Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20fujikuroi_20[genbank_20GCA_5F002196585.1_202017-06-16] 1,359 sequences; 49,118,876 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq694 228 1e-54 seq948 147 3e-30 >seq694 Length=1559318 Score = 228 bits (252), Expect = 1e-54 Identities = 1133/1782 (64%), Gaps = 39/1782 (2%) Strand=Plus/Minus Query 111611 CCCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGT 111670 ||| ||| ||||| ||||||| || | | ||||| || || ||||| || || Sbjct 751511 CCCTCAGCACATGATCATGCGTGTGTCTGTTGGTATTTGGGGTGATGATATCGAGCGAGT 751452 Query 111671 TTTGGAGACATACGACAAGATGTCCCGTGGTATGTTCATCCACGCAACACCAACCCTCTT 111730 |||||||||||| || ||||||| | | |||| || || | || || ||||| Sbjct 751451 CTTGGAGACATACAACCTGATGTCCAGCAAATTCTTCACACATGCCTCTCCCACGCTCTT 751392 Query 111731 CAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGA 111790 |||||| || || || |||||| |||| ||| ||| | ||| | ||||| || Sbjct 751391 CAACGCCGGCACCCCTCAGCCCCAATTGTCATCTTGCTTCTTGGTTGATATGAAGGACGA 751332 Query 111791 TTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGG 111850 || | || || |||| ||||||| |||||| ||||| ||| |||||| Sbjct 751331 CAGTATTGAGGGAATCTACGATACTCTCAAGACCTGTGCCATGATCTCCAAGATGGCTGG 751272 Query 111851 TGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTAT-TAGA-GGTACA 111908 |||||| || || || | || | || | || | | ||| || | | ||||| Sbjct 751271 TGGTATTGGCCTGAACGTGCACCGTATCCGTGCTACT--GGCTCCTACATCGCCGGTACC 751214 Query 111909 AATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTAT 111968 || ||| ||| | ||| || |||| |||||||| || || ||| ||| || |||||| Sbjct 751213 AACGGTACATCGAACGGTGTTGTTCCTATGCTTCGTGTCTTCAACAACACTGCTCGCTAT 751154 Query 111969 GTAAACCAAGCTGG------GCGTCGCAAGGGATCTATCGCAGTCTATCTTGAGCCATGG 112022 || |||| | ||| ||| | | || || | || |||| || ||||| ||| Sbjct 751153 GTCGACCAGGGTGGCAACAAGCGACCC---GGTGCTTTTGCCATCTACCTCGAGCCTTGG 751097 Query 112023 CACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGG 112082 ||| | ||| || | ||||||||||| | ||| ||||| ||| | ||||||| || Sbjct 751096 CACTCTGATGTCTTCGAGTTCCTTGATCTCCGTAAGAACCACGGTAAAGAGGAGGTCCGT 751037 Query 112083 TGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAG 112142 ||| || || ||| ||| || ||||| || ||||| ||||||||| | ||||| || Sbjct 751036 GCCCGTGACCTTTTCCTCGCCCTTTGGATCCCTGATCTTTTCATGAAGCGTGTTGAAAAG 750977 Query 112143 AGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGGGT 112202 | ||| | ||| | || | || || || || || || ||| |||| | || Sbjct 750976 AACGGCGACTGGACGCTGATGTGCCCCAACGAGTGCCCTGGCCTCGCCGACTGCTACGGA 750917 Query 112203 GAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGC--GACGG 112260 |||||||| || || || ||| ||||||||| |||| | | | | | | || ||| Sbjct 750916 GAGGAGTTCGAGGCTCTGTACGAAAAGTACGA-GAAGGAGGGCAAGGGTC-GCAAGACTA 750859 Query 112261 TGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCAT 112320 | ||| | | ||| | || ||||| || | || || ||||| || | |||| Sbjct 750858 TCAAGGCTCAGAAACTTTGGTACGCCATTCTTGAGGCCCAGACTGAGACCGGAAACCCAT 750799 Query 112321 ATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCA 112380 ||||| ||||| || ||||| |||| ||||| || |||||||| | ||| ||| Sbjct 750798 TCATGCTCTACAAGGATGCCTGCAACCGCAAGAGCAACCAAAAGAACCTCGGTACCATCC 750739 Query 112381 AGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGT 112440 || |||||||| || || ||||| | || | | | || ||| ||||| | Sbjct 750738 GAAGCTCCAACCTGTGCACTGAAATTATTGAGTACTGTGCCCCTGACGAGGTCGCTGTCT 750679 Query 112441 GTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTT---- 112496 | ||||| || || | ||||| ||| | | | || || || | || || Sbjct 750678 GCAACCTTGCCTCTCTGGCTCTGCCC---TCT-TTCAT-CAACTACGATGAGGCTTGCTA 750624 Query 112497 -GATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTAT 112555 || | | || | ||| | || | | ||| | ||||| |||| | || Sbjct 750623 CGACTTCAAGAAGTTGCACAAGGTCAGTCAGGTTGTTATTCGCAACCTGAACAAGATCAT 750564 Query 112556 TGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAAT 112615 ||| || ||||| || || ||||| || ||| ||| | ||||| || || Sbjct 750563 CGATGTGAACCACTACCCTGTCCAGGAGGCTCGCAACAGTAACATGCGCCACCGACCCAT 750504 Query 112616 TGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCATT-CTTTGTCGCCACGCATTTGATT 112674 |||||| ||||| || || || || |||| ||| || || || ||| | || || | Sbjct 750503 TGGTCTTGGTGTTCAGGGCCTTGCCGATGCTTTCCTTGCTCTG-CGCATGCCCTTCGAGT 750445 Query 112675 CCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCTTG 112734 | ||| || || |||| || || || ||||| || || ||||| || || Sbjct 750444 CACCCGAGGCTCGTGAGCTCAACAAGCAGATCTTCGAGACCATTTACCACGCTGCCCTCA 750385 Query 112735 AGGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAG 112794 || | || |||| ||| || ||||| || ||||| | ||||| || | Sbjct 750384 CTGCCTCCGTGCAGCTGGCTAAGGAGGAGGGTCCCTACTCCACCTTCAAAGGTTCCCCCG 750325 Query 112795 CTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTTCACTACGACT 112854 | || | || | || || || || |||||| | | || || | || |||| Sbjct 750324 CCTCTGAGGGTATCCTCCAGTTCGACATGTGGAACGTCAAGCCCTCTGACCTCTGGGACT 750265 Query 112855 GGGACGCTC-TCAAG-GAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGC 112912 |||| ||| || || | | | ||||| | || | ||||||||||| | | || Sbjct 750264 GGGAGACTCTTCGAGAGGAAG--TCAAGACACACGGCATCCGTAACAGTCTGCTCCTTGC 750207 Query 112913 ACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTA 112972 || ||||| || ||| ||| | || || |||| || || || ||||| || ||||| Sbjct 750206 TCCTATGCCTACTGCCAGTACCTCCCAGATTCTGGGCAACAACGAGTGCTTCGAGCCCTA 750147 Query 112973 CACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAACAAGCA 113032 ||| | |||||||| | || | ||||| || ||||| | |||||||| Sbjct 750146 CACCTCCAACATCTACCAACGACGTGTTCTCGCTGGTGAGTTCCAGGTTGTCAACCCCTG 750087 Query 113033 TCTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTCATGGT 113092 || | | ||||| || || ||||| |||||| | | ||||||| | | ||| | Sbjct 750086 GCTGCTCAAGGACCTTGTCGACATGGGTCTGTGGTCCGATGCTATGAAGAACCGCATCAT 750027 Query 113093 GAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAGATGAAATTAAGAAGTTGTA 113152 | | |||||||||||| || ||| | || || | || | ||| |||| Sbjct 750026 TGCTGAGAATGGTTCCATTCAGAACATTCCCAACATCCCTGCCGATGTCAAGGCTCTGTA 749967 Query 113153 CCGCACAGTTTGGGAAATCAAGATGAAGGATGTCATTGACATGGCCGCAGATCGTGGTCG 113212 || |||||||| ||| | | ||| || | ||||| || ||||| ||| Sbjct 749966 TAAGACCGTTTGGGAGATCTCTCAGCGCCAAGTCGTTCAGATGGCTGCTGATCGAGGTGC 749907 Query 113213 CTTCATTGATCAAAGTCAAAGT--ATGAATCTATTCATGGAAAGTCCAACGATGTCCAAG 113270 ||||||||||| |||| ||| |||| | |||| | || |||||| |||| Sbjct 749906 CTTCATTGATC--AGTCCCAGTCACTGAACATCCACATGAAGGACCCCACGATGGGCAAG 749849 Query 113271 CTCTCTTCTATGCACATGTACA-GTTGGAAGAAGGGTCTCAAAACGGGGATGTATTACCT 113329 || | ||||||| | | || | |||||| || ||||| || || ||||| ||||| Sbjct 749848 ATCACCAGTATGCAC-TTTGCAGGCTGGAAGCTTGGCCTCAAGACTGGCATGTACTACCT 749790 Query 113330 CCGATCTAAGGCAAAGGCGCGCCCAATTCAGTTCAGTCTTGA 113371 || | |||| || || |||||||||| | |||| Sbjct 749789 TCGTACACAGGCTGCTGCTGCTCCTATTCAGTTCACTGTTGA 749748 >seq948 Length=183984 Score = 147 bits (162), Expect = 3e-30 Identities = 180/243 (74%), Gaps = 2/243 (1%) Strand=Plus/Minus Query 102090 CTCTTTGAAGCCATCCAAACAGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAG 102149 |||||| | ||||| | || | || || || | |||||| || || ||||| || Sbjct 70495 CTCTTTAACGCCATTGAGACCATCCCCTGCATCCGAAAGAAGGCCGACTGGGCCATCCGA 70436 Query 102150 TGGTTTGAT-ACAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGA 102208 ||| | | | || | | | | ||||||| |||| ||| | || || || |||||| Sbjct 70435 TGGATCCAGGATAAGGACTCCT-CCTTTGCCCAGCGTCTCGTTGCTTTCGCTGCTGTTGA 70377 Query 102209 GGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCAT 102268 ||||||||||||| |||| ||||| | |||| | |||||||||||||| |||||||| Sbjct 70376 GGGTATCTTCTTCAGTGGTGCCTTCGCCTCTATCTTCTGGCTCAAGAAGCGTGGTCTCAT 70317 Query 102269 GCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTT 102328 ||| ||||| ||||||||||||||| ||||||||||| ||||| || ||| || || Sbjct 70316 GCCCGGTCTGACCTTCTCCAACGAGCTCATCTCTCGTGATGAGGGTCTTCACACTGACTT 70257 Query 102329 TGC 102331 ||| Sbjct 70256 TGC 70254 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620731855138480