Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20fujikuroi_20[genbank_20GCA_5F001023065.1_202015-06-09] 2,959 sequences; 43,499,819 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq1446 230 3e-55 seq2251 86.0 8e-12 >seq1446 Length=10063 Score = 230 bits (254), Expect = 3e-55 Identities = 429/629 (68%), Gaps = 6/629 (1%) Strand=Plus/Plus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 ||||| || |||||||||||||| || || || || || | ||||| || |||||||| Sbjct 7149 TCGAAGTCCTCACCACCCAAGTGAGTGTCACCGGCAGTAGACTTGACCTCGAAGATACCC 7208 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 | |||||| | | | || ||||| || ||||||||||| || || || || || ||| Sbjct 7209 TCCTCAATGGTAAGGAGAGACACATCGAAGGTACCACCACCAAGATCGAAGATCAGGACG 7268 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 || ||| | || ||||| || |||||||| || || || || || || || || Sbjct 7269 TTGCGCTCGCCCTCAACCTTCTTGTCAAGACCGTAGGCAATGGCGGCAGCAGTAGGCTCG 7328 Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696 || ||||| || ||| ||| || || || || | ||||| || || ||||| || Sbjct 7329 TTGATAATTCGGAGAACGTTGAGACCGGCGATGAGACCAGCATCCTTGGTGGCTTGACGC 7388 Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGA 7756 || |||||||| |||||||| ||||| || || || |||| |||| ||| ||||| Sbjct 7389 TGAGAATCGTTGAAGTAGGCAGGGACAGTAACAACGGCGTTGTTGACAGTCTCGCCGAGG 7448 Query 7757 TACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCA 7816 || || || ||| | || ||| ||||| || | ||| | || ||||| || | | Sbjct 7449 TAAGACTCAGCGGTCTCACGCATCTTGGTGAGGATCATAGCAGAGATCTCCTCGGGGGTG 7508 Query 7817 AACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGG 7876 || || || || || || || || || || || |||| ||| || | | | Sbjct 7509 AAAGTCTTGGTCTCGCCCTTGAACTCGACCTCGATGTTGGGCTTA---CCACCCTTGTCG 7565 Query 7877 ATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTT 7936 | | ||| | | | | ||||||||| | || |||| |||| | ||||| | Sbjct 7566 ACGATCTTGAAGGGGAAGTGCTTCATATCGGCCTGAACCTCAGGGTCGGCGAACTTGCGA 7625 Query 7937 CCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTC 7996 ||||| | ||||| || || || || ||||| | ||||||||| || ||||||||| Sbjct 7626 CCGATCAATCGCTTGGCGTCGAAGACAGTGTTCTGGGGGTTCATAGCGACTTGGTTCTTG 7685 Query 7997 GCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTT 8056 || || || || || ||||| || | || || || ||||| | || ||||| ||| Sbjct 7686 GCGGCATCACCAATCAGACGCTC---GGTGTCGGTGAAACCGACGAATGAGGGGGTAGTT 7742 Query 8057 CGATTCCCTTGGTCGTTCGCAATAATTTC 8085 || || || |||||||| || || || || Sbjct 7743 CGGTTACCCTGGTCGTTGGCGATGATATC 7771 Score = 145 bits (160), Expect = 1e-29 Identities = 530/830 (64%), Gaps = 21/830 (3%) Strand=Plus/Plus Query 6569 TCATCTTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTTCGAT 6628 ||||| || || || ||||| || ||||| | | ||| || || || || || || Sbjct 4642 TCATCCTCCTCCTTGTACTTCTCAGCATCGTTAAGCATGCGCTCGATCTCCTCCTTGGAC 4701 Query 6629 AATCTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTATCTTCA 6688 | | ||||| ||||| ||||| |||||| | ||| || || | | |||| || | Sbjct 4702 AGGCGGCCCTTGTCATTGGTAATGACAATCTTGTTGGACTTGCCAGTGCCCTTCTCGACG 4761 Query 6689 GCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTA 6748 || || |||| ||||| || ||||||| |||||| | || | |||||| || | Sbjct 4762 GCGGAGACGTTCATGATACCGTTGGCATCAAGATCGAAGGTGACCTCAATTTGGGGAACA 4821 Query 6749 CCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGTC 6808 || | || || | || ||||| || | || || | || | | |||| ||| | Sbjct 4822 CCACGGGGGGCAGGAGGGATACCAGTGAGCTCGAACTTGCCCATGAGGTTGTTGTCCTTG 4881 Query 6809 GCCTTCTTACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTGTGCC 6868 | | ||| ||||| || ||||| | || || |||| || || || Sbjct 4882 GTGCGTTGACGCTCACCCTCGTAGACCTGGATAAGAACACCAGGCTGGTTGTCGGAGAAG 4941 Query 6869 GTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGTC 6928 || ||||||| | ||||| | || || || || || | || |||| | |||| Sbjct 4942 GTGGAGAAGACCTCGGACTTCTTGGTAGGGATGGTGGTGTTGCGGGGGATAAGCTTGGTC 5001 Query 6929 ATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGG 6988 || |||||||| || |||| || ||||| ||||| | || || ||| | |||| Sbjct 5002 ATCATACCACCAGCGGTCTCGATACCGAGAGAGAGAGGGGCGACATC---GAGAAGCAGG 5058 Query 6989 -TCTTGAACAGATTCGTTCCCTT-----------CACCCGTTAAGATGGCGGCTTGGACC 7036 ||| | || || |||| |||| | | || ||||| ||||| Sbjct 5059 ATCTCG------TTGGTGGCCTTGCTGGAGGTGTCACCTGAGAGAATCGCGGCCTGGACG 5112 Query 7037 GTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTA 7096 | || ||||| || || |||||||||||||| || | || || | || || ||||| Sbjct 5113 GCAGCACCGTAGGCAACAGCCTCATCGGGGTTGATGGACTTGTTGGGCTCCTTTCCGTTG 5172 Query 7097 AAATAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACG 7156 || ||||| | | | | || | ||||| || || ||||||||||| | || Sbjct 5173 AAGTAATCGGTGATGAGCTTCTGGACACGGGGGATACGAGTAGATCCACCGACGAGGACA 5232 Query 7157 ATTTCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCC 7216 || || | || || || |||||||| | ||| ||| ||||| || | Sbjct 5233 ATCTCGTGGACGAGGGACTTGTCGATCTTGGCGTCGGTAAGGACACGGTCGACGGGCTGG 5292 Query 7217 ATACATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTA 7276 ||| ||||| | ||| || || ||||| ||||| |||||||| ||||| || Sbjct 5293 ATAGTGGATCGGAAAAGATCCTGGCAGAGCTCCTCGAAACGAGCACGGGTGATGGAGGTG 5352 Query 7277 TAGAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGAT 7336 ||||| |||| || ||| | | || ||||| || || | || || || | ||||| Sbjct 5353 TAGAAGTCAATACCCTCGAAGAGAGAGTCAATCTCGATCGAGGTCTGAGCAGAGGAAGAA 5412 Query 7337 AACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACG 7386 | |||||||| || ||||| || || ||||| | ||| || ||||| || Sbjct 5413 AGTGTTCGCTTGGCACGCTCGCAAGCAGTTCGGAGACGTCGCAGGGCGCG 5462 >seq2251 Length=62747 Score = 86.0 bits (94), Expect = 8e-12 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 7704 CGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATT 7763 |||| |||||||| ||||| || ||||| |||| ||||| ||||||||||| || | Sbjct 19421 CGTTGAAGTAGGCGGGGACGGTAACGACGGCGTGGGTGACCTTCTTACCGAGGTAGCCCT 19362 Query 7764 CCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGTT 7823 | |||| || ||||| ||| ||||||||| | || ||||| |||| | ||||| | Sbjct 19361 CAGCGACCTCCTTCATCTTGCCAAGAACCATAGCAGAGATCTCCTCAGGAGTGAACTGCT 19302 Query 7824 TC 7825 || Sbjct 19301 TC 19300 Score = 86.0 bits (94), Expect = 8e-12 Identities = 166/243 (68%), Gaps = 3/243 (1%) Strand=Plus/Minus Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515 ||||||||| |||||||| | || || || || ||||| || ||| || ||||| || Sbjct 19716 ATCGAAATCCTCACCACCGAGATGGGTGTCACCAGCGGTAGCCAGGACCTCGAAGATGCC 19657 Query 7516 TCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTAC 7575 | ||||| | | || ||||| || ||||||||||| || || | | || | Sbjct 19656 GTCATCAATAGAGAGAAGGGAGACATCGAAGGTACCACCACCGAGATCGTAGACGATGA- 19598 Query 7576 GTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTC 7635 || || | || | | | |||| || |||||||| |||||||| || || || || || Sbjct 19597 -TTTGTCGC-TCACCATCGGTCTTGTCAAGACCGTAGGCGATAGCGGCGGCGGTGGGCTC 19540 Query 7636 ATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCG 7695 || | || || ||| ||| || || ||||| | | ||||| || || || ||||| Sbjct 19539 GTTGACGATTCGGAGAACGTTGAGACCGGCAATGATACCGGCATCCTTGGTGGCCTGTCG 19480 Query 7696 TTG 7698 || Sbjct 19479 CTG 19477 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635109308025560