCGCAAC--TC-CCTCGTTACAGCG 364752 || || || || | || |||| || || | |||||| || ||| || || Sbjct 47589 GAGACTCTTCGAGAGGAAGTCAAGACACACGGCATCCGCAACAGTCTACTCCTT---GCT 47645 Query 364753 CCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGAACCGTTT 364812 || ||||| || || ||| | ||||| || || ||||||||||||||||| || | Sbjct 47646 CCTATGCCTACTGCCAGTACCTCCCAGATTCTGGGCAACAACGAGTGCTTCGAGCCCTAC 47705 Query 364813 ACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATAAGTAC 364872 || |||| | || |||||| ||||| | || || || | ||| || || | Sbjct 47706 ACCTCCAATATCTACCAACGCCGTGTTCTCGCTGGTGAGTTCCAGGTTGTCAACCCCTGG 47765 Query 364873 CTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACTATATCATC 364932 || ||||||| ||| |||| || |||||| || ||||||||| ||||| Sbjct 47766 CTGCTCAAGGACCTTGTCGACATGGGTCTGTGGTCCGATGCTATGAAGAACCGCATCATT 47825 Query 364933 GCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCTGAAGCCTATTTAC 364992 || | ||||| || | ||||||||||| | || | ||| | ||| || | || Sbjct 47826 GCTGAGAATGGATCCATTCAGAACATTCCCAACATCCCTGCCGATGTCAAGGCTCTGTAT 47885 Query 364993 AAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGGCCGATCGCGGTGCT 365052 || || || ||||| || || ||| || | | ||||| || ||||| ||||| Sbjct 47886 AAGACTGTTTGGGAGATCTCTCAGCGCCAGGTCGTCCAGATGGCTGCTGATCGAGGTGCC 47945 Query 365053 TTTATCTGTCAGAGCCAGTC 365072 || || |||| |||||| Sbjct 47946 TTCATTGATCAGTCCCAGTC 47965 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303304187013938