Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20fujikuroi_20[genbank_20GCA_5F001023065.1_202015-06-09] 2,959 sequences; 43,499,819 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq338 91.5 1e-13 seq2084 86.0 5e-12 >seq338 Length=10966 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | || || || || | |||||||| | ||||| | ||||||||| | | Sbjct 6887 ATGCAAATCTTCGTCAAGACCCTTACTGGAAAGACCATTACTCTGGAAGTCGAGTCATCC 6946 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 || ||||| || | || || ||||| ||||| || || || ||||| |||||| Sbjct 6947 GATACCATTGATAATGTGAAGAGCAAGATCCAGGACAAGGAGGGTATTCCTCCGGATCAA 7006 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||| |||| || | | ||||||||||| || |||| | ||| | ||| || ||| Sbjct 7007 CAGCGACTCATCTTTGCTGGCAAGCAACTTGAGGATGGCCGAACTCTTTCCGACTACAAC 7066 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTG 24200 || || || |||||||| | || || ||| Sbjct 7067 ATCCAGAAGGAATCTACTCTCCACTTGGTG 7096 >seq2084 Length=14430 Score = 86.0 bits (94), Expect = 5e-12 Identities = 110/152 (72%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 24027 ATTACCATCGAAGTCGAGGCCAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGAC 24086 || ||| |||| |||||| || ||||||||||| | ||||| ||||| ||| Sbjct 5173 ATCACCCTCGAGGTCGAGTCCTCGGACACCATCGACAATGTCAAGTCCAAGATCCAGGAC 5114 Query 24087 AAAGAAGGCATACCTCCCGATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGAT 24146 || || ||||| || || || |||||| ||||||| | || || ||||||||||| ||| Sbjct 5113 AAGGAGGGCATTCCCCCGGACCAACAGCGACTGATCTTCGCTGGTAAGCAACTCGAGGAT 5054 Query 24147 GACAGAAACGTCAGCGATTATAACATTCAAAA 24178 | | ||| || ||| || ||||| || || Sbjct 5053 GGCCGAACTCTCTCCGACTACAACATCCAGAA 5022 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429920495298645