Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20fujikuroi_20[genbank_20GCA_5F001023065.1_202015-06-09] 2,959 sequences; 43,499,819 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq1446 96.9 3e-14 seq1751 95.1 9e-14 >seq1446 Length=10063 Score = 96.9 bits (106), Expect = 3e-14 Identities = 280/429 (65%), Gaps = 3/429 (1%) Strand=Plus/Plus Query 281380 ATTAGTAATAGTAATATTCTTGGATTTGTTTGTTGATTTATCAGCGGCAGTCACATTAAG 281439 ||| ||||| ||| || ||||| ||| || || || |||| | || || | Sbjct 4716 ATTGGTAATGACAATCTTGTTGGACTTGCCAGTGCCCTTCTCGACGGCGGAGACGTTCAT 4775 Query 281440 AATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGG 281499 ||||| |||||||| | ||| || ||||| |||||||| || || || | | ||||| Sbjct 4776 GATACCGTTGGCATCAAGATCGAAGGTGACCTCAATTTGGGGAACACCACGGGGGGCAGG 4835 Query 281500 TGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTC 281559 ||||| || | | || | |||| || || || || ||| || || || Sbjct 4836 AGGGATACCAGTGAGCTCGAACTTGCCCATGAGGTTGTTGTCCTTGGTGCGTTGACGCTC 4895 Query 281560 ACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTCT 281619 ||||||| | | |||||| ||| ||| || || || || | || | || || Sbjct 4896 ACCCTCGTAGACCTGGATAAGAACACCAGGCTGGTTGTCGGAGAAGGTGGAGAAGACCTC 4955 Query 281620 GGATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCAGC 281679 ||| || || ||| || || ||||| | |||| |||||||| ||||||||||| Sbjct 4956 GGACTTCTTGGTAGGGATGGTGGTGTTGCGGGGGATAAGCTTGGTCATCATACCACCAGC 5015 Query 281680 TGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATAT--TTTGAAGTTTT 281737 || || | ||| ||||| ||||| | |||||| | || | || | || | | || Sbjct 5016 GGTCTCGATACCGAGAGAGAGAGGGGCGACATCGAGAAGCAGGATCTCGTTGGTGGCCTT 5075 Query 281738 TCATCA-GTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTC 281796 | | || | ||| ||||| || || || | |||||||| || |||||||| || Sbjct 5076 GCTGGAGGTGTCACCTGAGAGAATCGCGGCCTGGACGGCAGCACCGTAGGCAACAGCCTC 5135 Query 281797 ATCAGGATT 281805 ||| || || Sbjct 5136 ATCGGGGTT 5144 >seq1751 Length=10252 Score = 95.1 bits (104), Expect = 9e-14 Identities = 94/122 (77%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 432288 GGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAGCGTGTCGATATGTCTGCACGT 432347 ||||| || |||||| || | || || |||||||| ||||||||||| | || |||||| Sbjct 1109 GGTAAGGAGGGTCGTCTTCGTGGTAACTTGATGGGCAAGCGTGTCGACTTTTCGGCACGT 1050 Query 432348 ACAGTTATTACTTCTGATCCTAATATTGCTCTCAATGAAGTTGGTGTTCCTCTCATTATT 432407 || || |||||| |||| | || || |||| | || |||||||| |||| || |||| Sbjct 1049 ACTGTCATTACTGGTGATGCCAACCTTTCTCTACACGAGGTTGGTGTCCCTCGCAGTATT 990 Query 432408 GC 432409 || Sbjct 989 GC 988 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740485125604734