Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20fujikuroi_20[genbank_20GCA_5F001023065.1_202015-06-09] 2,959 sequences; 43,499,819 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq2917 190 2e-43 seq362 104 3e-17 seq487 87.8 2e-12 >seq2917 Length=53793 Score = 190 bits (210), Expect = 2e-43 Identities = 1133/1783 (64%), Gaps = 55/1783 (3%) Strand=Plus/Plus Query 75211 CCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGT 75270 ||||||| ||||| ||||||| || | | || ||| || || || || || || Sbjct 46340 CCCACAGCACATGATCATGCGTGTGTCTGTTGGTATCTGGGGTGATGATATCGAGCGAGT 46399 Query 75271 CTTGGAGACATACGACAAGATGTCCCAAGGTATGTTCATTCACGCAA----CACCAACCC 75326 ||||||||||||| || |||||| | | | |||| |||||||| | || || | Sbjct 46400 CTTGGAGACATACAACCTGATGTC---AAGCAAGTTC-TTCACGCATGCTTCCCCCACGC 46455 Query 75327 TCTTCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGG 75386 |||||||||| || || || || || |||| ||||||| | | | | |||| Sbjct 46456 TCTTCAATGCCGGCACCCCTCAGCCCCAATTGTCATCTTGCTTCTTGGTTGATATGAAGG 46515 Query 75387 AGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGG 75446 | ||| || | || ||||| | ||||| | | ||||| ||||| ||| || Sbjct 46516 ACGACAGTATTGAGGGAATCTACGATACTCTCAAGACCTGTGCCATGATCTCCAAGATGG 46575 Query 75447 CTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTAT-TCGGGGG 75505 |||| |||||||| || | | || | | | || | | ||| || ||| || Sbjct 46576 CTGGTGGTATTGGTCTGAATGTGCACCGTATCCGTGCTACTGG--CTCATACATCGCCGG 46633 Query 75506 -ACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCG 75564 || || ||| ||| | ||| | |||| |||||||| || || ||| ||| || || Sbjct 46634 TACCAACGGTACATCGAACGGTGTCGTTCCTATGCTTCGTGTCTTCAACAACACTGCTCG 46693 Query 75565 CTATGTAAATCAAGCGGGGCGTC--GCAAGG-GGTCCATC-GCGGTCTACTTGGAACCAT 75620 ||||| | || | | ||| | || | ||| | | || ||||| | || || | Sbjct 46694 GTATGTCGACCAGG-GTGGCAACAAGCGACCCGGTGCTTTTGCCATCTACCTCGAGCCTT 46752 Query 75621 GGCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTC 75680 |||| | ||| || | ||||||||||| | || ||||| ||| | || |||| || Sbjct 46753 GGCACTCTGATGTCTTCGAGTTCCTTGATCTCCGTAAGAACCACGGTAAGGAGGAGG-TC 46811 Query 75681 GGTGTA-GAGATCTCTTTTCAT-CCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGA 75738 ||| | || || ||| | | |||| ||||| || || ||||| |||||||| ||||| Sbjct 46812 CGTGCCCGTGACCT-TTTCCTTGCCCTTTGGATCCCTGATCTTTTTATGAAGCGTGTTGA 46870 Query 75739 GGAGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGT 75798 || ||| | ||| | ||| | || || | || || || ||| ||||| Sbjct 46871 AAAGAACGGTGACTGGACACTTATGTGCCCCAATGAGTGCCCTGGCCTCGCCGACTGCTA 46930 Query 75799 GGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGC---CAATGC 75855 || |||||||| || || || ||| |||||| || ||| ||| | | ||| | Sbjct 46931 CGGAGAGGAGTTCGAGGCTCTGTACGAAAAGTACGAGAAGGCGGGCAAGGGTCGCAAGAC 46990 Query 75856 GACTGTACCAGCCGCCGATG-TTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAA 75914 || | || | | || | ||||| | || ||||| | | ||||| ||||| |||| Sbjct 46991 GAT----CAAGGCTCAGAAGCTTTGGTACGCCATTCTTGAGGCCCAGACTGAGACCGGAA 47046 Query 75915 CACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAA 75974 |||| ||||| ||||| ||||| || ||| ||||||||||||||||| | || | Sbjct 47047 ACCCATTCATGCTCTACAAAGATGCCTGCAACCGCAAGAGTAACCAAAAGAACCTCGGTA 47106 Query 75975 CAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGG 76034 | ||| ||||| ||||||||||| |||||| | |||||| | || ||| | Sbjct 47107 CCATCCGAAGCTCCAATCTTTGCACTGAAATTATCGAGTACTGTGCCCCTGACGAGGTCG 47166 Query 76035 CTGTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCA---ATGAAGAGACTCGCA 76091 | || ||||| | || || | | || || | ||| | || ||| || || Sbjct 47167 CCGTCTGCAACCTTGCCTCTCTATCTCTGCCCTCCTTCATCAACTACGATGAGGCTTGC- 47225 Query 76092 CTTTTGATTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAG 76151 | || | | || || || | ||| || |||||| || || ||| Sbjct 47226 --TACGACTTCAAGAAGCTGCACAAGGTCAGTCAGGTTGTTATTCGCAACCTGAACAAGA 47283 Query 76152 TCATTGACAGAAATTTTTATCCCGTTGAGACTGCGCGAAAGTCTAATATGCGACACAGAC 76211 |||| || || || || || || || || || ||| ||||| ||| ||| Sbjct 47284 TCATCGATGTGAACCACTACCCTGTCCAGGAGGCTCGCAACAGTAACATGCGCCACCGAC 47343 Query 76212 CTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATT-TTGTGCCGCTACGCATTT 76270 | |||||| | |||||||| ||||| || |||| || || | || ||| | || Sbjct 47344 CCATTGGTCTTGGTGTTCAGGGTCTTGCCGATGCTTTCCTTGCTCTG-CGCATGCCCTTC 47402 Query 76271 GATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCC 76330 || || || || ||| | ||| | || ||||| ||||| |||||||| | Sbjct 47403 GAGTCCCCCGAGGCTCGTGAGCTCAATAAGCAGATTTTTGAGACCATTTATCACGCTGCG 47462 Query 76331 CTGGAGGCGAGTTGTG-AATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTC 76389 ||| || ||| | ||||| | | | ||| |||| || || ||||||| Sbjct 47463 CTGACTGC-CTCCGTGCAGCTGGCTAAGGAAGAGGGTCCCTACTCCACCTTCAAGGGTTC 47521 Query 76390 TCCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAAGCT--CAAC 76447 ||||| || | || | || ||||| || |||| |||| || || || || | | Sbjct 47522 CCCCGCCTCTGAGGGTATTCTCCAGTTCGACATGT-GGAACGTCAAGCC-CTCTGACCTC 47579 Query 76448 TACGACTGGGA---TGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTT 76504 | |||||||| | ||| ||||| ||||| | || | || |||||||| Sbjct 47580 TGGGACTGGGAGACTCTTCGAGAGGAA---GTCAAGACACACGGCATCCGCAACAGTCTA 47636 Query 76505 TTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTT 76564 | | || || ||||| || ||| ||| | || || |||| || || || ||||| Sbjct 47637 CTCCTTGCTCCTATGCCTACTGCCAGTACCTCCCAGATTCTGGGCAACAACGAGTGCTTC 47696 Query 76565 GAACCATACACAACAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCATTGTC 76624 || || ||||| | || ||||||| | | ||||| |||||||| ||||| Sbjct 47697 GAGCCCTACACCTCCAATATCTACCAACGCCGTGTTCTCGCTGGTGAGTTCCAGGTTGTC 47756 Query 76625 AACAAGCACCTCGTCAATGACCTCAAGAAGATTGGTCTCTGGTCCAAGGATATGAAGGAT 76684 ||| || |||| ||||| | || ||||| |||||| | | ||||||| | Sbjct 47757 AACCCCTGGCTGCTCAAGGACCTTGTCGACATGGGTCTGTGGTCCGATGCTATGAAGAAC 47816 Query 76685 CTCATGGTGAAAGCGGGTGGTTCCATTCAAAATATCTCAGATATCCCAGATGATATCAAG 76744 | ||| | | | ||| |||||||| || || | | ||||| | ||| ||||| Sbjct 47817 CGCATCATTGCTGAGAATGGATCCATTCAGAACATTCCCAACATCCCTGCCGATGTCAAG 47876 Query 76745 AATCTCTACCGCACAGTGTGGGAAATCAAGATGAAAGATGTCATTGACATGGCCGCAGAT 76804 ||| || || || ||||| ||| | | ||| | | ||||| || ||| Sbjct 47877 GCTCTGTATAAGACTGTTTGGGAGATCTCTCAGCGCCAGGTCGTCCAGATGGCTGCTGAT 47936 Query 76805 CGTGGTCGCTTCATTGATCAAAGTCAAAGT--ATGAATCTATTCATGGAAAGTCCAACGA 76862 || ||| ||||||||||| |||| ||| |||| | |||| | || |||| Sbjct 47937 CGAGGTGCCTTCATTGATC--AGTCCCAGTCACTGAACATCCACATGAAGGACCCCACGA 47994 Query 76863 TGTCCAAGCTCTCTTCTATGCA-TATGTACGCGTGGAAACAGGGGCTCAAAACCGGAATG 76921 || |||| || | ||||| | || | || ||||| | || ||||| || || ||| Sbjct 47995 TGGGCAAGATCACCAGCATGCACTTTGCAGGC-TGGAAGCTTGGCCTCAAGACTGGCATG 48053 Query 76922 TACTATCTCCGATCAAAGGCGAAAGCCCGACCAATTCAGTTCA 76964 ||||| || || || |||| || || |||||||||| Sbjct 48054 TACTACCTTCGTACACAGGCTGCTGCTGCTCCTATTCAGTTCA 48096 >seq362 Length=14512 Score = 104 bits (114), Expect = 3e-17 Identities = 299/457 (65%), Gaps = 16/457 (4%) Strand=Plus/Plus Query 65068 TCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCA 65127 ||||| ||| | ||||| |||| || || || ||||||||||||||| || | Sbjct 11757 TCCTTTGCCCAACGCCTCGTTGCTTTCGCTGCCGTTGAGGGTATCTTCTTCAGTGGTGCC 11816 Query 65128 TTCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAAT 65187 ||| | | |||| ||| | |||||||| ||||||||||| || || |||||| || Sbjct 11817 TTCGCCTCCATTTTCTGGCTCAAGAAGCGTGGTCTCATGCCTGGTCTGACCTTCTCTAAC 11876 Query 65188 GAACTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGCCGTGGAGCTCTTCAAGACT 65247 || || || || || || |||||||| ||| || |||||| || ||| || | || Sbjct 11877 GAGCTCATCTCTCGTGACGAGGGTCTTCACACTGACTTTGCC-TG--CCTCCTCCACTCT 11933 Query 65248 TTGCGTAATAGAC---CCACTACCGAAACTATCCACGCCATCGTGAAAGAGGCGGTTGAG 65304 | || | | ||| | | | || || | ||| | | || || || Sbjct 11934 CACCTAAAGGGCCGTGCCAGCAAGCAGATGATTCAAGATATCATCACTGATGCCGTCACC 11993 Query 65305 ATTGAGAAAGGGTTCATCTTGGACGCACTCCCATGTAATCTCATCGGTATGAACTCTGAG 65364 ||||| | | |||| || || || || || ||| || |||| ||||||||||| Sbjct 11994 ATTGAACAGGAGTTCCTCACTGAGGCTCTTCCCTGTGCCCTTCTCGGCATGAACTCTGAC 12053 Query 65365 AAGATGTCCGAGTACATTGAGTATGTGTCGGATCGTCTCCTCAAACAAGTTGGGGTGCCA 65424 ||| |||||||||||| || | ||||||||||| |||| || Sbjct 12054 CTCATGAAGCAGTACATTGAGTTCGTCGCTGATCGTCTCCTTGTCGCTCTTGG-----CA 12108 Query 65425 CCCA-----TTTGGAACGCGAAGAATCCATTTGACTTTATGGAAAACATTAGCCTTGATG 65479 | | | | || || | || || || ||||| ||||||||||| ||||| | Sbjct 12109 ACGAGAAGGTCTACAAGGCCACCAACCCCTTCGACTTCATGGAAAACATCTCCCTTGGCG 12168 Query 65480 GGAAGACCAACTTCTTTGAGAAGCGAGTTGGGGACTA 65516 | |||||||||||||| |||||||| |||| ||||| Sbjct 12169 GCAAGACCAACTTCTTCGAGAAGCGTGTTGCCGACTA 12205 >seq487 Length=35546 Score = 87.8 bits (96), Expect = 2e-12 Identities = 123/173 (71%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 27858 GCGCTCAAGGACAAGTTGTGCGATGCGATCCCCTTTCTTTACCTCAAAGTCTTTGTCTCC 27917 |||||| || |||||||| || ||||| || || | ||| ||||||||||| || Sbjct 4547 GCGCTCCAGAACAAGTTGAGCAATGCGGTCGCCCTCCTTCACCTCAAAGTCGGATTCGTT 4606 Query 27918 GTGATTGAAGAGAACGACTTTGACTTCACCTGTATAGTCGGGATCAATAACACCCGCACC 27977 || |||||||| | ||| ||||| | ||| || |||| ||| || ||||| || || Sbjct 4607 ATGGTTGAAGAGCAGGACCTTGACCTGACCGCGGTAATCGGCATCGATGACACCAGCGCC 4666 Query 27978 AACTTGAATACCATGCTTCACAGCGAGACCGGATCGTGGTGCAACACGACCAT 28030 | ||| |||||| ||||||||| ||||| || |||| || |||| Sbjct 4667 TGTGTCAATGAAATGCTTGGAAGCGAGACCCGATCGAGGGGCAATGCGTCCAT 4719 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596547534381920