Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20fujikuroi_20[genbank_20GCA_5F001023065.1_202015-06-09] 2,959 sequences; 43,499,819 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq2917 226 3e-54 >seq2917 Length=53793 Score = 226 bits (250), Expect = 3e-54 Identities = 1061/1670 (64%), Gaps = 40/1670 (2%) Strand=Plus/Plus Query 93718 TACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGCAGG 93777 ||| | ||||||| |||||| ||| ||||| || |||||||||||||| || || | | Sbjct 46269 TACCAATACTTTGGCTTCAAGACTTTGGAGCGATCATACCTCCTCAAGATTGACGGTAAG 46328 Query 93778 GTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCACGAC 93837 || |||||| || || || || | ||||| || | | || || || | || Sbjct 46329 ATTGTCGAGCGCCCACAGCACATGATCATGCGTGTGTCTGTTGGTATCTGGGGTGATGAT 46388 Query 93838 ATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAG--AGGTATAC---CATGG 93892 || | || ||| | | | || || || | |||| || | | | |||| Sbjct 46389 ATCGAGCGAGTCTTGGAGACATACA---ACCTGATGT-CAAGCAAGTTCTTCACGCATG- 46443 Query 93893 CCACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGA 93952 | |||| || || ||||| || || ||||| ||| || |||| || || ||| || Sbjct 46444 CTTCCCCCACGCTCTTCAATGCCGGCACCCCTCAGCCCCAATTGTCATCTTGCTTCTTGG 46503 Query 93953 TGACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCA 94012 | | |||| |||| || ||||| | ||| | |||||| |||||| | | Sbjct 46504 TTGATATGAAGGACGACAGTATTGAGGGAATCTACGATACTCTCAAGACCTGTGCCATGA 46563 Query 94013 TCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTA--CGTGCCAGGGGTTC 94070 |||| || || || || || || | | ||| ||| |||| ||||| | || || Sbjct 46564 TCTCCAAGATGGCTGGTGGTATTGGTCTGAATGTGCAC--CGTATCCGTGCTACTGGCTC 46621 Query 94071 CTACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAA 94130 |||||| ||||||||| || || || ||||| |||| |||||||| || |||||||| Sbjct 46622 ATACATCGCCGGTACCAACGGTACATCGAACGGTGTCGTTCCTATGCTTCGTGTCTTCAA 46681 Query 94131 CAACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTA 94190 |||| | || || || || ||||||||||| | | | ||| |||| || |||| Sbjct 46682 CAACACTGCTCGGTATGTCGACCAGGGTGGCAACAAGCGACCCGGTGCTTTTGCCATCTA 46741 Query 94191 TCTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAA 94250 |||||||| |||||| | || || | ||| | || || || ||||||||||| || Sbjct 46742 CCTCGAGCCTTGGCACTCTGATGTCTTCGAGTTCCTTGATCTCCGTAAGAACCACGGTAA 46801 Query 94251 CGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAA 94310 || || | ||| | ||||| ||| || || ||| | || || ||||||||||| Sbjct 46802 GGAGGAGGTCCGTGCCCGTGACCTTTTCCTTGCCCTTTGGATCCCTGATCTTTTTATGAA 46861 Query 94311 ACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTC 94370 || || || || ||| | ||||| ||| | || |||||||| || || || || | Sbjct 46862 GCGTGTTGAAAAGAACGGTGACTGGACACTTATGTGCCCCAATGAGTGCCCTGGCCTCGC 46921 Query 94371 CGACGTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGGC 94430 |||| | ||| | || || | |||| | ||||| | |||||||| Sbjct 46922 CGACTGCTACGGAGAGGAGTTCGAGGCTCTGTACGAAAAGTACGAGAAGGCGGGCAAGGG 46981 Query 94431 CAGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGAC 94490 | ||| || | ||| |||||| ||| | || | || | ||| ||||| Sbjct 46982 TCGCAAGACGATCAAGGCTCAGAAGCTTTGGTACGCCATTCTTGAGGCCCAGACTGAGAC 47041 Query 94491 GGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCT 94550 || | || | ||| | | ||| || | |||| |||| ||||| || |||| Sbjct 47042 CGGAAACCCATTCATGCTCTACAAAGATGCCTGCAACCGCAAGAGTAACCAAAAGAACCT 47101 Query 94551 CGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGA 94610 ||| ||| ||||| ||||| ||||| || ||| ||||||| | | || ||||| Sbjct 47102 CGGTACCATCCGAAGCTCCAATCTTTGCACTGAAATTATCGAGTACTGTGCCCCTGACGA 47161 Query 94611 GATTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAGATGCCTACAC 94670 | | || || || ||||| | ||| | ||| || | ||| | | | |||| Sbjct 47162 GGTCGCCGTCTGCAACCTTGCCTCTCTATCTCTGCCCTCCTTCAT-CAA-----CTAC-- 47213 Query 94671 GTCTACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCGCGGGAAGGATGGTCTT--G 94728 | |||| | ||| | || |||| || | | | ||| || | || Sbjct 47214 -GATGAGGCTTGCTACGACTTCAAGAAGCTGCACAAGGT--CAGTCAGGTTGTTATTCGC 47270 Query 94729 AACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTCAAAC 94788 |||||||||| | | ||||| |||| |||||| |||| |||||| ||| ||| Sbjct 47271 AACCTGAACAAGATCATCGATGTGAACCACTACCCTGTCCAGGAGGCTCGCAACAGTAAC 47330 Query 94789 CTGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGATGATG 94848 || || || ||||| || | || || |||||| | || || || | | || Sbjct 47331 ATGCGCCACCGACCCATTGGTCTTGGTGTTCAGGGTCTTGCCGATGCTTTCCTTGCTCTG 47390 Query 94849 CGTCTGCCCTACGACTCTGTCGACGCGGCGGGTTTGAATTTGAACATATTCGAAAGCATT 94908 || |||||| ||| || ||| || | | ||| | | || || || | |||| Sbjct 47391 CGCATGCCCTTCGAGTCCCCCGAGGCTCGTGAGCTCAATAAGCAGATTTTTGAGACCATT 47450 Query 94909 TATTACGGGGCCATGAAACAATCCGTCCACTTGGCCAGATCGGACGGCGGGCCACACGAA 94968 ||| ||| || ||| ||||| || |||| | ||| | || || || Sbjct 47451 TATCACGCTGCGCTGACTGCCTCCGTGCAGCTGGCTA---AGGAAGAGGGTCCCTACTCC 47507 Query 94969 TCGTTCCGCGGATCGCCCTTGGAACAGGGCATTTTTCAGTTCGACCTCTGGGGTGTGAAG 95028 | ||| || || ||| |||| ||| | ||||||||| | ||| || ||| Sbjct 47508 ACCTTCAAGGGTTCCCCCGCCTCTGAGGGTATTCTCCAGTTCGACATGTGGAACGTCAAG 47567 Query 95029 CCCTCGGGTCTGTACGACTGGGAAGCTCTACGCGCTGATGTTATCAAACACGGTGTGAAA 95088 ||||| | || | |||||||| |||| || | || || | | |||||| | Sbjct 47568 CCCTCTGACCTCTGGGACTGGGAGACTCTTCGAGAGGAAGTCAAGACACACGGCATCCGC 47627 Query 95089 AACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAACAAC 95148 ||| || || | || || ||||| || ||| || | ||||| || ||||||||| Sbjct 47628 AACAGTCTACTCCTTGCTCCTATGCCTACTGCCAGTACCTCCCAGATTCTGGGCAACAAC 47687 Query 95149 GAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGAATTC 95208 |||| ||||| |||| ||||||||| | ||| | | || || ||||| || || ||| Sbjct 47688 GAGTGCTTCGAGCCCTACACCTCCAATATCTACCAACGCCGTGTTCTCGCTGGTGAGTTC 47747 Query 95209 CCCGTCATCAACAAGCACCTCCTACGGGACC-TGACGTCTCTGGGTGTGTGGGGTGACAA 95267 | || ||||| || || ||||| || || | ||||| ||||| || Sbjct 47748 CAGGTTGTCAACCCCTGGCTGCTCAAGGACCTTGTCGAC-ATGGGTCTGTGGTCCGATGC 47806 Query 95268 GGTCAAGAACC----AACTGCTACGCGCCAACGGCTCCGTCCAGAACATCCCGCAAATAC 95323 | ||||||| | |||| | || || ||| | |||||||| || | || | Sbjct 47807 TATGAAGAACCGCATCATTGCT----GAGAATGGATCCATTCAGAACATTCCCAACATCC 47862 Query 95324 CGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAGCGC 95373 | | || ||||||| || || ||||| || ||||||||| | |||||| Sbjct 47863 CTGCCGATGTCAAGGCTCTGTATAAGACTGTTTGGGAGATCTCTCAGCGC 47912 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494704901425640