Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20fujikuroi_20[genbank_20GCA_5F001023065.1_202015-06-09] 2,959 sequences; 43,499,819 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq362 104 7e-17 >seq362 Length=14512 Score = 104 bits (114), Expect = 7e-17 Identities = 348/531 (66%), Gaps = 17/531 (3%) Strand=Plus/Plus Query 443349 GAGGAGATTGATCTCTCCAAGGACTTGGCCGATTGGAACGAACGACTATCTAGCCATGAA 443408 ||||||||||| ||||| ||||| | ||| |||||| | || || || | |||| Sbjct 11409 GAGGAGATTGACCTCTCTAAGGATCTCCACGACTGGAACAACCGCCTGACTGCCGATGAG 11468 Query 443409 CGCGATTTCTTCAAATG---CATCTTGGCCTTCTTTGCACCGAGCGACGGTATCGTCGGT 443465 | | |||||| | |||| | || ||||| || | || ||||| ||| Sbjct 11469 C---AGTTCTTCGTCTCTCACATCCTTGCTTTCTTCGCTGCCTCTGATGGTATTGTCAAC 11525 Query 443466 GAGAATCTGGTGACGCGTTTCTACGAAATGGTAGTGTACACCGAGGCCCGCTACTTCTAC 443525 ||||| || || ||| ||| | ||| | | ||||||| || | |||||| Sbjct 11526 GAGAACCTCGTCGAGCGATTCAGTGGCGAGGTCCAGATCCCCGAGGCTCGTTGTTTCTAC 11585 Query 443526 GCGTTCCAAGCCGCAATGGAGAACATTCACGCCGAGGTCTACAGTCAGTTGATCAAGACA 443585 | ||||| | ||||||||||||||| ||||| |||| | | ||| | || Sbjct 11586 GGCTTCCAGATCATGATGGAGAACATTCACTCCGAGACCTACTCCCTCCTCATCGACAC- 11644 Query 443586 CTAATTCCGAACGAAGACGAACAGCGGTCC-ATCTTCTCATCGTTCAT---GACCACGCC 443641 ||| || || || || ||||| || | ||| ||| || ||| ||||| || Sbjct 11645 CTATATC--AAGGAGCCCGCCCAGCGAACCTACCTTTTCAACGC-CATTGAGACCATTCC 11701 Query 443642 AGGCATCACTGAAAAGACTCGCTGGGCAAAACAGTGGCTCGAACGAGAAAATCTCAGC-T 443700 ||||| | ||| || |||||| | | ||| || || || || ||| | | Sbjct 11702 CTGCATCCGAAAGAAGGCTGACTGGGCCATCCGATGGATCCAA-GATAAGGACTCTTCCT 11760 Query 443701 TCGTCGAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTTTA 443760 | | | | || || || ||||| |||| || || || | || || || || || || Sbjct 11761 TTGCCCAACGCCTCGTTGCTTTCGCTGCCGTTGAGGGTATCTTCTTCAGTGGT-GCCTTC 11819 Query 443761 GCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACGAA 443820 |||||||| |||||| | || |||||||| || |||| ||||||||||| |||||| Sbjct 11820 GCCTCCATTTTCTGGCTCAAGAAGCGTGGTCTCATGCCTGGTCTGACCTTCTCTAACGAG 11879 Query 443821 CTGATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCTCTAC 443871 || ||| ||| ||||||||| | || ||||| ||||| || ||| || Sbjct 11880 CTCATCTCTCGTGACGAGGGTCTTCACACTGACTTTGCCTGCCTCCTCCAC 11930 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588275782707755