Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20fujikuroi_20[genbank_20GCA_5F001023065.1_202015-06-09]
2,959 sequences; 43,499,819 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq338 98.7 9e-16
>seq338
Length=10966
Score = 98.7 bits (108), Expect = 9e-16
Identities = 151/211 (72%), Gaps = 7/211 (3%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| | || || || ||||| || || || || ||||| || || | ||
Sbjct 6377 ATGCAGATCTTCGTCAAGACCCTGACCGGCAAGACCATCACCCTCGAGGTTGAGTCTTCC 6436
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || ||||| || ||||| || || || || ||||| ||
Sbjct 6437 GACACTATCGACAACGTCAAGTCCAAGATTCAGGACAAGGAGGGCATCCCCCCCGACCAG 6496
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACA---TGTCAGATTAT 24880
||||| ||||| || ||||| || ||||| ||||| || || || | || |||||
Sbjct 6497 CAACGCTTGATTTTCGCCGGCAAGCAGCTTGAGGA--CG-GACGCACTCTCTCTGATTAC 6553
Query 24881 AACATTCAAAAGGAATCGACACTACA-CTTG 24910
|||||||| ||||| || || || || ||||
Sbjct 6554 AACATTCAGAAGGAGTCCACTCTTCATCTTG 6584
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449880959412520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |