Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20fujikuroi_20[genbank_20GCA_5F001023065.1_202015-06-09] 2,959 sequences; 43,499,819 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq338 105 2e-17 >seq338 Length=10966 Score = 105 bits (116), Expect = 2e-17 Identities = 147/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || || || ||||| || |||||| | || || || | |||||| |||| Sbjct 7130 AAGACTCTGACTGGAAAGACCATCACTCTTGAGGTTGAGTCTAGTGACACTATCGACAAC 7189 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| |||||||| || || || || || || || || | ||||||||| Sbjct 7190 GTGAAGAGCAAGATTCAGGATAAGGAGGGTATCCCCCCTGATCAGCAGCGTCTTATCTTC 7249 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || || ||||||||||||||||| | || ||| ||| |||||| ||||||| ||||| Sbjct 7250 GCTGGTAAGCAGTTGGAAGATGGTCGCACCTTGAGCGACTACAACATCCAGAAGGAGTCA 7309 Query 206365 ACTCTTCACCTTGTTTTGAGACTTCG 206390 ||||| ||||| ||| | ||||||| Sbjct 7310 ACTCTCCACCTCGTTCTCCGACTTCG 7335 Score = 86.0 bits (94), Expect = 1e-11 Identities = 82/105 (78%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 204752 CGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTC 204811 ||||||| | ||| ||||| ||||| ||||| ||||||| || ||||| ||| || Sbjct 7335 CGAAGTCGGAGAACGAGGTGGAGAGTTGACTCCTTCTGGATGTTGTAGTCGCTCAAGGTG 7276 Query 204812 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTGA 204856 | |||||||||| |||||| || ||||||||||| || || ||| Sbjct 7275 CGACCATCTTCCAACTGCTTACCAGCGAAGATAAGACGCTGCTGA 7231 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181775994588239