Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20fujikuroi_20[genbank_20GCA_5F001023065.1_202015-06-09] 2,959 sequences; 43,499,819 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq338 107 2e-18 >seq338 Length=10966 Score = 107 bits (118), Expect = 2e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || || ||||||| || || || || |||||||||||||| | || ||||| |||| Sbjct 6588 AGAACAAGATGAAGAGTGGACTCCTTCTGAATGTTGTAATCAGAGAGAGTGCGTCCGTCC 6529 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 ||||||||||||||||| |||| | || ||||||||||| || || || || || || Sbjct 6528 TCAAGCTGCTTGCCGGCGAAAATCAAGCGTTGCTGGTCGGGGGGGATGCCCTCCTTGTCC 6469 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || || || ||| || || | || || | || || || | || | |||| Sbjct 6468 TGAATCTTGGACTTGACGTTGTCGATAGTGTCGGAAGACTCAACCTCGAGGGTGATGGTC 6409 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 |||||||||| || || ||||| || ||||| Sbjct 6408 TTGCCGGTCAGGGTCTTGACGAAGATCTGCAT 6377 Score = 98.7 bits (108), Expect = 1e-15 Identities = 143/202 (71%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || || ||||||| || ||||| || || |||||||| || || | ||| || ||||| Sbjct 6870 AGGACGAGATGAAGGGTAGATTCCTTCTGGATGTTGTAGTCGGCAAGGGTTCGGCCGTCT 6811 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || || ||||| || ||| |||| || ||||||||||| ||||| || || || || || Sbjct 6810 TCCAGTTGCTTTCCAGCAAAAATCAGACGCTGCTGGTCAGGAGGGATACCCTCCTTGTCC 6751 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || || || ||| ||| || | ||||| | || || || | ||| | |||| Sbjct 6750 TGGATCTTCGACTTAACATTGTCGATGGTATCGGACGACTCGACCTCGAGAGTGATGGTC 6691 Query 64412 TTGCCGGTCAAAGTTTTTACGA 64433 ||||| || | || || |||| Sbjct 6690 TTGCCAGTGAGGGTCTTGACGA 6669 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499626319387960