Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20fujikuroi_20[genbank_20GCA_5F001023065.1_202015-06-09] 2,959 sequences; 43,499,819 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq2917 351 2e-91 seq362 192 1e-43 >seq2917 Length=53793 Score = 351 bits (388), Expect = 2e-91 Identities = 1233/1890 (65%), Gaps = 104/1890 (6%) Strand=Plus/Minus Query 212553 ACCGTAAACTGTACTGGATCAGCAGCAGCCTTGGTGCGTAGATAGTACATGCCGGTCTTT 212612 || || ||||| | ||| |||||||||||| || || || ||||||||||| ||||| Sbjct 48100 ACAGTGAACTGAATAGGAGCAGCAGCAGCCTGTGTACGAAGGTAGTACATGCCAGTCTTG 48041 Query 212613 AGGCC---CTTGCCCCAGCCGTGCAT-GTGCATTGCTG-TGAGTTTCTTCAGCTTAATAT 212667 ||||| ||| |||||| |||| |||||| |||| ||| |||| | || Sbjct 48040 AGGCCAAGCTT---CCAGCC-TGCAAAGTGCAT-GCTGGTGA---TCTTGCCC---ATCG 47992 Query 212668 TCTGGTCATCCTCGTGGCCCAGATGTAGGTTCAGGGACTGACTCTGGTCTATGAATGGGG 212727 | |||| | | |||| | |||||| ||||| ||| || ||||| | Sbjct 47991 TGGGGTCCTTCATGTGG---------ATGTTCAGTGACTGGGACTGATCAATGAAGGCAC 47941 Query 212728 CCCTGTCAGCGGCCATGTCTATGATATCTCTCTGGGAGAGCTCCCACACGGTCTTGAAGA 212787 | | ||||| ||||| | | || | | ||| |||| |||||| || ||||| | | Sbjct 47940 CTCGATCAGCAGCCATCTGGACGACCTGGCGCTGAGAGATCTCCCAAACAGTCTTATACA 47881 Query 212788 TTTCTTTGAGGTCCTCTGGGAAGCCGGGGATGTTCTGCACAGACCCCCTGTGTATGGTCA 212847 | |||| || | |||| | ||| |||||||| | || || || ||| Sbjct 47880 GAGCCTTGACATCGGCAGGGATGTTGGGAATGTTCTGAATGGATCC-------ATTCTCA 47828 Query 212848 GC--TGCAGGCG------CATGTCCTCGTTCCAGAGGCCCCTGGTCTCCAGGCACTTGAC 212899 || || | ||| ||| | ||| ||| || ||| || | ||| ||||| Sbjct 47827 GCAATG-ATGCGGTTCTTCATAGCATCGGACCACAGACCCATGTCGACAAGGTCCTTGAG 47769 Query 212900 CAGGTGAGGGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGA 212959 ||| |||||||| | |||||| ||||| | ||| || | | ||||| | || || Sbjct 47768 CAGCCAGGGGTTGACAACCTGGAACTCACCAGCGAGAACACGGCGTTGGTAGATATTGGA 47709 Query 212960 AGTGTAGGGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCAT 213019 ||||||||||||| || ||||||||| ||||||||||| | || ||||| || ||||| Sbjct 47708 GGTGTAGGGCTCGAAGCACTCGTTGTTGCCCAGAATCTGGGAGGTACTGGCAGTAGGCAT 47649 Query 213020 GGGAGCCACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAGGCGC---CGAAGC-T 213075 ||||| | || |||||||| | | ||||| | | ||| | ||||| | Sbjct 47648 AGGAGCAAGGAGTAGACTGTTGCGGATGCCGTGT--GTCT-TGACTTCCTCTCGAAGAGT 47592 Query 213076 CTGCCCAGTCCCATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCA 213135 || |||||||||| | |||| | ||| |||||||||||||| ||||| | Sbjct 47591 CT-CCCAGTCCCAGAGGTCAGAGGG---------CTTGACGTTCCACATGTCGAACTGGA 47542 Query 213136 AGATGCCTTTGCTCA----CGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTG 213191 || || |||| ||||| |||| | | | ||||||||| || | ||||| Sbjct 47541 GAATACC----CTCAGAGGCGGGGGAACCCTTGAAGGTGGAGTAGGGACCCTCTTCCTTA 47486 Query 213192 GCCAGCTCGCA-GGACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTT 213250 ||||||| ||| ||| || ||| ||||||| || ||||| ||||| |||| | | || Sbjct 47485 GCCAGCT-GCACGGAGGCAGTCAGCGCAGCGTGATAAATGGTCTCAAAAATCTGCTTATT 47427 Query 213251 GAGCTTCTTGGCCTCTGGGGACGTGAAGGGCATCATCATGCGTTGGAACACATCAGCCAG 213310 ||||| ||||| |||||| ||||||||| || |||| |||| || || Sbjct 47426 GAGCTCACGAGCCTCGGGGGACTCGAAGGGCATGCGCAGAGCAAGGAAAGCATCGGCAAG 47367 Query 213311 CCCCTGGACCCCGATGCCGATGGGTCTGTGTCTCAGGTTAGACTTG-GAGCACTCCTCCA 213369 ||||| || || | || ||||||| ||| | || |||| ||| |||| ||||| | Sbjct 47366 ACCCTGAACACCAAGACCAATGGGTCGGTGGCGCATGTTACTGTTGCGAGC-CTCCTGGA 47308 Query 213370 AGGGGTAAAAGTTGCAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACAT 213429 ||||| ||| |||||||||||||| |||||||| | | || | |||| | Sbjct 47307 CAGGGTAGTGGTTCACATCGATGATCTTGTTCAGGTTGCGAATAACAACCTGACTGACCT 47248 Query 213430 GGGCCAGGTACTCGTGATTGAACACGTAGCCCCCGTCCT-GCACAAACTCAGGCAGGGCG 213488 | ||| | || |||| |||||| | || | | | | | | ||||| Sbjct 47247 TGTGCAGCTTCT------TGAAGTCGTAGCAAGCCTCATCGTAGTTGATGAAGGAGGGCA 47194 Query 213489 ATGCT-----GGCCAGGTTGCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCT 213543 | | ||| |||||||| ||||| ||||| | || | | |||||| || || | Sbjct 47193 GAGATAGAGAGGCAAGGTTGCAGACGGCGACCTCGTCAGGGGCACAGTACTCGATAATTT 47134 Query 213544 CGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACT-TTGCGTTG 213602 | ||||| || ||| || ||||||||| || ||||||| ||||| ||| ||||| | Sbjct 47133 CAGTGCAAAGATTGGAGCTTCGGATGGTACCGAGGTTCTTTTGGTT--ACTCTTGCGGTT 47076 Query 213603 GCAGA-ATCCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTG 213661 |||| ||| |||||||||||| | ||| |||||||| ||||| | | || || Sbjct 47075 GCAGGCATCTTTGTAGAGCATGAATGGGTTTCCGGTCTCAGTCTGGGCCTCAAGAATGGC 47016 Query 213662 GCTCCAGAGGTACCTGGCCTTGACCACCCGCCTGACAGCTCCGGGCGTAGCCTCGTACTG 213721 | ||| || | | ||||||| | | | ||| | | || | |||||||| Sbjct 47015 GTACCAAAGCTTCTGAGCCTTGATCGTCTTGC-GACCCTTGCCCGCCTT--CTCGTACTT 46959 Query 213722 TTCGTAGAGCTCGTTGAATTCGTGGCCCCAGACCCTGTCCAGTCCCGGACAGGATGCGGG 213781 |||||| || | | ||| || | || || | | || || || || ||| Sbjct 46958 TTCGTACAGAGCCTCGAACTCCTCTCCGTAGCAGTCGGCGAGGCCAGGGCACTCATTGGG 46899 Query 213782 ACACATGAGGCTCCAGTCCCCGTCATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCA 213841 ||||| || ||||||| |||| | | || | || ||| || || || |||| ||| Sbjct 46898 GCACATAAGTGTCCAGTCACCGTTCTTTTCAACACGCTTCATAAAAAGATCAGGGATCCA 46839 Query 213842 CAGCGCGGTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATC 213901 || || ||| ||||| | || | ||| ||| || ||| || || ||||| Sbjct 46838 AAGGGCAAGGAAAAGGTCACGGGCACGGACCTCCTCCTTACCGTGGTTCTTACGGAGATC 46779 Query 213902 TAGAAAGTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCG---G 213958 || || || |||| || | |||||| ||||| | |||||||||||| || || | | Sbjct 46778 AAGGAACTCGAAGACATCAGAGTGCCAAGGCTCGAGGTAGATGGCAAAAGCACCGGGTCG 46719 Query 213959 CCTCTTGCCGCCCTGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTAC 214018 | | ||||| |||||||| || || || ||||||||| || || | || || Sbjct 46718 CTTGTTGCCACCCTGGTCGACATACCGAGCAGTGTTGTTGAAGACACGAAGCATAGGAAC 46659 Query 214019 CAGCCCGTTGGACTGT-CCGTTGGTTCCCGCTATATACGAGCCGGAGGCCC--TCAGGTT 214075 | ||||| || ||| |||||||| || || || || ||||| | || | | | | Sbjct 46658 GACACCGTTCGA-TGTACCGTTGGTACCGGCGATGTATGAGCCAGTAGCACGGATACGGT 46600 Query 214076 GCTCATGGAGAGCCCTATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGT 214135 || ||| ||| || || ||||| || ||||||||||||||| ||| | | | ||| Sbjct 46599 GCACATTCAGA--CCAATACCACCAGCCATCTTGGAGATCATGGCACAGGTCTTGAGAGT 46542 Query 214136 CTCCATGATGCCGGCCATGCTGTCATCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTG 214195 || ||| || | || ||||| || | | | | ||||||||| || | || Sbjct 46541 ATCGTAGATTCCCTCAATACTGTCGTCCTTCATATCAACCAAGAAGCAAGATGACAATTG 46482 Query 214196 GGGCCTGGACGAGCCAGAGTTGAAAAGCGTGGGGCTGGCATGGATCATAAACTTGTTAGA 214255 |||| | | ||| | ||||| ||||||||| ||||| | | |||||| | || Sbjct 46481 GGGCTGAGGGGTGCCGGCATTGAAGAGCGTGGGGGAAGCATGCGTGAAGAACTTGCTTGA 46422 Query 214256 GAGGAGCCTGTAGGTCTCCAGGACTGAGGGGATGTCGTGCTTGTGGATCTGTAGAG-CGC 214314 | || |||| ||||||| |||| ||| || | ||| | || | | Sbjct 46421 CATCAGGTTGTATGTCTCCAAGACTCGCTCGATATCATCACCCCAGATACCAACAGACAC 46362 Query 214315 ACCTCATCAGCATGTGCTGGGGCCTCTCTATGGGTCCTTTGGGGC--CCTTGAGCAGGTA 214372 | | ||| | ||||||||| || | ||| | ||| | | |||||| ||||| Sbjct 46361 A-CGCATGATCATGTGCTGTGGGCGCTCGA--CAATCTTACCGTCAATCTTGAGGAGGTA 46305 Query 214373 GGAGCGCTCCAGAGTCTTGAACCCAAAGTA 214402 || ||||||| ||||||||| |||||||| Sbjct 46304 TGATCGCTCCAAAGTCTTGAAGCCAAAGTA 46275 >seq362 Length=14512 Score = 192 bits (212), Expect = 1e-43 Identities = 488/733 (67%), Gaps = 21/733 (3%) Strand=Plus/Minus Query 47840 TGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTCC 47899 |||||||| | || | ||||| |||||||| ||||| || | | |||||||| ||| Sbjct 12208 TGGTAGTCGGCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCAAGGGAGATGTTTTCC 12149 Query 47900 ATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAGGCCCATCTGTTCCA-GCAG 47958 |||||| ||||||||||| | || || ||| | || ||| | || | || Sbjct 12148 ATGAAGTCGAAGGGGTTGGTGGCCTTGTAGACCT-TCTCGTTGCCAAGAGCGACAAGGAG 12090 Query 47959 GTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGGA 48018 |||| |||||| |||| ||||| | ||||||| ||||||||| | |||| Sbjct 12089 ACGATCAGCGACGAACTCAATGTACTGCTTCATGAGGTCAGAGTTCATGCCGAGAAGGG- 12031 Query 48019 CACGGGCAA-AGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCT 48077 ||| || || ||||| ||||| ||||||| || || ||||| || | || | Sbjct 12030 CACAGGGAAGAGCCTCAGTGAGGAACTCCTGTTCAATGGTGACGGCATCAGTGATGATAT 11971 Query 48078 GCTTAACGCGGGACTCTGAGGGTTTGTTGCGCA-GGTGCTTG------GCATAGAGCATG 48130 ||| | | |||| ||| || ||| || ||| | | ||| | | Sbjct 11970 -CTTGAATCA----TCTGC----TTGCTG-GCACGGCCCTTTAGGTGAGAGTGGAGGAGG 11921 Query 48131 CAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGA 48190 ||||||||||| |||| | || ||||| || ||||||| |||| |||||| ||| Sbjct 11920 CAGGCAAAGTCAGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTAGAGAAGGTCAGA 11861 Query 48191 CCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAG 48250 |||||||||| || | || |||||||||||||| | ||||| | ||| ||||||| Sbjct 11860 CCAGGCATGAGACCACGCTTCTTGAGCCAGAAAATGGAGGCGAAGGCACCACTGAAGAAG 11801 Query 48251 ATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAG 48310 || ||||| || || ||||| || ||| | | | || |||| || ||| ||| | Sbjct 11800 ATACCCTCAACGGCAGCGAAAGCAACGAGGCGTTGGGCAAAGGAAGAGTCCTTATCTTGG 11741 Query 48311 ATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGG 48370 ||||| | |||||||| |||||||| |||||| || || ||||| ||||| | Sbjct 11740 ATCCATCGGATGGCCCAGTCAGCCTTCTTTCGGATGCAGGGAATGGTCTCAATGGCGTTG 11681 Query 48371 AAGAGCTTCTTGCACTCACCTGCGTCCGCAACATAGGTAGTGAGCAGCTTTGCGTACATC 48430 || || | | | || | | ||| | |||||| || || | ||| || Sbjct 11680 AAAAGGTAGGTTCGCTGGGCGGGCTCCTTGATATAGGTGTCGATGAGGAGGGAGTAGGTC 11621 Query 48431 TCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACC 48490 || ||||| | ||||| || ||||||||| |||||||| | ||||| | | Sbjct 11620 TCGGAGTGAATGTTCTCCATCATGATCTGGAAGCCGTAGAAACAACGAGCCTCGGGGATC 11561 Query 48491 TGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAGCA 48550 || || || ||||| ||| | || ||||| ||||| || ||||| || ||||| Sbjct 11560 TGGACCTCGCCACTGAATCGCTCGACGAGGTTCTCGTTGACAATACCATCAGAGGCAGCG 11501 Query 48551 AAGAAGGCAAGGA 48563 ||||| ||||||| Sbjct 11500 AAGAAAGCAAGGA 11488 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931498344930560