Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20fujikuroi_20[genbank_20GCA_5F001023065.1_202015-06-09] 2,959 sequences; 43,499,819 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq2917 172 2e-37 seq362 147 6e-30 seq1835 107 6e-18 seq995 107 6e-18 >seq2917 Length=53793 Score = 172 bits (190), Expect = 2e-37 Identities = 574/881 (65%), Gaps = 19/881 (2%) Strand=Plus/Minus Query 155630 GTATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTT 155689 ||| || | ||| ||| ||| || || || || |||||| || | ||||| ||||| Sbjct 47147 GTACTCGATAATTTCAGTGCAAAGATTGGAGCTTCGGATGGTACCGAGGTTCTTTTGGTT 47088 Query 155690 AGATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGC 155749 | || | ||| || ||||| ||||| || ||| ||||| |||| ||||| |||| || Sbjct 47087 ACTCTTGCGGTTGCAGGCATCTTTGTAGAGCATGAATGGGTTTCCGGTCTCAGTCTGGGC 47028 Query 155750 GTCCAGAATCTTTAGCCAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTTCCGA 155809 || ||||| ||| || | | || || || |||| |||| || Sbjct 47027 CTCAAGAATGGCGTACCAAAGCTTCTGAGCCTTGATCGTCTTGCGACCCTTGCCCGCCTT 46968 Query 155810 CTCATA--TTTCATATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGG 155867 ||| || |||| || | ||| | | | ||||| ||||| || || || |||||| Sbjct 46967 CTCGTACTTTTCGTACAGAGCCTC--GAACTCCTCTCCGTAGCAGTCGGCGAGGCCAGGG 46910 Query 155868 CACTTATCGGGGCAAAACAGCGACCA---AATTTTATTACCGATTACACGCTCCATAAAT 155924 |||| || |||||| | || | ||| | || || | | |||||| |||||| Sbjct 46909 CACTCATTGGGGCACATAAGTGTCCAGTCACCGTTCTTTTCAA---CACGCTTCATAAAA 46853 Query 155925 ACATCACTCGCCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCCGTGA 155984 | |||| ||||| ||| ||||||||| | || |||||| | ||||| Sbjct 46852 AGATCAGGGATCCAAAGGGCAAGGAAAAGGTCACGGGCACGGACCTCCTCCTTACCGTGG 46793 Query 155985 TTCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCA 156044 ||||| || || || | ||| || | ||||| || ||||| || || || ||| Sbjct 46792 TTCTTACGGAGATCAAGGAACTCGAAGACATCAGAGTGCCAAGGCTCGAGGTAGATGGCA 46733 Query 156045 AAACTACCATTCCTCTTG---CCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACA 156101 ||| ||| | |||| |||||||| || |||||||||||||| || ||||||||| Sbjct 46732 AAAGCACCGGGTCGCTTGTTGCCACCCTGGTCGACATACCGAGCAGTGTTGTTGAAGACA 46673 Query 156102 CCTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGAT 156161 | |||||||||| | ||| || || || || ||||| ||| || | || |||| Sbjct 46672 CGAAGCATAGGAACGACACCGTTCGATGTACCGTTGGTACCGGCGATGTATGAGCCAGTA 46613 Query 156162 GAGCGAACATTATGAATATGTAGTCCAATACCACCTGACCAT-TTAGAAATTTGAGCGCA 156220 | || | | || | || || ||||||||||| | |||| || || || || || Sbjct 46612 GCACGGATACGGTGCACATTCAGACCAATACCACCAG-CCATCTTGGAGATCATGGCACA 46554 Query 156221 TTCCTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCAT-TGATAGTAGATAGC 156279 ||| | ||||| | | || || |||||| || || | ||| | | ||| ||| Sbjct 46553 GGTCTTGAGAGTATCGTAGATTCCCTCAATACTGTCGTCCTTCATATCAACCAAGA-AGC 46495 Query 156280 ACGAACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAA 156339 | || ||||| || | || || || || ||||| || || || | ||||| | | Sbjct 46494 AAGATGACAATTGGGGCTGAGGGGTGCCGGCATTGAAGAGCGTGGGGGAAGCATGCGTGA 46435 Query 156340 AATACTTATTAGACATATAATCGTATGTCTCCTTAATCTTCTCAAGATTA-GACCCGTGA 156398 | |||| | ||||| | |||||||||| | ||| | || | |||| | Sbjct 46434 AGAACTTGCTTGACATCAGGTTGTATGTCTCCAAGACTCGCTCGATATCATCACCCCAG- 46376 Query 156399 ATACAGATAGAGACCCTCATCCACATATGCTGAGGACGCTCTACAATCACTCCATCAATT 156458 |||| | ||| || | ||| ||| ||||| || ||||| |||||| || ||||| Sbjct 46375 ATACCAACAGACACACGCATGATCATGTGCTGTGGGCGCTCGACAATCTTACCGTCAATC 46316 Query 156459 CGCAGAAGGTATGCGCGTTCCAGAGTTTTAAACCCGAAATA 156499 || ||||||| || |||| ||| || || || || || Sbjct 46315 TTGAGGAGGTATGATCGCTCCAAAGTCTTGAAGCCAAAGTA 46275 >seq362 Length=14512 Score = 147 bits (162), Expect = 6e-30 Identities = 349/523 (67%), Gaps = 6/523 (1%) Strand=Plus/Plus Query 133305 CCGAAGCCCGTGCCTTTTATGGGCTACAGATTGCGATGGAAAATATCCATTCTATCACAT 133364 |||| || ||| || || || | ||||| |||||| || || || || || | Sbjct 11566 CCGAGGCTCGTTGTTTCTACGGCTTCCAGATCATGATGGAGAACATTCACTCCGAGACCT 11625 Query 133365 ATTCTACTCTAATTGATACTTACATCAAAGATACCGTCCAGAAGCACAAACTATTCAACG 133424 | || || || || || || ||||| || ||| |||| | | || ||||||| Sbjct 11626 ACTCCCTCCTCATCGACACCTATATCAAGGAGCCCGCCCAGCGAACCTACCTTTTCAACG 11685 Query 133425 CCATTAGCGAAT-TTCCTTGTATTAAAAAGAAATCTGACTGGGCTATTAAATGGATCCAG 133483 ||||| | || |||| || || |||||| |||||||||| || ||||||||| Sbjct 11686 CCATT-GAGACCATTCCCTGCATCCGAAAGAAGGCTGACTGGGCCATCCGATGGATCCAA 11744 Query 133484 GACAAGCGTGCGAGTTTTGCTACTCGTCTCGTTGCTTTTGCTGTAGTAGAGGGCAttttt 133543 || ||| | ||||| || ||||||||||| |||| || ||||| || || Sbjct 11745 GATAAGGACTCTTCCTTTGCCCAACGCCTCGTTGCTTTCGCTGCCGTTGAGGGTATCTTC 11804 Query 133544 ttCAGTGGTGCGTTCTGCTCTATTTTTTGGCTTAAAAAGCGTGGTATTCTACCTGGACTG 133603 ||||||||||| ||| ||| ||||| ||||| || ||||||||| | | ||||| ||| Sbjct 11805 TTCAGTGGTGCCTTCGCCTCCATTTTCTGGCTCAAGAAGCGTGGTCTCATGCCTGGTCTG 11864 Query 133604 TGTTTTTCTAACGAACTTATTTCAAGGGACGAGGCACTTCACACCGAATTTGCCGTTTTA 133663 || |||||||| || || || | ||||||| |||||||| || |||||| | Sbjct 11865 ACCTTCTCTAACGAGCTCATCTCTCGTGACGAGGGTCTTCACACTGACTTTGCCTGCCTC 11924 Query 133664 CTTCACTCTAAATTAGAGCGACCACTCAAAAAGAATAAGATTGAAGAAATTATTAGAGAA 133723 || |||||| | || || | | || ||| | | |||| |||| || || | || Sbjct 11925 CTCCACTCTCACCTAAAGGGCCGTGCCAGCAAGCAGATGATTCAAGATATCATCACTGAT 11984 Query 133724 GCGGTTGAAATTGAGGTTGAATTTATCAATAGTGCTCTGCC--GTGCCGTTTAATTGGTA 133781 || || ||||| || || ||| | ||||| || ||||| || | || | Sbjct 11985 GCCGTCACCATTGAACAGGAGTTCCTCACTGAGGCTCTTCCCTGTGCCCTT--CTCGGCA 12042 Query 133782 TGAATGATGTGCTGATGCAGCGTTATATTGAATTTGTAGCTGA 133824 |||| || || ||| ||| || ||||| || || ||||| Sbjct 12043 TGAACTCTGACCTCATGAAGCAGTACATTGAGTTCGTCGCTGA 12085 >seq1835 Length=26937 Score = 107 bits (118), Expect = 6e-18 Identities = 122/164 (74%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 251407 ATAAGACCACACTTATTACACACATGGACGCTGTAAGCATCAGATGCGTCATATAGCCGA 251466 || || ||||| | | || || ||||| | | ||||||| || | ||| | || || Sbjct 22530 ATGAGTCCACAAATCTCGCAGACGTGGACACGGAAAGCATCCGACACCTCAAACAGACGC 22471 Query 251467 CCCTTGGTGAAGCGAGATGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAA 251526 |||| ||| || ||||| || | ||||||||||||||| |||||||| ||||| Sbjct 22470 TCCTTCAGGAAAGCAGCGGCACCATGAGCAATCATACAATCACGTTCCATTTCTCCGAAT 22411 Query 251527 CGAAGACCACCATCGCGAGCCCTACCCTCGGCAGGCTGACGAGT 251570 || ||||||||||| ||||| | ||||||| ||||||| || || Sbjct 22410 CGGAGACCACCATCACGAGCACGACCCTCGACAGGCTGTCGGGT 22367 >seq995 Length=28228 Score = 107 bits (118), Expect = 6e-18 Identities = 189/273 (69%), Gaps = 2/273 (1%) Strand=Plus/Minus Query 302572 TCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCT 302631 ||||||| | ||||| || || |||||||||||||| ||| | || || || || Sbjct 356 TCTTCCAGAGCCTTGACCAATCGTCGCTGAATATAACCTGTTTCGGCAGTCTTGACGGCA 297 Query 302632 GTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGT-AG 302690 || ||||| ||||| | |||||| |||| || |||||||| | ||| | || || || Sbjct 296 GTGTCAATAAGACCTTCTCGACCAGCCATGGCGTGGAAGAAGAACTC-GCTGGGAGTGAG 238 Query 302691 CCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGT 302750 || | | | ||| |||| || || ||||| ||||| || || | ||| |||||| Sbjct 237 ACCACGGAGGTAAGAGTTCTCGACAAAGCCACGGGCCTCAGGTGAGTAATCGTCCTTGGT 178 Query 302751 AAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTG 302810 ||||| || | || | | || | ||| | || |||||||| || ||||| | || Sbjct 177 GAAGTGAGGTAATGTGCGATACTTGAAACCGAAAGGAATACGCTTGCCTTCAACAATTTG 118 Query 302811 CTGTCCCAGGCACGAAATCATCTGCGAAATATT 302843 ||| || | || | |||| || |||||||| Sbjct 117 CTGACCGACAAGCGCAGTCATTTGAGAAATATT 85 Score = 93.3 bits (102), Expect = 1e-13 Identities = 105/140 (75%), Gaps = 3/140 (2%) Strand=Plus/Minus Query 301813 AGAATTTCTTCAATACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGCA 301872 |||||||| | | ||| || |||||| | || ||||| |||||||| |||||||| Sbjct 1133 AGAATTTCCTTGAGACGTGGCACACCAAGAGTAACGTT---CTTGGACGACACACCAGCG 1077 Query 301873 AAGTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAATC 301932 || ||||| || ||||| || | ||||||| |||||||||||| || || || | Sbjct 1076 AAATGGAAGGTGTTCAGTGTCATCTGAGTAGCAGGCTCACCAATAGACTGCGCAGCCAGA 1017 Query 301933 ATACCAACCATTTCTCCTGG 301952 | |||||||||||| || || Sbjct 1016 ACACCAACCATTTCACCAGG 997 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471761800175183