Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20fujikuroi_20[genbank_20GCA_5F002196585.1_202017-06-16] 1,359 sequences; 49,118,876 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq472 95.1 1e-14 >seq472 Length=3275154 Score = 95.1 bits (104), Expect = 1e-14 Identities = 145/204 (71%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 48524 TGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCA-ATTGTCGCTCGTCCTCCAGCTG 48582 ||||| || |||||| |||||||||||||||| | | || || ||||||| ||||| Sbjct 2258638 TGAAGAGTAGACTCCTTCTGAATGTTGTAATCAGAGAGAGTG-CGGCCGTCCTCAAGCTG 2258580 Query 48583 CTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTT 48642 ||| ||| || |||| || || ||||| || || | | ||||||||| ||| || Sbjct 2258579 CTTGCCGGCGAAAATCAAGCGTTGCTGGTCAGGGGGAATGCCCTCCTTGTCCTGAATCTT 2258520 Query 48643 CTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGT 48702 ||||| | | || || |||| |||||| ||||| || ||||| || ||||| Sbjct 2258519 GGACTTGACATTGTCGATAGTGTCGGAAGACTCAACCTCGAGGGTGATGGTCTTGCCGGT 2258460 Query 48703 GAGAGTTTTCACAAAAATCTGCAT 48726 | || || || || |||||||| Sbjct 2258459 CAAGGTCTTGACGAAGATCTGCAT 2258436 Score = 89.7 bits (98), Expect = 4e-13 Identities = 144/205 (70%), Gaps = 4/205 (2%) Strand=Plus/Minus Query 48524 TGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGC 48583 ||||| || |||||| || |||||||| || ||| || | || |||| |||| Sbjct 2259376 TGAAGAGTTGACTCCTTCTGGATGTTGTAGTCGCTCAAGGTGCGACCATCTTCCAACTGC 2259317 Query 48584 TTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTC 48643 ||||| || | || | |||||||||||| || | || ||||||||| ||| || Sbjct 2259316 TTACCAGCGAAGATAAGACGCTGCTGATCAGGGGGAATACCCTCCTTGTCCTGAATCTTG 2259257 Query 48644 TGCTTGA--TAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGG 48701 ||| | | | || || || || | ||||| ||| | || ||||| || |||| Sbjct 2259256 CTCTTCACGTTGTCGATA--GTGTCACTGGACTCGACCTCAAGGGTGATGGTCTTTCCGG 2259199 Query 48702 TGAGAGTTTTCACAAAAATCTGCAT 48726 ||||||| ||||||||||||||||| Sbjct 2259198 TGAGAGTCTTCACAAAAATCTGCAT 2259174 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421244222895359